NCBI Taxonomy id Scientific name No of proteins No of proteins with annotation % of proteins with annotation 139 Borrelia burgdorferi 4262 965 0.23 197 Campylobacter jejuni 3936 2494 0.63 340 Xanthomonas campestris pv. campestris 4260 2612 0.61 375 Bradyrhizobium japonicum 8994 5178 0.58 394 Sinorhizobium fredii NGR234 6433 4057 0.63 491 Neisseria meningitidis serogroup B 2083 1188 0.57 519 Bordetella parapertussis 4217 2791 0.66 520 Bordetella pertussis 3523 2282 0.65 536 Chromobacterium violaceum 4438 2674 0.60 542 Zymomonas mobilis 2024 1364 0.67 623 Shigella flexneri 5431 3597 0.66 632 Yersinia pestis 6138 3372 0.55 633 Yersinia pseudotuberculosis 4521 2731 0.60 666 Vibrio cholerae 5899 3659 0.62 670 Vibrio parahaemolyticus 5741 3354 0.58 672 Vibrio vulnificus 5084 3250 0.64 777 Coxiella burnetii 2117 1154 0.55 813 Chlamydia trachomatis 2713 1695 0.62 844 Wolinella succinogenes 2056 1354 0.66 882 Desulfovibrio vulgaris str. Hildenborough 3519 1940 0.55 883 Desulfovibrio vulgaris str. 'Miyazaki F' 3187 2054 0.64 915 Nitrosomonas europaea 2408 1524 0.63 1097 Chlorobaculum tepidum 2286 1323 0.58 1140 Synechococcus elongatus PCC 7942 2853 1647 0.58 1299 Deinococcus radiodurans 3102 1764 0.57 1309 Streptococcus mutans 2410 1572 0.65 1313 Streptococcus pneumoniae 6081 4534 0.75 1351 Enterococcus faecalis 4669 2393 0.51 1392 Bacillus anthracis 6823 3398 0.50 1423 Bacillus subtilis 5575 3625 0.65 1488 Clostridium acetobutylicum 3888 2352 0.60 1502 Clostridium perfringens 4197 2505 0.60 1513 Clostridium tetani 2425 1550 0.64 1639 Listeria monocytogenes 6658 3742 0.56 1642 Listeria innocua 3177 1958 0.62 1717 Corynebacterium diphtheriae 2338 1382 0.59 1718 Corynebacterium glutamicum 4531 2526 0.56 1765 Mycobacterium bovis 4008 2362 0.59 1769 Mycobacterium leprae 2327 1241 0.53 1770 Mycobacterium avium subsp. paratuberculosis 4492 2765 0.62 1773 Mycobacterium tuberculosis 6136 3598 0.59 1902 Streptomyces coelicolor 8227 4827 0.59 2336 Thermotoga maritima 1888 1276 0.68 2371 Xylella fastidiosa 3123 1528 0.49 2734 Symbiobacterium thermophilum 3315 2002 0.60 2880 Ectocarpus siliculosus 16429 6802 0.41 3055 Chlamydomonas reinhardtii 15107 6319 0.42 3067 Volvox carteri 14446 5701 0.39 3694 Populus trichocarpa 44193 22388 0.51 3702 Arabidopsis thaliana 55315 31603 0.57 3988 Ricinus communis 31454 14941 0.48 4558 Sorghum bicolor 33827 16487 0.49 5660 Leishmania braziliensis 8216 3511 0.43 5664 Leishmania major 8328 3533 0.42 5671 Leishmania infantum 8243 3513 0.43 5693 Trypanosoma cruzi 12520 4831 0.39 5722 Trichomonas vaginalis 50499 11090 0.22 5759 Entamoeba histolytica 8396 3870 0.46 5762 Naegleria gruberi 15732 6423 0.41 5786 Dictyostelium purpureum 12353 5043 0.41 5811 Toxoplasma gondii 19252 7079 0.37 5823 Plasmodium berghei ANKA 11662 2366 0.20 5825 Plasmodium chabaudi 14689 2696 0.18 5851 Plasmodium knowlesi strain H 5102 2038 0.40 5865 Babesia bovis 4124 1635 0.40 5874 Theileria annulata 4170 1649 0.40 5875 Theileria parva 4182 1591 0.38 5888 Paramecium tetraurelia 39936 14473 0.36 6183 Schistosoma mansoni 12686 5839 0.46 6238 Caenorhabditis briggsae 21792 8108 0.37 6239 Caenorhabditis elegans 24302 11307 0.47 6279 Brugia malayi 11559 5128 0.44 6334 Trichinella spiralis 16259 5671 0.35 6945 Ixodes scapularis 21118 9328 0.44 7070 Tribolium castaneum 17002 8091 0.48 7159 Aedes aegypti 16999 9638 0.57 7165 Anopheles gambiae 15863 9100 0.57 7176 Culex quinquefasciatus 19010 10246 0.54 7209 Loa loa 16308 5545 0.34 7217 Drosophila ananassae 15296 7317 0.48 7220 Drosophila erecta 15111 7080 0.47 7222 Drosophila grimshawi 14793 7106 0.48 7227 Drosophila melanogaster 36427 20176 0.55 7230 Drosophila mojavensis 14922 6992 0.47 7234 Drosophila persimilis 16859 7299 0.43 7238 Drosophila sechellia 16362 7448 0.46 7240 Drosophila simulans 18801 8648 0.46 7244 Drosophila virilis 14916 7229 0.48 7245 Drosophila yakuba 17248 7904 0.46 7260 Drosophila willistoni 15560 7304 0.47 7425 Nasonia vitripennis 306 231 0.75 7719 Ciona intestinalis 21006 10888 0.52 7739 Branchiostoma floridae 29216 14559 0.50 7955 Danio rerio 55536 36121 0.65 8364 Xenopus (Silurana) tropicalis 30546 19012 0.62 9031 Gallus gallus 27053 16713 0.62 9103 Meleagris gallopavo 16031 9459 0.59 9258 Ornithorhynchus anatinus 26916 16509 0.61 9305 Sarcophilus harrisii 22510 12982 0.58 9483 Callithrix jacchus 42151 24291 0.58 9541 Macaca fascicularis 24233 12324 0.51 9544 Macaca mulatta 51666 28150 0.54 9595 Gorilla gorilla gorilla 27367 15570 0.57 9598 Pan troglodytes 4408 2568 0.58 9606 Homo sapiens 117995 61810 0.52 9615 Canis lupus familiaris 28063 17278 0.62 9646 Ailuropoda melanoleuca 35659 21763 0.61 9785 Loxodonta africana 25787 15884 0.62 9796 Equus caballus 24031 15503 0.65 9823 Sus scrofa 26249 16994 0.65 9913 Bos taurus 33658 22119 0.66 9986 Oryctolagus cuniculus 25898 16046 0.62 10029 Cricetulus griseus 24421 12537 0.51 10090 Mus musculus 77140 59454 0.77 10116 Rattus norvegicus 41625 27661 0.66 10228 Trichoplax adhaerens 11585 6165 0.53 10243 Cowpox virus 2187 692 0.32 10244 Monkeypox virus 619 224 0.36 10246 Vaccinia virus LC16MO 2 2 1.00 10247 Vaccinia virus WR 65-16 1 0 0.00 10248 Vaccinia virus LC16M8 2 1 0.50 10249 Vaccinia virus Copenhagen 258 74 0.29 10250 Vaccinia virus Dairen I 3 1 0.33 10251 Vaccinia virus IHD-J 2 1 0.50 10252 Vaccinia virus Lister 2 1 0.50 10253 Vaccinia virus Tian Tan 239 64 0.27 10254 Vaccinia virus WR 257 80 0.31 10259 Orf virus (strain NZ2) 7 4 0.57 10272 Rabbit fibroma virus (strain Kasza) 153 53 0.35 10280 Molluscum contagiosum virus subtype 1 261 58 0.22 10281 Molluscum contagiosum virus subtype 2 3 2 0.67 10298 Human herpesvirus 1 2875 1352 0.47 10299 Herpes simplex virus (type 1 / strain 17) 73 29 0.40 10300 Herpes simplex virus (type 1 / strain A44) 1 1 1.00 10301 Herpes simplex virus (type 1 / strain Angelotti) 3 3 1.00 10302 Herpes simplex virus (type 1 / strain CL101) 1 1 1.00 10303 Herpes simplex virus (type 1 / strain HFEM) 6 2 0.33 10304 Herpes simplex virus (type 1 / strain F) 15 7 0.47 10305 Herpes simplex virus (type 1 / strain HZT) 1 1 1.00 10306 Human herpesvirus 1 strain KOS 13 6 0.46 10307 Herpes simplex virus (type 1 / strain MP) 3 1 0.33 10308 Herpes simplex virus (type 1 / strain Patton) 2 1 0.50 10309 Herpes simplex virus (type 1 / strain SC16) 2 2 1.00 10310 Human herpesvirus 2 550 95 0.17 10312 Human herpesvirus 2 strain 186 1 1 1.00 10313 Human herpesvirus 2 strain 333 12 7 0.58 10314 Human herpesvirus 2 strain G 5 4 0.80 10315 Human herpesvirus 2 strain HG52 74 30 0.41 10316 Human herpesvirus 2 strain SA8 2 0 0.00 10323 Bovine herpesvirus type 1.1 (strain Cooper) 73 25 0.34 10325 Macacine herpesvirus 1 187 52 0.28 10333 Equine herpesvirus type 4 (strain 1942) 97 31 0.32 10338 Human herpesvirus 3 strain Dumas 69 29 0.42 10359 Human herpesvirus 5 4457 923 0.21 10360 Human herpesvirus 5 strain AD169 198 27 0.14 10362 Human herpesvirus 5 strain Eisenhardt 1 0 0.00 10363 Human herpesvirus 5 strain Towne 182 31 0.17 10367 Murine cytomegalovirus (strain Smith) 15 7 0.47 10369 Human herpesvirus 6 (strain GS) 14 3 0.21 10370 Human herpesvirus 6 (strain Uganda-1102) 103 22 0.21 10376 Human herpesvirus 4 1771 155 0.09 10377 Human herpesvirus 4 (strain B95-8) 117 38 0.32 10378 Human herpesvirus 4 (strain RAJI) 1 0 0.00 10383 Herpesvirus saimiri (strain 11) 75 25 0.33 10389 Marek's disease herpesvirus type 1 strain MD5 90 27 0.30 10406 Ground squirrel hepatitis virus 5 3 0.60 10409 Hepatitis B virus adr4 5 3 0.60 10410 Hepatitis B virus adw/991 5 3 0.60 10411 Hepatitis B virus alpha1 5 3 0.60 10412 Hepatitis B virus adw/Indonesia/PIDW420 5 3 0.60 10413 Hepatitis B virus adw/Japan/PJDW233 5 3 0.60 10414 Hepatitis B virus LSH/chimpanzee 7 3 0.43 10415 Hepatitis B virus adw/Okinawa/PODW282 5 3 0.60 10419 Hepatitis B virus subtype adyw 3 2 0.67 10421 Hepatitis delta virus (ISOLATE 7/18/83) 2 2 1.00 10422 Hepatitis delta virus (ISOLATE AMERICAN) 2 2 1.00 10423 Hepatitis delta virus (ISOLATE ITALIAN) 2 2 1.00 10424 Hepatitis delta virus (ISOLATE JAPANESE M-1) 2 2 1.00 10425 Hepatitis delta virus (ISOLATE JAPANESE M-2) 2 2 1.00 10426 Hepatitis delta virus (ISOLATE NAURU) 2 2 1.00 10427 Hepatitis delta virus (ISOLATE JAPANESE S-1) 2 2 1.00 10428 Hepatitis delta virus (ISOLATE JAPANESE S-2) 2 2 1.00 10430 Woodchuck hepatitis virus 1 5 3 0.60 10431 Woodchuck hepatitis virus 59 5 3 0.60 10432 Woodchuck hepatitis virus 7 5 3 0.60 10433 Woodchuck hepatitis virus 8 5 3 0.60 10439 Duck hepatitis B virus brown Shanghai duck/S5 4 3 0.75 10440 Duck hepatitis B virus white Shanghai duck/S31 4 3 0.75 10480 Thermoproteus tenax virus 1 (STRAIN KRA1) 37 0 0.00 10498 African swine fever virus BA71V 150 47 0.31 10500 African swine fever virus Malawi LIL 20/1 156 47 0.30 10506 Paramecium bursaria Chlorella virus 1 853 165 0.19 10515 Human adenovirus 2 353 310 0.88 10519 Human adenovirus 7 271 117 0.43 10522 Human adenovirus 35 61 24 0.39 10524 Human adenovirus 41 378 262 0.69 10527 Human adenovirus 9 65 30 0.46 10529 Human adenovirus 31 67 36 0.54 10533 Human adenovirus 1 143 130 0.91 10534 Human adenovirus 6 135 86 0.64 10553 Fowl adenovirus 1 88 27 0.31 10559 Bovine papillomavirus type 1 46 33 0.72 10560 Bovine papillomavirus type 2 38 32 0.84 10561 Bovine papillomavirus 3 9 5 0.56 10562 Bovine papillomavirus type 4 12 5 0.42 10564 Deer papillomavirus 9 7 0.78 10565 European elk papillomavirus 18 9 0.50 10570 Rhesus monkey papillomavirus 1 20 18 0.90 10573 Human papillomavirus type 13 18 14 0.78 10576 Pygmy chimpanzee papillomavirus type 1 8 6 0.75 10579 Human papillomavirus type 8 9 8 0.89 10580 Human papillomavirus type 11 100 82 0.82 10583 Human papillomavirus type 1a 8 6 0.75 10584 Human papillomavirus type 2a 7 6 0.86 10585 Human papillomavirus type 31 301 284 0.94 10586 Human papillomavirus type 33 133 119 0.89 10587 Human papillomavirus type 35 96 88 0.92 10588 Human papillomavirus type 39 54 52 0.96 10589 Human papillomavirus type 41 11 6 0.55 10590 Human papillomavirus type 42 40 38 0.95 10591 Human papillomavirus type 43 12 9 0.75 10592 Human papillomavirus type 44 9 7 0.78 10593 Human papillomavirus type 45 65 57 0.88 10594 Human papillomavirus type 47 8 6 0.75 10595 Human papillomavirus type 51 42 40 0.95 10596 Human papillomavirus type 56 91 87 0.96 10598 Human papillomavirus type 58 476 417 0.88 10599 Human papillomavirus type 5b 13 10 0.77 10600 Human papillomavirus type 6b 9 6 0.67 10601 Human papillomavirus type 6c 3 0 0.00 10602 Human papillomavirus type me180 4 4 1.00 10604 Human papillomavirus type 12 7 7 1.00 10605 Human papillomavirus type 14 7 7 1.00 10606 Human papillomavirus type 15 6 6 1.00 10607 Human papillomavirus type 17 6 6 1.00 10608 Human papillomavirus type 19 8 6 0.75 10609 Human papillomavirus type 25 9 7 0.78 10611 Human papillomavirus type 30 13 13 1.00 10614 Human papillomavirus type 3 9 9 1.00 10615 Human papillomavirus type 40 9 9 1.00 10616 Human papillomavirus type 49 8 8 1.00 10617 Human papillomavirus type 4 9 8 0.89 10618 Human papillomavirus type 52 261 248 0.95 10620 Human papillomavirus type 7 6 6 1.00 10621 Human papillomavirus type 9 7 7 1.00 10625 Budgerigar fledgling disease polyomavirus 154 144 0.94 10626 Hamster polyomavirus 10 10 1.00 10627 Bovine polyomavirus 19 18 0.95 10629 BK polyomavirus 1417 1315 0.93 10631 BK virus strain AS 5 5 1.00 10632 JC polyomavirus 3785 3735 0.99 10633 Simian virus 40 168 110 0.65 10635 Mouse polyomavirus (strain 3) 6 6 1.00 10636 Murine polyomavirus strain A2 5 5 1.00 10637 Mouse polyomavirus (strain Crawford small-plaque) 5 5 1.00 10640 Carnation etched ring virus 23 17 0.74 10644 Cauliflower mosaic virus (STRAIN CM-1841) 6 4 0.67 10645 Cauliflower mosaic virus (STRAIN D/H) 8 4 0.50 10648 Cauliflower mosaic virus (STRAIN STRASBOURG) 6 4 0.67 10650 Figwort mosaic virus (STRAIN DXS) 7 4 0.57 10651 Soybean chlorotic mottle virus 9 4 0.44 10653 Commelina yellow mottle virus 3 1 0.33 10655 Rice tungro bacilliform virus (isolate Philippines) 4 1 0.25 10658 Enterobacteria phage PRD1 61 17 0.28 10661 Pseudoalteromonas phage PM2 21 2 0.10 10665 Enterobacteria phage T4 616 172 0.28 10677 Enterobacteria phage Mu 72 12 0.17 10678 Enterobacteria phage P1 160 34 0.21 10679 Enterobacteria phage P2 99 25 0.25 10680 Enterobacteria phage P4 15 5 0.33 10685 Bacillus phage SPO1 239 33 0.14 10690 Haemophilus phage HP1 41 8 0.20 10710 Enterobacteria phage lambda 140 43 0.31 10719 Streptomyces phage phiC31 64 11 0.17 10726 Enterobacteria phage T5 268 77 0.29 10752 Enterobacteria phage N4 72 8 0.11 10754 Enterobacteria phage P22 151 29 0.19 10756 Bacillus phage phi29 59 13 0.22 10757 Bacillus phage PZA 27 6 0.22 10760 Enterobacteria phage T7 458 77 0.17 10783 Aleutian mink disease parvovirus (STRAIN G) 4 2 0.50 10787 Feline panleukopenia virus (strain 193) 2 2 1.00 10791 Canine parvovirus strain N 2 2 1.00 10793 Mink enteritis virus strain Abashiri 2 2 1.00 10795 Murine minute virus (STRAIN MVMI) 2 2 1.00 10797 Porcine parvovirus NADL-2 2 2 1.00 10799 H-1 parvovirus 4 3 0.75 10808 Aedes densonucleosis virus (STRAIN GKV 002 002) 2 1 0.50 10809 Bombyx mori densovirus 5 0 0.00 10816 Abutilon mosaic virus - [WEST INDIA] 7 5 0.71 10818 African cassava mosaic virus - [West Kenya 844] 8 5 0.63 10822 Maize streak virus - [Kenya] 4 3 0.75 10823 Maize streak virus - [Nigeria] 4 3 0.75 10824 Maize streak virus - [South Africa] 4 3 0.75 10829 Squash leaf curl virus 66 46 0.70 10843 Enterobacteria phage G4 55 12 0.22 10844 Enterobacteria phage S13 21 7 0.33 10847 Enterobacteria phage phiX174 284 78 0.27 10848 Enterobacteria phage phiK 10 4 0.40 10849 Enterobacteria phage alpha3 22 7 0.32 10854 Spiroplasma phage 1-R8A2B 12 1 0.08 10855 Spiroplasma phage 4 9 3 0.33 10857 Chlamydia phage Chp1 8 3 0.38 10863 Enterobacteria phage f1 53 14 0.26 10864 Enterobacteria phage fd 10 4 0.40 10867 Enterobacteria phage Ike 11 4 0.36 10868 Enterobacteria phage If1 10 4 0.40 10870 Enterobacteria phage M13 13 4 0.31 10871 Pseudomonas phage Pf1 27 3 0.11 10872 Pseudomonas phage Pf3 9 4 0.44 10879 Pseudomonas phage phi6 147 26 0.18 10884 Mammalian orthoreovirus 1 Lang 33 21 0.64 10885 Mammalian orthoreovirus 2 D5/Jones 34 16 0.47 10886 Mammalian orthoreovirus 3 Dearing 52 31 0.60 10900 Bluetongue virus (serotype 10 / American isolate) 11 8 0.73 10916 Porcine rotavirus C strain Cowden 11 8 0.73 10933 Bovine rotavirus strain RF 12 9 0.75 10934 Bovine rotavirus strain UK/G6 12 9 0.75 10942 Human rotavirus B 154 9 0.06 10944 Human rotavirus serotype 1 / strain 1076 3 2 0.67 10947 Human rotavirus serotype 1 / strain 69M 12 9 0.75 10948 Human rotavirus (SEROTYPE 2 / STRAIN HU5) 1 0 0.00 10949 Human rotavirus (SEROTYPE G / STRAIN B37) 3 1 0.33 10950 Human rotavirus (SEROTYPE 2 / STRAIN DS1) 12 9 0.75 10951 Human rotavirus (SEROTYPE 2 / STRAIN HN126) 1 0 0.00 10952 Human rotavirus strain KU 12 9 0.75 10953 Human rotavirus (STRAIN L26) 12 9 0.75 10954 Human rotavirus serotype 1 / strain M37 4 2 0.50 10955 Human rotavirus strain MCN13 1 0 0.00 10956 Human rotavirus serotype 1 / strain MO 3 1 0.33 10957 Human rotavirus strain P 12 9 0.75 10959 Human rotavirus (SEROTYPE 2 / STRAIN S2) 7 6 0.86 10960 Human rotavirus G4 strain St. Thomas 3 12 9 0.75 10961 Human rotavirus G4 strain VA70 3 1 0.33 10962 Human rotavirus strain WA 28 9 0.32 10986 Rice gall dwarf virus 48 18 0.38 11003 Infectious pancreatic necrosis virus - Jasper 3 2 0.67 11005 Infectious pancreatic necrosis virus - Sp 53 52 0.98 11008 Saccharomyces cerevisiae virus L-A (L1) 7 2 0.29 11020 Barmah Forest virus 33 33 1.00 11021 Eastern equine encephalitis virus 804 572 0.71 11022 Eastern equine encephalitis virus (STRAIN VA33[TEN BROECK]) 1 1 1.00 11028 O'nyong-nyong virus (strain Gulu) 2 2 1.00 11030 Ross river virus (STRAIN 213970) 1 1 1.00 11031 Ross river virus (STRAIN NB5092) 2 2 1.00 11032 Ross river virus (STRAIN T48) 2 2 1.00 11033 Semliki forest virus 21 20 0.95 11034 Sindbis virus 177 153 0.86 11037 Venezuelan equine encephalitis virus (strain TC-83) 1 1 1.00 11038 Venezuelan equine encephalitis virus (strain Trinidad donkey) 2 2 1.00 11039 Western equine encephalomyelitis virus 103 103 1.00 11043 Rubella virus strain M33 2 2 1.00 11044 Rubella virus vaccine strain RA27/3 2 2 1.00 11045 Rubella virus strain Therien 2 2 1.00 11049 Lelystad virus 8 3 0.38 11057 Dengue virus 1 Thailand/AHF 82-80/1980 1 1 1.00 11058 Dengue virus 1 Jamaica/CV1636/1977 1 1 1.00 11059 Dengue virus 1 Nauru/West Pac/1974 1 1 1.00 11062 Dengue virus 2 Malaysia M2 1 1 1.00 11063 Dengue virus 2 Malaysia M3 1 1 1.00 11064 Dengue virus 2 Jamaica/1409/1983 1 1 1.00 11065 Dengue virus 2 Thailand/NGS-C/1944 1 1 1.00 11066 Dengue virus 2 Puerto Rico/PR159-S1/1969 1 1 1.00 11067 Dengue virus 2 Tonga/EKB194/1974 1 1 1.00 11068 Dengue virus 2 Thailand/PUO-218/1980 1 1 1.00 11073 Japanese encephalitis virus strain SA-14 2 2 1.00 11074 Japanese encephalitis virus strain SA(V) 1 1 1.00 11075 Japanese encephalitis virus strain JAOARS982 1 1 1.00 11076 Japanese encephalitis virus strain Nakayama 3 3 1.00 11078 Kunjin virus (STRAIN MRM61C) 1 1 1.00 11081 St. Louis encephalitis virus (strain MS1-7) 1 1 1.00 11082 West Nile virus 2043 1861 0.91 11086 Louping ill virus 15 14 0.93 11087 Tick-borne encephalitis virus (STRAIN SOFJIN) 1 1 1.00 11088 Tick-borne encephalitis virus (WESTERN SUBTYPE) 1 1 1.00 11090 Yellow fever virus 17D 1 1 1.00 11097 Hog cholera virus (strain Alfort) 1 1 1.00 11098 Classical swine fever virus - Brescia 1 1 1.00 11100 Bovine viral diarrhea virus 1-NADL 2 1 0.50 11104 Hepatitis C virus (isolate 1) 2 2 1.00 11105 Hepatitis C virus (isolate BK) 1 1 1.00 11106 Hepatitis C virus (isolate EC10) 1 0 0.00 11107 Hepatitis C virus (isolate EC1) 1 1 1.00 11108 Hepatitis C virus (isolate H) 2 2 1.00 11109 Hepatitis C virus (isolate HCT27) 1 1 1.00 11110 Hepatitis C virus (isolate HCT18) 1 1 1.00 11111 Hepatitis C virus (isolate HC-J2) 1 1 1.00 11112 Hepatitis C virus (isolate HC-J5) 1 1 1.00 11113 Hepatitis C virus isolate HC-J6 1 1 1.00 11114 Hepatitis C virus (isolate HC-J7) 1 1 1.00 11115 Hepatitis C virus isolate HC-J8 1 1 1.00 11116 Hepatitis C virus (isolate Japanese) 1 1 1.00 11117 Hepatitis C virus (isolate TH) 1 1 1.00 11122 Avian infectious bronchitis virus (strain Beaudette) 10 3 0.30 11127 Avian infectious bronchitis virus (strain M41) 10 3 0.30 11132 Bovine coronavirus Mebus 12 4 0.33 11133 Bovine coronavirus strain Quebec 12 4 0.33 11137 Human coronavirus 229E 111 24 0.22 11142 Murine hepatitis virus strain A59 23 10 0.43 11144 Murine hepatitis virus strain JHM 11 4 0.36 11151 Porcine transmissible gastroenteritis coronavirus strain Purdue 9 3 0.33 11156 Berne virus 9 4 0.44 11162 Mumps virus (STRAIN EDINGBURGH 2) 1 0 0.00 11163 Mumps virus (STRAIN EDINGBURGH 4) 1 0 0.00 11164 Mumps virus (STRAIN EDINGBURGH 6) 1 0 0.00 11165 Mumps virus (STRAIN MATSUYAMA) 1 0 0.00 11166 Mumps virus (STRAIN BELFAST) 1 0 0.00 11167 Mumps virus (STRAIN ENDERS) 3 1 0.33 11168 Mumps virus strain Jeryl Lynn 28 15 0.54 11169 Mumps virus (STRAIN KILHAM) 1 0 0.00 11170 Mumps virus (STRAIN BRISTOL 1) 1 0 0.00 11171 Mumps virus (STRAIN MIYAHARA VACCINE) 8 5 0.63 11172 Mumps virus (STRAIN RW) 3 1 0.33 11173 Mumps virus (STRAIN SBL-1) 7 4 0.57 11174 Mumps virus (STRAIN TAKAHASHI) 1 0 0.00 11175 Mumps virus (STRAIN URABE VACCINE AM9) 1 0 0.00 11195 Sendai virus (strain Fushimi) 11 7 0.64 11198 Sendai virus (Z) 9 6 0.67 11208 Simian virus 5 (strain W3) 8 5 0.63 11210 Human parainfluenza virus 1 (C39) 5 3 0.60 11211 HPIV-1 (human/Washington/1957) 2 2 1.00 11212 Human parainfluenza virus 2 37 28 0.76 11213 Human parainfluenza virus 2 (strain Greer) 1 0 0.00 11214 Human parainfluenza virus 2 (strain Toshiba) 7 5 0.71 11217 Human parainfluenza 3 virus (strain NIH 47885) 7 5 0.71 11218 Human parainfluenza 3 virus (strain AUS/124854/74) 1 1 1.00 11219 Human parainfluenza 3 virus (strain TEX/545/80) 1 1 1.00 11220 Human parainfluenza 3 virus (strain TEX/9305/82) 1 1 1.00 11221 Human parainfluenza 3 virus (strain TEX/12677/83) 1 1 1.00 11222 Human parainfluenza 3 virus (strain WASH/641/79) 1 1 1.00 11223 Human parainfluenza 3 virus (strain WASH/1511/73) 1 1 1.00 11225 Human parainfluenza virus 4a (strain Toshiba) 5 4 0.80 11227 Human parainfluenza virus 4b (strain 68-333) 4 3 0.75 11228 Simian virus 41 9 6 0.67 11233 Canine distemper virus strain Onderstepoort 17 12 0.71 11235 Measles virus strain Edmonston 10 7 0.70 11236 Measles virus strain Halle 5 3 0.60 11237 Measles virus strain IP-3-CA 7 5 0.71 11238 Measles virus strain HU2 1 1 1.00 11239 Measles virus strain Yamagata-1 7 5 0.71 11247 Bovine respiratory syncytial virus ATCC51908 12 5 0.42 11250 Human respiratory syncytial virus 4364 155 0.04 11251 Human respiratory syncytial virus (subgroup B / strain 18537) 8 2 0.25 11252 Human respiratory syncytial virus (strain RSB642) 1 0 0.00 11253 Human respiratory syncytial virus (strain RSB1734) 1 0 0.00 11254 Human respiratory syncytial virus (strain RSB5857) 1 0 0.00 11255 Human respiratory syncytial virus (strain RSB6190) 1 0 0.00 11256 Human respiratory syncytial virus (strain RSB6256) 1 0 0.00 11257 Human respiratory syncytial virus (strain RSB6614) 1 0 0.00 11258 Human respiratory syncytial virus (subgroup B / strain 8/60) 2 0 0.00 11259 Human respiratory syncytial virus A2 13 5 0.38 11260 Human respiratory syncytial virus A strain Long 6 2 0.33 11261 Human respiratory syncytial virus strain RSS-2 1 0 0.00 11273 Chandipura virus I653514 7 4 0.57 11278 Vesicular stomatitis Indiana virus strain Glasgow 5 3 0.60 11279 Vesicular stomatitis Indiana virus strain Mudd-Summers 4 2 0.50 11281 Vesicular stomatitis virus (serotype New Jersey / strain Hazelhurst) 1 1 1.00 11282 Vesicular stomatitis virus (serotype New Jersey / strain Missouri) 2 1 0.50 11283 Vesicular stomatitis virus (serotype New Jersey / strain Ogden) 6 4 0.67 11284 Vesicular stomatitis Indiana virus strain Orsay 1 0 0.00 11285 Vesicular stomatitis Indiana virus strain San Juan 6 4 0.67 11293 Rabies virus AVO1 6 3 0.50 11294 Rabies virus CVS-11 4 2 0.50 11295 Rabies virus ERA 5 3 0.60 11296 Rabies virus HEP-FLURY 5 3 0.60 11297 Rabies virus PM 1 1 1.00 11298 Rabies virus Nishigahara RCEH 5 3 0.60 11300 Rabies virus SAD B19 5 3 0.60 11307 Sonchus yellow net virus 6 3 0.50 11319 Dhori virus (strain Indian/1313/61) 5 2 0.40 11340 Influenza A virus (A/chicken/Japan/24(H7N7)) 2 1 0.50 11375 Influenza A virus (A/Dunedin/4/73(H3N2)) 2 2 1.00 11384 Influenza A virus (A/chicken/FPV/Weybridge(H7N7)) 5 5 1.00 11397 Influenza A virus (A/equine/Cornell/16/74(H7N7)) 7 7 1.00 11418 Influenza A virus (STRAIN A/EQUINE/TOKYO/71) 1 1 1.00 11482 Influenza A virus (STRAIN A/VICTORIA/5/68) 1 1 1.00 11495 Influenza A virus (STRAIN A/SWINE/GERMANY/2/81) 1 1 1.00 11521 Influenza B virus (B/Ann Arbor/1/1986) 13 10 0.77 11522 Influenza B virus (B/Ann Arbor/1/1966 [cold-adapted]) 7 7 1.00 11523 Influenza B virus (B/Ann Arbor/1/1966 [wild- type]) 7 7 1.00 11524 Influenza B virus (STRAIN B/BA/78) 1 1 1.00 11525 Influenza B virus (STRAIN B/BEIJING/1/87) 3 3 1.00 11527 Influenza B virus (STRAIN B/ENGLAND/222/82) 1 1 1.00 11528 Influenza B virus (B/FUKUOKA/80/81) 1 1 1.00 11529 Influenza B virus (B/GA/86) 1 1 1.00 11530 Influenza B virus (STRAIN B/GL/54) 2 2 1.00 11531 Influenza B virus (STRAIN B/HONG KONG/8/73) 4 4 1.00 11532 Influenza B virus (STRAIN B/HT/84) 1 1 1.00 11534 Influenza B virus (STRAIN B/ID/86) 2 2 1.00 11536 Influenza B virus (STRAIN B/LENINGRAD/179/86) 2 2 1.00 11537 Influenza B virus (STRAIN B/MARYLAND/59) 4 4 1.00 11538 Influenza B virus (STRAIN B/MEMPHIS/6/86) 3 3 1.00 11540 Influenza B virus (STRAIN B/NAGASAKI/1/87) 1 1 1.00 11541 Influenza B virus (B/Oregon/5/80) 3 3 1.00 11542 Influenza B virus (STRAIN B/PA/79) 1 1 1.00 11543 Influenza B virus (STRAIN B/RU/69) 1 1 1.00 11545 Influenza B virus (STRAIN B/SINGAPORE/64) 2 2 1.00 11547 Influenza B virus (STRAIN B/VICTORIA/3/85) 3 3 1.00 11548 Influenza B virus (STRAIN B/VICTORIA/87) 1 1 1.00 11550 Influenza B virus (B/Yamagata/1/73) 5 4 0.80 11553 Influenza C virus (C/Ann Arbor/1/50) 10 6 0.60 11554 Influenza C virus (C/Berlin/1/85) 1 1 1.00 11556 Influenza C virus (C/England/892/1983) 1 1 1.00 11557 Influenza C virus (C/Great Lakes/1167/1954) 3 1 0.33 11560 Influenza C virus (C/JJ/1950) 13 8 0.62 11564 Influenza C virus (C/pig/Beijing/10/1981) 1 1 1.00 11566 Influenza C virus (C/PIG/Beijing/439/1982) 1 1 1.00 11567 Influenza C virus (C/Taylor/1233/1947) 4 2 0.50 11568 Influenza C virus (C/Yamagata/10/1981) 5 1 0.20 11577 La Crosse virus 287 123 0.43 11578 La Crosse virus L74 2 0 0.00 11580 Snowshoe hare virus 8 3 0.38 11583 HoJo virus 1 0 0.00 11587 Punta Toro virus 14 5 0.36 11588 Rift Valley fever virus 535 96 0.18 11589 Rift valley fever virus (STRAIN ZH-548 M12) 4 2 0.50 11590 Toscana virus 110 53 0.48 11594 Crimean-Congo hemorrhagic fever virus (isolate C68031) 1 1 1.00 11595 Dugbe virus 86 61 0.71 11601 Hantaan virus Lee 1 0 0.00 11602 Hantaan virus 76-118 3 2 0.67 11605 Puumala virus (STRAIN HALLNAS B1) 3 2 0.67 11610 Seoul virus SR11 2 1 0.50 11619 Junin virus 200 124 0.62 11621 Lassa virus GA391 2 1 0.50 11622 Lassa virus Josiah 4 3 0.75 11624 Lymphocytic choriomeningitis virus (strain Armstrong) 4 3 0.75 11625 Lymphocytic choriomeningitis virus (strain Pasteur) 1 1 1.00 11626 Lymphocytic choriomeningitis virus (strain Traub) 1 1 1.00 11627 Lymphocytic choriomeningitis virus (strain WE) 46 2 0.04 11628 Machupo virus 107 64 0.60 11630 Pichinde virus 22 13 0.59 11644 Simian foamy virus (TYPE 3 / STRAIN LK3) 5 3 0.60 11678 Human immunodeficiency virus type 1 BH10 9 9 1.00 11679 Human immunodeficiency virus type 1 (CLONE 12) 5 5 1.00 11680 Human immunodeficiency virus type 1 (ZAIRE 3 ISOLATE) 4 3 0.75 11681 Human immunodeficiency virus type 1 (Z-84 ISOLATE) 5 4 0.80 11682 Human immunodeficiency virus type 1 (BH5 ISOLATE) 5 5 1.00 11683 Human immunodeficiency virus type 1 (Z2/CDC-Z34 ISOLATE) 9 9 1.00 11684 Human immunodeficiency virus type 1 (BH8 ISOLATE) 4 4 1.00 11685 HIV-1 M:B_ARV2/SF2 9 9 1.00 11686 Human immunodeficiency virus type 1 (BRU ISOLATE) 9 9 1.00 11687 Human immunodeficiency virus type 1 (CDC-451 ISOLATE) 7 7 1.00 11688 Human immunodeficiency virus type 1 (JRCSF ISOLATE) 9 9 1.00 11689 Human immunodeficiency virus type 1 (ELI ISOLATE) 9 9 1.00 11690 Human immunodeficiency virus type 1 (SF33 ISOLATE) 5 5 1.00 11691 Human immunodeficiency virus type 1 (SF162 ISOLATE) 5 5 1.00 11692 Human immunodeficiency virus type 1 (ZAIRE HZ321 ISOLATE) 5 5 1.00 11693 Human immunodeficiency virus type 1 (BRAIN ISOLATE) 5 5 1.00 11694 Human immunodeficiency virus type 1 (JH3 ISOLATE) 7 6 0.86 11695 Human immunodeficiency virus type 1 (NDK ISOLATE) 8 8 1.00 11696 HIV-1 M:B_MN 9 9 1.00 11697 Human immunodeficiency virus type 1 (MAL ISOLATE) 9 9 1.00 11698 Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE) 6 5 0.83 11699 Human immunodeficiency virus type 1 (OYI ISOLATE) 8 8 1.00 11701 Human immunodeficiency virus type 1 (RF/HAT ISOLATE) 9 9 1.00 11702 Human immunodeficiency virus type 1 (SC ISOLATE) 7 7 1.00 11703 Human immunodeficiency virus type 1 (STRAIN UGANDAN / ISOLATE U455) 6 6 1.00 11704 Human immunodeficiency virus type 1 (MFA ISOLATE) 1 1 1.00 11705 Human immunodeficiency virus type 1 (WMJ2 ISOLATE) 5 5 1.00 11706 HIV-1 M:B_HXB2R 9 9 1.00 11707 Human immunodeficiency virus type 1 (HXB3 ISOLATE) 6 6 1.00 11708 Human immunodeficiency virus type 1 (ZAIRE 6 ISOLATE) 6 6 1.00 11713 Human immunodeficiency virus type 2 (ISOLATE D194) 9 6 0.67 11714 Human immunodeficiency virus type 2 (ISOLATE BEN) 9 6 0.67 11715 Human immunodeficiency virus type 2 (ISOLATE CAM2) 9 6 0.67 11716 Human immunodeficiency virus type 2 (ISOLATE D205,7) 9 6 0.67 11717 Human immunodeficiency virus type 2 (ISOLATE GHANA-1) 9 6 0.67 11718 Human immunodeficiency virus type 2 (ISOLATE SBLISY) 9 6 0.67 11719 Human immunodeficiency virus type 2 (ISOLATE NIH-Z) 9 6 0.67 11720 Human immunodeficiency virus type 2 (ISOLATE ROD) 9 6 0.67 11721 Human immunodeficiency virus type 2 (ISOLATE ST) 10 7 0.70 11723 Simian immunodeficiency virus 25978 13644 0.53 11733 Simian immunodeficiency virus (MM142-83 ISOLATE) 9 6 0.67 11737 Simian immunodeficiency virus (F236/SMH4 ISOLATE) (SOOTY MANGABEY) 9 6 0.67 11738 Simian immunodeficiency virus (PBJ/BC13 ISOLATE) (SOOTY MANGABEY) 9 6 0.67 11746 Jaagsiekte sheep retrovirus 50 33 0.66 11759 Mouse mammary tumor virus (STRAIN C3H) 5 4 0.80 11764 Baboon endogenous virus strain M7 5 3 0.60 11787 Radiation murine leukemia virus 3 3 1.00 11791 AKR (endogenous) murine leukemia virus 3 3 1.00 11796 Friend murine leukemia virus (ISOLATE 57) 3 3 1.00 11797 Friend murine leukemia virus (ISOLATE FB29) 3 3 1.00 11798 Friend murine leukemia virus (ISOLATE PVC-211) 3 3 1.00 11840 Gibbon ape leukemia virus 12 12 1.00 11855 Mason-Pfizer monkey virus 8 6 0.75 11856 Squirrel monkey retrovirus 5 4 0.80 11888 Rous sarcoma virus - Prague C 5 3 0.60 11909 Human T-lymphotropic virus 2 316 48 0.15 11926 Human T-cell lymphotrophic virus type 1 (strain ATK) 9 7 0.78 11927 Human T-cell lymphotrophic virus type 1 (Caribbean isolate) 9 7 0.78 11928 Human T-cell lymphotrophic virus type 1 (isolate MT-2) 2 1 0.50 11942 Simian retrovirus 1 6 4 0.67 11963 Human spumaretrovirus 16 6 0.38 11977 Rabbit hemorrhagic disease virus-V351 3 1 0.33 11979 Feline calicivirus (STRAIN CFI/68 FIV) 3 1 0.33 11980 Feline calicivirus (STRAIN JAPANESE F4) 3 1 0.33 11981 Feline calicivirus (STRAIN F9) 3 1 0.33 11988 Turnip crinkle virus 35 34 0.97 12017 Enterobacteria phage fr 5 2 0.40 12018 Enterobacteria phage GA 4 2 0.50 12027 Enterobacteria phage SP 27 21 0.78 12040 Barley yellow dwarf virus-PAV 435 308 0.71 12043 Beet western yellows virus-FL1 6 4 0.67 12046 Potato leafroll virus (STRAIN 1) 9 4 0.44 12048 Potato leafroll virus (STRAIN WAGENINGEN) 8 4 0.50 12055 Tobacco necrosis virus A 16 9 0.56 12060 Human echovirus 9 380 374 0.98 12065 Bovine enterovirus strain VG-5-27 1 1 1.00 12068 Human coxsackievirus A9 (strain Griggs) 1 1 1.00 12070 Human coxsackievirus A21 (strain Coe) 1 1 1.00 12076 Swine vesicular disease virus (STRAIN H/3 '76) 1 1 1.00 12077 Swine vesicular disease virus (STRAIN UKG/27/72) 1 1 1.00 12081 Human poliovirus 1 Mahoney 3 3 1.00 12082 Human poliovirus 1 strain Sabin 33 30 0.91 12084 Poliovirus type 2 strain Lansing 1 1 1.00 12085 Poliovirus type 2 strain W-2 1 1 1.00 12087 Poliovirus type 3 (strain 23127) 1 1 1.00 12088 Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B) 1 1 1.00 12093 Human hepatitis A virus Shanghai/LCDC-1/1984 1 0 0.00 12097 Human hepatitis A virus Hu/Costa Rica/CR326/1960 1 1 1.00 12098 Human hepatitis A virus Hu/Australia/HM175/1976 1 1 1.00 12099 Human hepatitis A virus Hu/Los Angelos/LA/1975 1 1 1.00 12100 Human hepatitis A virus Hu/Northern Africa/MBB/1978 1 1 1.00 12102 Simian hepatitis A virus Cercopithecus/Kenya/AGM-27/1985 1 1 1.00 12104 Encephalomyocarditis virus 106 66 0.62 12105 Encephalomyocarditis virus strain emc-b nondiabetogenic 1 1 1.00 12106 Encephalomyocarditis virus strain emc-d diabetogenic 1 1 1.00 12107 Mengo virus 2 2 1.00 12112 Foot-and-mouth disease virus (strain A10-61) 2 1 0.50 12114 Foot-and-mouth disease virus (strain A12) 1 1 1.00 12125 Theiler's encephalomyelitis virus (STRAIN BEAN 8386) 1 1 1.00 12126 Theiler's encephalomyelitis virus (STRAIN DA) 1 1 1.00 12127 Theiler's encephalomyelitis virus (STRAIN GDVII) 2 2 1.00 12129 Human rhinovirus 1B 3 3 1.00 12130 Human rhinovirus 2 5 5 1.00 12131 Human rhinovirus 14 3 3 1.00 12134 Human rhinovirus 1A 8 8 1.00 12143 Cucumber necrosis virus 12 7 0.58 12144 Cymbidium ringspot virus 8 7 0.88 12147 Tomato bushy stunt virus (STRAIN CHERRY) 4 4 1.00 12151 Eggplant mosaic virus 4 3 0.75 12153 Ononis yellow mosaic virus 3 2 0.67 12154 Turnip yellow mosaic virus 27 25 0.93 12155 Turnip yellow mosaic virus (Australian isolate) 3 2 0.67 12168 Potato virus M (strain Russian) 6 4 0.67 12179 Foxtail mosaic virus 15 11 0.73 12180 Narcissus mosaic virus 7 4 0.57 12181 Papaya mosaic virus 18 7 0.39 12183 Potato virus X 164 139 0.85 12184 Potato virus X (strain CP) 5 3 0.60 12185 Potato virus X (strain X3) 5 3 0.60 12187 Strawberry mild yellow edge virus 67 32 0.48 12189 White clover mosaic virus (strain M) 5 3 0.60 12190 White clover mosaic virus (strain O) 5 3 0.60 12197 Bean yellow mosaic virus 110 45 0.41 12212 Plum pox virus D 2 1 0.50 12213 Plum pox virus (isolate NAT) 2 1 0.50 12214 Plum pox virus (strain Rankovic) 1 1 1.00 12215 Potato virus A 70 27 0.39 12219 Potato virus Y strain N 17 12 0.71 12223 Soybean mosaic virus N 2 1 0.50 12227 Tobacco etch virus 86 47 0.55 12228 Tobacco vein mottling virus 6 5 0.83 12230 Turnip mosaic virus 1019 627 0.62 12236 Cucumber green mottle mosaic virus (watermelon strain SH) 3 3 1.00 12240 Sunn-hemp mosaic virus 3 3 1.00 12241 Tobacco mild green mosaic virus 52 52 1.00 12243 Tobacco mosaic virus (vulgare) 3 3 1.00 12251 Tobacco mosaic virus strain OM 3 3 1.00 12252 Tobacco mosaic virus strain tomato/L 3 3 1.00 12262 Red clover mottle virus 5 5 1.00 12267 Red clover necrotic mosaic virus 9 5 0.56 12273 Grapevine chrome mosaic virus 2 2 1.00 12274 Grapevine fanleaf virus 408 284 0.70 12281 Tomato ringspot virus (isolate raspberry) 4 2 0.50 12301 Broad bean mottle virus 6 5 0.83 12302 Brome mosaic virus 25 17 0.68 12303 Cowpea chlorotic mottle virus 20 16 0.80 12307 Cucumber mosaic virus (strain FNY) 5 3 0.60 12310 Cucumber mosaic virus (strain Q) 6 4 0.67 12315 Tomato aspermy virus 43 32 0.74 12318 Tobacco streak virus (strain WC) 5 3 0.60 12322 Alfalfa mosaic virus (strain 425 / isolate Leiden) 4 3 0.75 12327 Barley stripe mosaic virus 39 26 0.67 12455 Borna disease virus 308 47 0.15 12456 Human astrovirus 1 533 10 0.02 12478 Cryphonectria hypovirus 1-EP713 2 2 1.00 12538 Mokola virus 61 41 0.67 12557 Seoul virus 80-39 2 1 0.50 12701 Human astrovirus 2 69 1 0.01 12968 Blastocystis hominis 5831 2954 0.51 13373 Burkholderia mallei 4842 2867 0.59 13616 Monodelphis domestica 31612 20215 0.64 13642 Polysphondylium pallidum 12451 5259 0.42 13686 Solenopsis invicta 14334 5736 0.40 28276 Human adenovirus 15 58 28 0.48 28280 Human adenovirus 4 236 127 0.54 28282 Human adenovirus 12 42 21 0.50 28284 Human adenovirus 40 80 60 0.75 28285 Human adenovirus 5 174 121 0.70 28292 Sandfly fever sicilian virus 27 12 0.44 28300 Heron hepatitis B virus 11 3 0.27 28311 Human papillomavirus type 63 7 6 0.86 28312 Human papillomavirus type 65 7 6 0.86 28321 Amsacta moorei entomopoxvirus 'L' 279 49 0.18 28354 Plantago asiatica mosaic virus 24 17 0.71 28365 Xanthomonas phage Lf 9 3 0.33 28377 Anolis carolinensis 9333 5501 0.59 28450 Burkholderia pseudomallei 6147 3809 0.62 28877 IDIR agent 8 2 0.25 28901 Salmonella enterica 6241 3897 0.62 29252 Enterobacteria phage 186 45 13 0.29 29272 Turnip vein-clearing virus 10 10 1.00 29390 Streptococcus gordonii str. Challis 2056 1340 0.65 29471 Pectobacterium atrosepticum 4558 2907 0.64 29519 Borrelia garinii 1992 835 0.42 29760 Vitis vinifera 54204 27201 0.50 31234 Caenorhabditis remanei 31838 11219 0.35 31510 Duck hepatitis B virus strain China 5 4 0.80 31512 Hepatitis B virus adr/mutant 4 3 0.75 31513 Hepatitis B virus adr/NC-1 1 0 0.00 31514 Hepatitis B virus adw/Philippino/PFDW294 4 3 0.75 31515 Hepatitis B virus adw2 variant SF 1 1 1.00 31520 Equine herpesvirus type 1 (strain AB4P) 75 25 0.33 31523 Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker) 79 29 0.37 31525 Human herpesvirus 4 (strain CAO) 1 0 0.00 31530 Myxoma virus (strain Lausanne) 159 55 0.35 31531 Vaccinia virus L-IPV 22 9 0.41 31537 Lactococcus phage c2 44 3 0.07 31544 Human adenovirus 16 58 20 0.34 31545 Human adenovirus 8 155 70 0.45 31547 Human papillomavirus type 20 8 7 0.88 31548 Human papillomavirus type 21 9 8 0.89 31553 Papillomavirus sylvilagi (STRAIN KANSAS) 8 6 0.75 31556 Cauliflower mosaic virus (STRAIN BBC) 6 4 0.67 31557 Cauliflower mosaic virus (STRAIN NY8153) 6 4 0.67 31565 Human rotavirus (group C / strain 88-220) 1 0 0.00 31566 Human rotavirus (group C / strain Belem) 1 1 1.00 31567 Human rotavirus (group C / strain Bristol) 11 8 0.73 31568 Human rotavirus (group C / strain Preston) 1 1 1.00 31569 Human rotavirus (serotype 2 / strain RV-5) 3 2 0.67 31570 Human rotavirus 1 strain RV4 2 1 0.50 31571 Rotavirus A human/A28/G10 1 1 1.00 31574 Human rotavirus (strain IGV-80-3) 1 1 1.00 31599 Tobacco yellow dwarf virus (strain Australia) 4 3 0.75 31600 Indian cassava mosaic virus 38 25 0.66 31605 Human parainfluenza virus 1 (C35) 2 1 0.50 31606 Human parainfluenza 1 virus (strain CI-14/83) 2 1 0.50 31607 Human parainfluenza 1 virus (strain CI-5/73) 2 1 0.50 31608 Simian virus 5 (isolate canine/CPI+) 1 1 1.00 31609 Simian virus 5 (isolate canine/CPI-) 1 1 1.00 31610 Simian virus 5 (isolate human/LN) 1 1 1.00 31613 Rabies virus strain Street 1 0 0.00 31617 Hantaan virus B-1 1 0 0.00 31620 Seoul virus R22 1 0 0.00 31631 Human coronavirus OC43 157 34 0.22 31634 Dengue virus 2 Thailand/16681/84 2 2 1.00 31635 Dengue virus 2 16681-PDK53 1 1 1.00 31636 Dengue virus 2 China/D2-04 1 1 1.00 31637 Dengue virus 2 Thailand/TH-36/1958 1 1 1.00 31638 Langat virus (strain TP21) 1 1 1.00 31639 Langat virus (strain Yelantsev) 1 1 1.00 31640 Louping ill virus (strain SB 526) 1 1 1.00 31641 Yellow fever virus 1899/81 1 1 1.00 31642 Hepatitis C virus (isolate HC-JT) 1 1 1.00 31643 Hepatitis C virus (isolate HCV-476) 1 1 1.00 31644 Hepatitis C virus (isolate HCV-KF) 1 1 1.00 31645 Hepatitis C virus (isolate Taiwan) 1 1 1.00 31656 Bovine viral diarrhea virus 1-SD1 1 1 1.00 31658 Cell fusing agent virus 26 20 0.77 31663 Influenza A virus (A/turkey/Bethlehem-Glilit/1492-B/1982(H1N1)) 2 1 0.50 31678 Human immunodeficiency virus type 1 (WMJ1 isolate) 1 1 1.00 31681 Human immunodeficiency virus type 2 (isolate ST/24.1C#2) 1 1 1.00 31699 Ockelbo virus 2 2 1.00 31702 Mengo encephalomyocarditis virus (strain 37A) 1 1 1.00 31705 Echovirus 11 (strain Gregory) 1 1 1.00 31706 Human hepatitis A virus Hu/Georgia/GA76/1976 1 1 1.00 31707 Simian hepatitis A virus Macaca/Philippines/CY-145/1988 1 1 1.00 31708 Human rhinovirus 16 4 4 1.00 31715 Bean-pod mottle virus (strain Kentucky G7) 2 2 1.00 31716 Cowpea severe mosaic virus (strain DG) 2 2 1.00 31728 Barley yellow mosaic virus (German isolate) 2 2 1.00 31729 Barley yellow mosaic virus (Japanese strain II-1) 2 2 1.00 31731 Papaya ringspot virus (strain P / mutant HA) 2 1 0.50 31736 Pea seed-borne mosaic virus (strain DPD1) 2 1 0.50 31737 Pepper mottle virus (California isolate) 2 1 0.50 31739 Potato virus Y strain Hungarian 2 1 0.50 31745 Pepper mild mottle virus (strain Spain) 3 3 1.00 31746 Tobacco mosaic virus strain Korean 3 3 1.00 31749 Obuda pepper virus 3 3 1.00 31757 Mycobacterium phage L5 85 16 0.19 31762 Hepatitis delta virus (ISOLATE D380) 2 2 1.00 31763 Hepatitis delta virus (ISOLATE LEBANON-1) 2 2 1.00 31764 Hepatitis delta virus (isolate woodchuck) 2 2 1.00 31766 Hepatitis E virus (isolate rhesus) 1 1 1.00 31767 Hepatitis E virus (strain Burma) 3 2 0.67 31768 Hepatitis E virus (strain Mexico) 3 2 0.67 31769 Hepatitis E virus (strain Myanmar) 3 2 0.67 31770 Shallot virus X 13 7 0.54 31915 Human enterovirus 70 (strain J670/71) 1 1 1.00 31964 Clavibacter michiganensis subsp. sepedonicus 3089 1845 0.60 32049 Synechococcus sp. PCC 7002 3274 1822 0.56 32051 Synechococcus sp. WH 7803 2540 1409 0.55 32604 Human herpesvirus 6B 143 55 0.38 33722 Human rotavirus (serotype G / strain RK9) 1 0 0.00 33727 Marburg virus - Musoke, Kenya, 1980 7 4 0.57 33728 Lake Victoria marburgvirus - Popp 7 4 0.57 33729 Mumps virus (strain SBL) 5 2 0.40 33730 Simian virus 5 (strain 21004-WR) 1 1 1.00 33734 Feline infectious peritonitis virus (strain 79-1146) 10 2 0.20 33741 Dengue virus 1 Singapore/S275/1990 1 1 1.00 33762 Parsnip yellow fleck virus (isolate P-121) 1 1 1.00 33774 Hepatitis E virus (strain Pakistan) 3 2 0.67 33903 Streptomyces avermitilis 7720 4570 0.59 34765 Oikopleura dioica 29029 11632 0.40 35128 Thalassiosira pseudonana 11819 5239 0.44 35297 Striped Jack nervous necrosis virus 5 1 0.20 35300 Human astrovirus 4 72 7 0.10 35304 Bunyamwera virus 21 10 0.48 35339 LuIII virus 2 2 1.00 35740 Human astrovirus 3 51 6 0.12 35741 Human astrovirus 5 28 3 0.11 36329 Plasmodium falciparum 3D7 5359 2311 0.43 36345 Herpes simplex virus 1 strain R-15 20 0 0.00 36346 Herpes simplex virus (type 1 / strain R19) 1 0 0.00 36351 Human herpesvirus 6 strain Z29 97 23 0.24 36375 Human immunodeficiency virus type 1 (KB-1 isolate) 1 1 1.00 36376 Human immunodeficiency virus type 1 (NIT-A isolate) 1 1 1.00 36382 Venezuelan equine encephalitis virus (strain 3880) 2 2 1.00 36383 Venezuelan equine encephalitis virus (strain Everglades FE3-7C) 1 1 1.00 36384 Venezuelan equine encephalitis virus (strain Mena II) 3 3 1.00 36385 Venezuelan equine encephalitis virus (strain P676) 2 2 1.00 36386 Louping ill virus (strain 31) 1 1 1.00 36387 Louping ill virus (strain K) 1 1 1.00 36388 Louping ill virus (strain Negishi 3248/49/P10) 1 1 1.00 36389 Louping ill virus (strain Norway) 1 1 1.00 36394 Rice stripe virus (isolate T) 7 4 0.57 36396 Turnip mosaic virus (strain Quebec) 2 1 0.50 36402 Apple stem grooving virus (strain P-209) 2 2 1.00 36404 Human coxsackievirus A24 (strain EH24/70) 1 1 1.00 36406 San Miguel sea lion virus 1 3 1 0.33 36408 Measles virus strain AIK-C 14 10 0.71 36409 Rinderpest virus (strain RBOK) 8 6 0.75 36412 Human parainfluenza 1 virus (strains A1426 / 86-315 / 62M-753) 2 2 1.00 36413 Tomato spotted wilt virus (strain Brazilian BR-01) 5 3 0.60 36418 Influenza A virus (A/chicken/Brescia/1902(H7N7)) 19 17 0.89 36449 Tomato mottle virus - [Florida B1] 6 5 0.83 36870 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 612 517 0.84 37106 Herpes simplex virus (type 1 / strain CVG-2) 1 0 0.00 37107 Herpes simplex virus (type 1 / strain MGH-10) 1 0 0.00 37111 Human papillomavirus type 28 7 6 0.86 37112 Human papillomavirus type 29 7 6 0.86 37114 Human papillomavirus type 55 11 10 0.91 37115 Human papillomavirus type 59 52 49 0.94 37116 Human papillomavirus type 61 9 8 0.89 37118 Human papillomavirus type 64 1 1 1.00 37119 Human papillomavirus type 66 178 169 0.95 37120 Human papillomavirus type 67 45 39 0.87 37121 Human papillomavirus type 69 8 6 0.75 37122 Human papillomavirus type 6a 8 6 0.75 37129 Southampton virus (serotype 3) 3 1 0.33 37130 Human astrovirus 6 20 6 0.30 37132 Rabies virus Ontario fox 35 1 0.03 37136 Human rotavirus (strain MC35) 2 0 0.00 37137 Simian rotavirus A/SA11-both 12 9 0.75 37139 Tomato yellow leaf curl virus - [Murcia] 6 3 0.50 37206 Helicoverpa armigera stunt virus 3 1 0.33 37954 Human papillomavirus type 22 8 7 0.88 37955 Human papillomavirus type 23 8 7 0.88 37956 Human papillomavirus type 24 10 9 0.90 37957 Human papillomavirus type 36 11 10 0.91 37958 Human papillomavirus type 37 8 7 0.88 37959 Human papillomavirus type 38 56 55 0.98 38062 Cassava vein mosaic virus 8 3 0.38 38766 Lagos bat virus 78 43 0.55 38767 Duvenhage virus 27 15 0.56 38950 Human astrovirus 7 8 0 0.00 38973 Influenza A virus (A/Memphis/4/1973(H3N2)) 1 1 1.00 38988 Influenza B virus (strain B/finland/145/90) 1 1 1.00 38990 Influenza B virus (strain B/finland/146/90) 1 1 1.00 38991 Influenza B virus (strain B/finland/147/90) 1 1 1.00 38992 Influenza B virus (strain B/finland/148/90) 1 1 1.00 38993 Influenza B virus (strain B/finland/149/90) 1 1 1.00 38994 Influenza B virus (strain B/finland/150/90) 1 1 1.00 38995 Influenza B virus (strain B/finland/151/90) 1 1 1.00 38996 Influenza B virus (strain B/finland/24/85) 1 1 1.00 38997 Influenza B virus (strain B/finland/56/88) 1 1 1.00 38998 Puumala virus (strain berkel) 2 1 0.50 38999 Puumala virus (strain evo/12cg/93) 1 1 1.00 39000 Puumala virus (strain k27) 2 1 0.50 39001 Puumala virus (strain p360) 2 1 0.50 39002 Puumala virus (strain sotkamo/v-2969/81) 3 2 0.67 39003 Puumala virus (strain udmurtia/894cg/91) 2 1 0.50 39005 Rabies virus Ontario skunk 1 1 1.00 39008 Tick-borne powassan virus (strain lb) 1 1 1.00 39011 Human rotavirus serotype 1 / strain a91a 1 0 0.00 39012 Human rotavirus (serotype g1 / strain k8) 4 2 0.50 39013 Human rotavirus AU-1 12 9 0.75 39015 Human T-cell lymphotropic virus type 1 (african isolate) 3 2 0.67 39016 Human T-cell lymphotropic virus type 1 (north american isolate) 1 0 0.00 39068 Simian retrovirus 2 78 9 0.12 39457 Human papillomavirus type 70 19 16 0.84 39720 Walleye dermal sarcoma virus 39 14 0.36 40537 Bovine papillomavirus 5 6 6 1.00 40538 Human papillomavirus type 48 7 6 0.86 40539 Human papillomavirus type 50 7 6 0.86 40540 Human papillomavirus type 60 7 6 0.86 40631 Enterobacteria phage N15 66 13 0.20 41431 Cyanothece sp. PCC 8801 4349 2267 0.52 41514 Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- 4500 2588 0.58 41952 Arctic ground squirrel hepatitis B virus 7 3 0.43 42007 Chinese Rape Mosaic Virus 8 7 0.88 42567 Rotavirus G9 290 33 0.11 42764 Oliveros virus 4 3 0.75 43151 Anopheles darlingi 11653 5286 0.45 43358 Human astrovirus 8 51 5 0.10 43989 Cyanothece sp. ATCC 51142 5270 2444 0.46 44130 Human rhinovirus 3 10 9 0.90 44158 Aura virus 3 3 1.00 44689 Dictyostelium discoideum 13113 5819 0.44 44755 New York virus 2 1 0.50 45219 Guanarito virus 77 66 0.86 45221 Latino virus 8 6 0.75 45222 Parana virus 8 5 0.63 45223 Tamiami virus 9 7 0.78 45237 Helminthosporium victoriae virus 190S 2 1 0.50 45240 Human papillomavirus type 68 50 45 0.90 45351 Nematostella vectensis 24934 11291 0.45 45410 Hepatitis B virus adw4/Brazil/isolate w4b 7 3 0.43 45418 Rabies virus vnukovo-32 1 0 0.00 45659 Human adenovirus 3 480 360 0.75 45709 Sabia virus 4 3 0.75 46014 Acholeplasma phage L2 14 2 0.14 46015 Autographa californica nucleopolyhedrovirus 200 49 0.24 46245 Drosophila pseudoobscura pseudoobscura 16333 7500 0.46 46919 Whitewater Arroyo virus 30 28 0.93 46922 Human adenovirus 17 57 26 0.46 49267 Tomato pseudo-curly top virus 6 3 0.50 49891 Pirital virus 55 48 0.87 51033 Human papillomavirus type 73 11 11 1.00 53182 Feline foamy virus 20 7 0.35 54388 Salmonella enterica subsp. enterica serovar Paratyphi A 4130 2656 0.64 55096 Ippy virus 6 5 0.83 56780 Syntrophus aciditrophicus SB 3145 1796 0.57 57119 Bean yellow dwarf virus 9 7 0.78 57278 Human herpesvirus 7 strain JI 102 20 0.20 57279 Human herpesvirus 7 strain MUK 1 1 1.00 58103 Leishmania RNA virus 1 - 1 3 1 0.33 59300 Getah virus 30 29 0.97 59303 Sagiyama virus 8 8 1.00 59374 Fibrobacter succinogenes subsp. succinogenes S85 3807 1933 0.51 59380 Rice yellow stunt virus 14 5 0.36 59463 Myotis lucifugus 20849 12043 0.58 59748 Candidatus Phytoplasma australiense 675 396 0.59 59919 Prochlorococcus marinus subsp. pastoris str. CCMP1986 1946 1071 0.55 59920 Prochlorococcus marinus str. NATL2A 2149 1090 0.51 59922 Prochlorococcus marinus str. MIT 9303 2993 1389 0.46 60480 Shewanella sp. MR-4 3919 2430 0.62 60481 Shewanella sp. MR-7 4004 2438 0.61 61853 Nomascus leucogenys 23118 13267 0.57 62478 Influenza A virus (A/Kitakyushu/93(H3N2)) 6 6 1.00 62928 Azoarcus sp. BH72 3989 2624 0.66 62977 Acinetobacter sp. ADP1 3331 2077 0.62 63186 Zobellia galactanivorans 4713 2589 0.55 63737 Nostoc punctiforme PCC 73102 6607 3518 0.53 64091 Halobacterium sp. NRC-1 2426 1285 0.53 64141 Porcine enterovirus 9 4 4 1.00 64187 Xanthomonas oryzae pv. oryzae 4611 2475 0.54 64471 Synechococcus sp. CC9311 2884 1444 0.50 65393 Cyanothece sp. PCC 7424 5657 2704 0.48 65699 Neisseria meningitidis serogroup A 1903 1186 0.62 65743 Blackcurrant reversion virus 23 11 0.48 66084 Wolbachia sp. wRi 1039 613 0.59 66366 Tomato yellow leaf curl virus - Israel 63 38 0.60 66692 Bacillus clausii KSM-K16 4082 2615 0.64 67605 Human torovirus 2 2 1.00 69014 Thermococcus kodakarensis KOD1 2309 1275 0.55 69153 Human enterovirus 71 (strain BRCR) 1 1 1.00 69159 Human coxsackievirus A16 (strain G-10) 1 1 1.00 69162 Human herpesvirus 5 (strain 1042) 1 0 0.00 69163 Human herpesvirus 5 (strain 2387) 1 0 0.00 69164 Human herpesvirus 5 (strain 4654) 1 0 0.00 69165 Human herpesvirus 5 (strain 5040) 1 0 0.00 69166 Human herpesvirus 5 (strain 5035) 1 0 0.00 69167 Human herpesvirus 5 (strain 5160) 1 0 0.00 69168 Human herpesvirus 5 (strain 5508) 1 0 0.00 69169 Human herpesvirus 5 strain PT 1 0 0.00 69293 Gasterosteus aculeatus 28017 16061 0.57 70146 Measles virus strain Edmonston-B 2 1 0.50 70147 Measles virus strain Leningrad-16 1 0 0.00 70148 Measles virus strain Philadelphia-26 1 0 0.00 70149 Measles virus strain Edmonston-Zagreb 10 7 0.70 70448 Ostreococcus tauri 8029 3751 0.47 70601 Pyrococcus horikoshii OT3 2082 1052 0.51 70733 Tick-borne encephalitis virus (strain HYPR) 1 1 1.00 70794 Ovine astrovirus 3 2 0.67 70863 Shewanella oneidensis 4590 2431 0.53 71421 Haemophilus influenzae Rd KW20 1709 1247 0.73 72003 Diatraea saccharalis densovirus 6 3 0.50 73239 Plasmodium yoelii yoelii 7838 2035 0.26 73472 Apple chlorotic leaf spot virus (isolate APPLE) 3 2 0.67 73473 Apple chlorotic leaf spot virus (isolate PLUM P863) 3 2 0.67 73475 Chicken anemia virus Cuxhaven-1/Germany 3 3 1.00 73476 Chicken anemia virus 82-2/Japan 3 2 0.67 73477 Chicken anemia virus 26P4/USA 4 2 0.50 73478 Chicken anemia virus CIA-1/USA 3 2 0.67 73481 Foot-and-mouth disease virus A22/550/Azerbaijan/65 1 1 1.00 73482 Foot-and-mouth disease virus (strain O1) 6 5 0.83 73483 Human herpesvirus 5 (strain 119) 1 0 0.00 73484 Human immunodeficiency virus type 2 (isolate KR) 9 6 0.67 73487 Porcine parvovirus Kresse 4 2 0.50 73488 Potato virus x (strain HB) 5 3 0.60 73495 Orf virus NZ7 3 1 0.33 74109 Photobacterium profundum 5354 3175 0.59 74546 Prochlorococcus marinus str. MIT 9312 1963 1068 0.54 74547 Prochlorococcus marinus str. MIT 9313 2833 1279 0.45 75379 Thiomonas intermedia K12 3140 1991 0.63 75723 Enterobacteria phage MX1 4 3 0.75 76114 Aromatoleum aromaticum EbN1 4483 2429 0.54 76869 Pseudomonas putida GB-1 5404 3454 0.64 77856 Beak and feather disease virus 442 144 0.33 78245 Xanthobacter autotrophicus Py2 4973 3018 0.61 78540 Sleeping disease virus 44 25 0.57 79691 Human papillomavirus RTRX7 7 6 0.86 79692 Human respiratory syncytial virus B1 11 4 0.36 79694 Human rotavirus (serotype P13 / strain 1845) 1 0 0.00 79700 Rat cytomegalovirus Maastricht 167 17 0.10 79899 Igbo Ora virus 2 2 1.00 79923 Clonorchis sinensis 11242 4572 0.41 79929 Methanothermobacter marburgensis str. Marburg 1756 1106 0.63 81824 Monosiga brevicollis 9271 4646 0.50 81972 Arabidopsis lyrata subsp. lyrata 32625 15412 0.47 82658 Lordsdale virus 54 1 0.02 82659 Sapporo virus-Manchester 3 1 0.33 82829 Epstein-barr virus strain p3hr-1 2 0 0.00 82830 Epstein-barr virus strain ag876 75 26 0.35 82831 Equid herpesvirus type 2 strain 86/87 77 29 0.38 82834 Human immunodeficiency virus type 1 lw12.3 isolate 7 7 1.00 83333 Escherichia coli K-12 4475 3156 0.71 83334 Escherichia coli O157:H7 6669 3624 0.54 83555 Chlamydophila abortus 1013 623 0.62 83557 Chlamydophila caviae 1015 584 0.58 83558 Chlamydia pneumoniae 1724 779 0.45 83560 Chlamydia muridarum 916 564 0.62 84588 Synechococcus sp. WH 8102 2519 1382 0.55 84589 Salmon pancreas disease virus 143 95 0.66 84980 Desulfotalea psychrophila 3233 1830 0.57 85617 Vesicular exanthema of swine virus A48 4 1 0.25 85618 Ateline herpesvirus 3 71 20 0.28 85643 Thauera sp. MZ1T 3927 2468 0.63 85708 Porcine circovirus 2 1726 468 0.27 85962 Helicobacter pylori 26695 1557 911 0.59 85963 Helicobacter pylori J99 1488 903 0.61 88036 Selaginella moellendorffii 33282 17879 0.54 88776 Influenza A virus (A/Brevig Mission/1/1918(H1N1)) 11 9 0.82 90370 Salmonella enterica subsp. enterica serovar Typhi 5374 3112 0.58 90371 Salmonella enterica subsp. enterica serovar Typhimurium 6097 3650 0.60 92829 Xanthomonas axonopodis pv. citri 4381 2567 0.59 93059 Prochlorococcus marinus str. MIT 9211 1857 1084 0.58 93060 Prochlorococcus marinus str. MIT 9215 1985 1087 0.55 93061 Staphylococcus aureus subsp. aureus NCTC 8325 2891 1609 0.56 93062 Staphylococcus aureus subsp. aureus COL 2681 1602 0.60 93838 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) 11 9 0.82 94122 Shewanella sp. ANA-3 4346 2614 0.60 96561 Desulfococcus oleovorans Hxd3 3258 2044 0.63 98827 Influenza B virus (B/Memphis/3/89) 11 9 0.82 98832 Influenza B virus (B/Memphis/12/97) 11 10 0.91 98845 Influenza B virus (B/Panama/45/90) 7 7 1.00 99883 Tetraodon nigroviridis 28154 13448 0.48 100673 Influenza C virus (C/Johannesburg/1/66) 8 6 0.75 100834 Influenza A virus (A/Chicken/Hong Kong/220/97 (H5N1)) 10 9 0.90 100880 Northern cereal mosaic virus 17 3 0.18 101510 Rhodococcus jostii RHA1 9093 5360 0.59 103603 Snakehead virus 6 2 0.33 103690 Nostoc sp. PCC 7120 6160 2962 0.48 103900 Barley mild mosaic virus (strain Na1) 2 2 1.00 103902 Coxsackievirus B1 (strain Japan) 1 1 1.00 103903 Coxsackievirus B3 (strain Nancy) 1 1 1.00 103904 Coxsackievirus B3 (strain Woodruff) 1 1 1.00 103905 Coxsackievirus B4 (strain E2) 1 1 1.00 103906 Coxsackievirus B4 (strain JVB / Benschoten / New York/51) 1 1 1.00 103907 Coxsackievirus B5 (strain Peterborough / 1954/UK/85) 1 1 1.00 103908 Echovirus 1 (strain Farouk / ATCC VR-1038) 1 1 1.00 103909 Echovirus 12 (strain Travis) 1 1 1.00 103910 Echovirus 16 (strain Harrington) 1 1 1.00 103911 Echovirus 22 (strain Harris) 1 1 1.00 103913 Echovirus 6 strain Charles 1 1 1.00 103914 Echovirus 9 (strain Barty) 1 1 1.00 103915 Echovirus 9 (strain Hill) 1 1 1.00 103921 Herpes simplex virus (type 2 / strain B4327UR) 1 0 0.00 103922 Human enterovirus 71 (strain 7423/MS/87) 1 1 1.00 103926 Peanut mottle virus (strain M) 3 2 0.67 103927 Plum pox virus SK 68 2 1 0.50 103929 Rabies virus strain Pasteur vaccin 5 3 0.60 103931 Soybean mosaic virus G2 2 1 0.50 106370 Frankia sp. CcI3 4448 2624 0.59 107411 Influenza B virus (B/Ibaraki/2/85) 6 5 0.83 107412 Influenza B virus (B/Lee/40) 30 25 0.83 107417 Influenza B virus (B/Singapore/222/79) 10 10 1.00 107806 Buchnera aphidicola str. APS (Acyrthosiphon pisum) 574 504 0.88 109049 Influenza A virus (A/Niigata/137/96 (H3N2)) 1 1 1.00 110662 Synechococcus sp. CC9605 2634 1332 0.51 113370 Spodoptera frugiperda ascovirus 1a 149 39 0.26 114102 Frog adenovirus 1 23 8 0.35 114430 Ovine adenovirus 7 31 9 0.29 114615 Bradyrhizobium sp. ORS 278 6711 4007 0.60 114921 Beet mosaic virus 11 8 0.73 117128 Zucchini yellow mosaic virus (strain California) 2 1 0.50 117129 Zucchini yellow mosaic virus (strain Reunion Island) 2 1 0.50 117130 Zucchini yellow mosaic virus (strain Singapore) 2 1 0.50 117131 Lettuce mosaic virus (strain E) 2 1 0.50 117132 Lettuce mosaic virus (strain 0 / French isolate) 2 1 0.50 117138 Brome streak virus (strain 11-Cal) 1 1 1.00 121224 Pediculus humanus corporis 10847 5760 0.53 121791 Nipah virus 89 78 0.88 122961 HPeV 5 strain CT86-6760 1 1 1.00 122962 Echovirus 23 strain Williamson 1 1 1.00 123214 Persephonella marina EX-H1 2051 1260 0.61 123735 Tomato yellow leaf curl Sardinia virus 150 75 0.50 126070 Columbid circovirus 71 22 0.31 126740 Thermotoga sp. RQ2 1897 1348 0.71 126793 Plasmodium vivax SaI-1 5393 2071 0.38 126794 Vaccinia virus Ankara 293 115 0.39 126796 Thogoto virus (isolate SiAr 126) 7 4 0.57 127957 Influenza C virus (C/Nara/2/85) 16 9 0.56 127958 Influenza C virus (C/Yamagata/4/88) 1 1 1.00 128947 Zaire ebolavirus - Gabon (1994-1997) 5 3 0.60 128948 Sudan ebolavirus - Boniface (1976) 3 1 0.33 128949 Sudan ebolavirus - Maleo (1979) 3 1 0.33 128951 Zaire ebolavirus - Zaire (1995) 10 6 0.60 128952 Ebola virus - Mayinga, Zaire, 1976 9 6 0.67 128999 Tai Forest virus - Cote d'Ivoire, Cote d'Ivoire, 1994 2 0 0.00 129000 Zaire ebolavirus - Eckron (Zaire, 1976) 2 0 0.00 129003 Reston ebolavirus - Reston 33 15 0.45 129004 Reston ebolavirus - Siena/Philippine-92 2 0 0.00 129724 Human papillomavirus type 82 20 16 0.80 130763 Influenza A virus (A/Hong Kong/156/97(H5N1)) 12 10 0.83 132475 Yaba-like disease virus 150 50 0.33 132484 Measles virus strain Moraten 8 6 0.75 132487 Measles virus strain Schwarz 8 6 0.75 132504 Influenza A virus (A/X-31(H3N2)) 15 14 0.93 137722 Azospirillum sp. B510 6092 4026 0.66 138119 Desulfitobacterium hafniense Y51 5022 3024 0.60 138309 Tobacco mosaic virus strain B395A 3 3 1.00 138310 Tobacco mosaic virus strain Rakkyo 3 3 1.00 138311 Tomato mosaic virus (strain Kazakh K1) 3 3 1.00 138312 Tomato mosaic virus (strain Kazakh K2) 3 3 1.00 138314 Tomato mosaic virus (strain S-1) 3 3 1.00 138661 Odontoglossum ringspot virus (isolate Korean Cy) 5 5 1.00 138662 Odontoglossum ringspot virus (isolate Singapore 1) 4 4 1.00 138663 Pepper mild mottle virus (strain Japan) 3 3 1.00 142661 Canary circovirus 3 3 1.00 142804 Rice dwarf virus (isolate Fujian) 12 6 0.50 144752 Allpahuayo virus 6 4 0.67 145481 Physcomitrella patens subsp. patens 34927 12011 0.34 145579 Bdellovibrio phage phiMH2K 11 3 0.27 146032 Goose circovirus 48 15 0.31 146891 Prochlorococcus marinus str. AS9601 1921 1081 0.56 150340 Vibrio sp. Ex25 5352 3382 0.63 152794 Corynebacterium efficiens 2955 1686 0.57 155892 Caulobacter vibrioides 3792 2278 0.60 156889 Magnetococcus sp. MC-1 3594 2132 0.59 157898 Sulfolobus islandicus rod-shaped virus 1 77 6 0.08 158878 Staphylococcus aureus subsp. aureus Mu50 2716 1652 0.61 158879 Staphylococcus aureus subsp. aureus N315 2581 1611 0.62 159087 Dechloromonas aromatica RCB 4155 2568 0.62 160488 Pseudomonas putida KT2440 5313 3334 0.63 160491 Streptococcus pyogenes str. Manfredo 1736 1121 0.65 163164 Wolbachia endosymbiont of Drosophila melanogaster 1180 608 0.52 164546 Cupriavidus taiwanensis 5871 3674 0.63 164756 Mycobacterium sp. MCS 5591 3531 0.63 164757 Mycobacterium sp. JLS 5697 3677 0.65 167539 Prochlorococcus marinus subsp. marinus str. CCMP1375 1882 1089 0.58 167542 Prochlorococcus marinus str. MIT 9515 1901 1083 0.57 167546 Prochlorococcus marinus str. MIT 9301 1906 1077 0.57 167555 Prochlorococcus marinus str. NATL1A 2180 1096 0.50 167879 Colwellia psychrerythraea 34H 4872 4572 0.94 171101 Streptococcus pneumoniae R6 2029 1282 0.63 173976 Cycas necrotic stunt virus 4 4 1.00 175814 Cestrum yellow leaf curling virus 7 3 0.43 176279 Staphylococcus epidermidis RP62A 2492 1486 0.60 176280 Staphylococcus epidermidis ATCC 12228 2462 1493 0.61 176283 Echovirus 5 (strain Noyce) 1 1 1.00 176284 Echovirus 30 (strain Bastianni) 1 1 1.00 176299 Agrobacterium tumefaciens str. C58 5358 3397 0.63 176652 Invertebrate iridescent virus 6 469 60 0.13 176674 Influenza A virus (A/Duck/Hong Kong/2986.1/2000(H5N1)) 11 9 0.82 177416 Francisella tularensis subsp. tularensis SCHU S4 1528 989 0.65 177437 Desulfobacterium autotrophicum HRM2 4846 3034 0.63 178306 Pyrobaculum aerophilum str. IM2 2590 1192 0.46 183190 Xylella fastidiosa Temecula1 2007 1207 0.60 184922 Giardia lamblia ATCC 50803 7156 1802 0.25 185783 Golden shiner reovirus 12 7 0.58 185793 Tomato yellow leaf curl China virus 123 75 0.61 185959 Spiroplasma phage 1-C74 13 1 0.08 186460 Influenza A virus (A/swine/New Jersey/11/1976(H1N1)) 2 2 1.00 186497 Pyrococcus furiosus DSM 3638 2050 1222 0.60 186769 Cryphonectria parasitica mitovirus 1-NB631 1 1 1.00 186772 Saccharomyces 20S RNA narnavirus 1 1 1.00 187272 Alkalilimnicola ehrlichii MLHE-1 2862 1869 0.65 187420 Methanothermobacter thermautotrophicus str. Delta H 1872 1123 0.60 188937 Methanosarcina acetivorans C2A 4468 2274 0.51 189518 Leptospira interrogans serovar Lai str. 56601 3676 1871 0.51 189918 Mycobacterium sp. KMS 5894 3648 0.62 190192 Methanopyrus kandleri AV19 1688 977 0.58 190239 Calicivirus strain NB 8 1 0.13 190304 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 2046 1273 0.62 191547 Beet ringspot virus 3 2 0.67 192848 Bear Canyon virus 17 14 0.82 192952 Methanosarcina mazei Go1 3304 1846 0.56 193567 Streptococcus pyogenes SSI-1 1852 1119 0.60 194966 Enterobacteria phage SP6 65 7 0.11 195099 Campylobacter jejuni RM1221 1836 1061 0.58 195103 Clostridium perfringens ATCC 13124 2873 1732 0.60 196162 Nocardioides sp. JS614 4905 3045 0.62 196398 Southern cowpea mosaic virus 7 5 0.71 196426 Influenza A virus (A/Chicken/Hong Kong/YU562/01 (H5N1)) 11 9 0.82 196428 Influenza A virus (A/Chicken/Hong Kong/FY150/01 (H5N1)) 11 9 0.82 196430 Influenza A virus (A/Silky Chicken/Hong Kong/SF189/01 (H5N1)) 11 9 0.82 196434 Influenza A virus (A/Chicken/Hong Kong/715.5/01 (H5N1)) 11 9 0.82 196600 Vibrio vulnificus YJ016 4990 2831 0.57 196620 Staphylococcus aureus subsp. aureus MW2 2660 1596 0.60 197221 Thermosynechococcus elongatus BP-1 2451 1432 0.58 198599 Saccharomyces 23S RNA narnavirus 1 1 1.00 198628 Dickeya dadantii 3937 4532 2954 0.65 198804 Buchnera aphidicola str. Sg (Schizaphis graminum) 562 493 0.88 203119 Clostridium thermocellum ATCC 27405 3105 1840 0.59 203120 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 2002 1325 0.66 203122 Saccharophagus degradans 2-40 4000 2384 0.60 203123 Oenococcus oeni PSU-1 1687 1129 0.67 203124 Trichodesmium erythraeum IMS101 4354 2356 0.54 203224 Influenza C virus (C/California/78) 9 6 0.67 203225 Influenza C virus (C/Hyogo/1/83) 5 2 0.40 203229 Influenza C virus (C/Mississippi/80) 11 5 0.45 203231 Influenza C virus (C/pig/Beijing/115/81) 10 5 0.50 203232 Influenza C virus (C/Nara/82) 16 9 0.56 203233 Influenza C virus (C/Kyoto/41/82) 10 5 0.50 203267 Tropheryma whipplei str. Twist 805 553 0.69 203907 Candidatus Blochmannia floridanus 589 525 0.89 204536 Sulfurihydrogenibium azorense Az-Fu1 1708 1124 0.66 204669 Candidatus Koribacter versatilis Ellin345 4771 2705 0.57 204722 Brucella suis 1330 3282 1943 0.59 204773 Herminiimonas arsenicoxydans 3286 1974 0.60 205913 Bifidobacterium longum DJO10A 1980 1249 0.63 205914 Haemophilus somnus 129PT 1793 1197 0.67 205918 Pseudomonas syringae pv. syringae B728a 5072 3224 0.64 205920 Ehrlichia chaffeensis str. Arkansas 1100 574 0.52 205922 Pseudomonas fluorescens Pf0-1 5714 3596 0.63 206672 Bifidobacterium longum NCC2705 1725 1128 0.65 207559 Desulfovibrio alaskensis G20 3220 2098 0.65 208899 Cupixi virus 4 3 0.75 208963 Pseudomonas aeruginosa UCBPP-PA14 5886 3671 0.62 208964 Pseudomonas aeruginosa PAO1 5577 3577 0.64 211044 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) 33 28 0.85 211977 Aravan virus 6 4 0.67 212035 Acanthamoeba polyphaga mimivirus 2144 559 0.26 212042 Anaplasma phagocytophilum HZ 1330 580 0.44 214684 Cryptococcus neoformans var. neoformans JEC21 6436 3437 0.53 215689 Erwinia sp. Ejp617 3632 2171 0.60 216389 Dehalococcoides sp. BAV1 1370 903 0.66 216466 Streptococcus agalactiae serogroup V 2105 1280 0.61 216495 Streptococcus agalactiae serogroup III 2002 1241 0.62 216591 Burkholderia cenocepacia J2315 6993 4415 0.63 216592 Escherichia coli 042 4884 2973 0.61 216594 Mycobacterium marinum M 5424 3121 0.58 216595 Pseudomonas fluorescens SBW25 6435 3870 0.60 216596 Rhizobium leguminosarum bv. viciae 3841 7110 4447 0.63 216597 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 4433 2831 0.64 217166 Influenza C virus (C/Yamagata/64) 5 1 0.20 217828 Influenza A virus (A/equine/Sao Paulo/1/76(H7N7)) 1 1 1.00 217829 Influenza A virus (A/equine/Switzerland/137/72(H7N7)) 1 1 1.00 217831 Influenza A virus (A/equine/Newmarket/1/77(H7N7)) 5 4 0.80 217834 Influenza A virus (A/equine/Detroit/1/64(H7N7)) 1 1 1.00 217835 Influenza A virus (A/equine/Cambridge/1/73(H7N7)) 1 1 1.00 217836 Influenza A virus (A/equine/C.Detroit/1/64(H7N7)) 1 1 1.00 217837 Influenza A virus (A/equine/Cambridge/1/63(H7N7)) 1 1 1.00 217992 Escherichia coli O6 5336 2985 0.56 218493 Salmonella bongori NCTC 12419 3853 2561 0.66 218494 Streptococcus suis P1/7 1814 1221 0.67 218495 Streptococcus uberis 0140J 1760 1238 0.70 218496 Tropheryma whipplei TW08/27 781 548 0.70 219688 Mink astrovirus 17 15 0.88 220664 Pseudomonas fluorescens Pf-5 6108 5333 0.87 220668 Lactobacillus plantarum WCFS1 3088 1952 0.63 221016 Influenza A virus (A/Queensland/7/70(H3N2)) 10 9 0.90 221109 Oceanobacillus iheyensis HTE831 3490 2176 0.62 221538 Tomato yellow leaf curl Sardinia virus-[Spain2] 6 3 0.50 221988 Mannheimia succiniciproducens MBEL55E 2367 1437 0.61 222073 African cassava mosaic virus - [Nigeria] 8 5 0.63 222448 Bean golden yellow mosaic virus-[Puerto Rico] 7 5 0.71 222449 Bean golden yellow mosaic virus-[Puerto Rico-Japan] 2 0 0.00 222523 Bacillus cereus ATCC 10987 5834 2992 0.51 222891 Neorickettsia sennetsu str. Miyayama 932 524 0.56 222929 Coccidioides posadasii C735 delta SOWgp 7226 3956 0.55 223283 Pseudomonas syringae pv. tomato str. DC3000 5432 4784 0.88 223295 Mungbean yellow mosaic virus-Vigna 12 8 0.67 223303 Pepper huasteco yellow vein virus 23 20 0.87 223310 Potato yellow mosaic virus - [Venezuela] 7 5 0.71 223341 Tomato golden mosaic virus-Yellow vein 7 5 0.71 223353 Tomato leaf curl virus-[AU] 7 4 0.57 224324 Aquifex aeolicus VF5 1553 1067 0.69 224325 Archaeoglobus fulgidus DSM 4304 2398 1400 0.58 224914 Brucella melitensis bv. 1 str. 16M 4966 3297 0.66 224915 Buchnera aphidicola str. Bp (Baizongia pistaciae) 507 441 0.87 225849 Shewanella piezotolerans WP3 4923 2678 0.54 226186 Bacteroides thetaiotaomicron VPI-5482 4782 2777 0.58 226900 Bacillus cereus ATCC 14579 5255 2957 0.56 227321 Aspergillus nidulans FGSC A4 12699 6982 0.55 227859 SARS coronavirus 53 24 0.45 228400 Haemophilus somnus 2336 1972 1273 0.65 228405 Hyphomonas neptunium ATCC 15444 3499 2881 0.82 228908 Nanoarchaeum equitans Kin4-M 536 289 0.54 229032 Porcine epidemic diarrhea virus (strain CV777) 7 3 0.43 230236 Porcine hemagglutinating encephalomyelitis virus (strain IAF-404) 8 2 0.25 230237 Porcine hemagglutinating encephalomyelitis virus (strain 67N) 8 2 0.25 230285 Influenza B virus (B/Bonn/43) 1 1 1.00 230286 Influenza B virus (B/USSR/100/83) 3 3 1.00 230407 Cryphonectria parasitica mycoreovirus-1 (9B21) 11 2 0.18 231417 Coxsackievirus A16 (strain Tainan/5079/98) 1 1 1.00 231473 Coxsackievirus B2 (strain Ohio-1) 1 1 1.00 231474 Coxsackievirus B6 (strain Schmitt) 1 1 1.00 232721 Acidovorax sp. JS42 4046 2421 0.60 233262 Bovine enteric coronavirus (strain 98TXSF-110-ENT) 12 4 0.33 233264 Bovine respiratory coronavirus (strain 98TXSF-110-LUN) 12 4 0.33 233412 Haemophilus ducreyi 35000HP 1694 992 0.59 234267 Candidatus Solibacter usitatus Ellin6076 7761 4352 0.56 234601 Sapovirus Mc10 2 1 0.50 234621 Rhodococcus erythropolis PR4 6424 3948 0.61 234826 Anaplasma marginale str. St. Maries 970 585 0.60 234831 Pseudoalteromonas sp. SM9913 3710 2229 0.60 235279 Helicobacter hepaticus ATCC 51449 1872 1002 0.54 235909 Geobacillus kaustophilus HTA426 3516 2061 0.59 237561 Candida albicans SC5314 9120 5821 0.64 237631 Ustilago maydis 521 6553 3346 0.51 237895 Cryptosporidium hominis 4380 1522 0.35 240015 Acidobacterium capsulatum ATCC 51196 3363 1972 0.59 240176 Coprinopsis cinerea okayama7#130 13346 5020 0.38 240292 Anabaena variabilis ATCC 29413 5643 3050 0.54 242231 Neisseria gonorrhoeae FA 1090 1963 1128 0.57 242507 Magnaporthe oryzae 70-15 13295 5402 0.41 242619 Porphyromonas gingivalis W83 1864 1103 0.59 243090 Rhodopirellula baltica SH 1 7271 2727 0.38 243159 Acidithiobacillus ferrooxidans ATCC 23270 3120 1674 0.54 243164 Dehalococcoides ethenogenes 195 1502 934 0.62 243231 Geobacter sulfurreducens PCA 3418 2112 0.62 243232 Methanocaldococcus jannaschii DSM 2661 1787 1089 0.61 243233 Methylococcus capsulatus str. Bath 2925 2732 0.93 243243 Mycobacterium avium 104 5040 3079 0.61 243265 Photorhabdus luminescens subsp. laumondii TTO1 4556 2455 0.54 243272 Mycoplasma arthritidis 158L3-1 631 366 0.58 243273 Mycoplasma genitalium G37 484 354 0.73 243275 Treponema denticola ATCC 35405 2753 1352 0.49 243276 Treponema pallidum subsp. pallidum str. Nichols 1033 609 0.59 244589 Sulfolobus virus 1 34 11 0.32 246194 Carboxydothermus hydrogenoformans Z-2901 2615 1544 0.59 246195 Dichelobacter nodosus VCS1703A 1273 859 0.67 246196 Mycobacterium smegmatis str. MC2 155 6641 4223 0.64 246197 Myxococcus xanthus DK 1622 7324 3764 0.51 246200 Ruegeria pomeroyi DSS-3 4247 2769 0.65 246343 Turkey astrovirus 2 288 183 0.64 247156 Nocardia farcinica IFM 10152 5943 3321 0.56 249583 Irkut virus 5 3 0.60 251221 Gloeobacter violaceus PCC 7421 4409 2214 0.50 254945 Ehrlichia ruminantium str. Welgevonden 1123 674 0.60 255470 Dehalococcoides sp. CBDB1 1483 939 0.63 257310 Bordetella bronchiseptica RB50 4967 3189 0.64 257314 Lactobacillus johnsonii NCC 533 1809 1124 0.62 257363 Rickettsia typhi str. Wilmington 836 576 0.69 258594 Rhodopseudomonas palustris CGA009 4811 3054 0.63 259536 Psychrobacter arcticus 273-4 2099 1374 0.65 259564 Methanococcoides burtonii DSM 6242 2242 1350 0.60 260717 Human papillomavirus type 94 23 19 0.83 260797 Heliothis virescens ascovirus 3e 179 35 0.20 261292 Nitrosomonas sp. Is79A3 3273 1795 0.55 261991 Hepatitis delta virus (isolate US-2) 2 2 1.00 261992 Hepatitis delta virus (isolate TW2476) 2 2 1.00 261993 Hepatitis delta virus (isolate VnzD8624) 2 2 1.00 261994 Hepatitis delta virus (isolate VnzD8349) 2 2 1.00 261995 Hepatitis delta virus (isolate VnzD8375) 2 2 1.00 261996 Hepatitis delta virus (isolate Peru-1) 2 2 1.00 262177 Orgyia pseudotsugata MNPV 155 43 0.28 262398 Human herpesvirus 7 strain RK 1 0 0.00 262543 Exiguobacterium sibiricum 255-15 3006 1880 0.63 262698 Brucella abortus bv. 1 str. 9-941 3077 1859 0.60 262719 Mycoplasma hyopneumoniae J 671 405 0.60 262722 Mycoplasma hyopneumoniae 7448 694 402 0.58 262723 Mycoplasma synoviae 53 679 408 0.60 262724 Thermus thermophilus HB27 2200 1439 0.65 262728 Haemophilus influenzae R2866 1793 1249 0.70 262768 Onion yellows phytoplasma OY-M 730 456 0.62 263820 Picrophilus torridus DSM 9790 1535 1031 0.67 264198 Ralstonia eutropha JMP134 6454 4161 0.64 264199 Streptococcus thermophilus LMG 18311 1585 1032 0.65 264201 Candidatus Protochlamydia amoebophila UWE25 2024 963 0.48 264202 Chlamydophila felis Fe/C-56 1013 601 0.59 264462 Bdellovibrio bacteriovorus HD100 3583 1895 0.53 264730 Pseudomonas syringae pv. phaseolicola 1448A 5045 4303 0.85 264731 Prevotella ruminicola 23 2761 1704 0.62 264732 Moorella thermoacetica ATCC 39073 2451 1589 0.65 265072 Methylobacillus flagellatus KT 2609 1706 0.65 265311 Mesoplasma florum L1 683 477 0.70 265669 Listeria monocytogenes serotype 4b str. F2365 2818 2648 0.94 265871 Cowpox virus (strain GRI-90) 19 11 0.58 265872 Cowpox virus (Brighton Red) 17 12 0.71 266117 Rubrobacter xylanophilus DSM 9941 3127 2170 0.69 266264 Cupriavidus metallidurans CH34 6480 3917 0.60 266265 Burkholderia xenovorans LB400 8592 5441 0.63 266779 Chelativorans sp. BNC1 4530 2835 0.63 266834 Sinorhizobium meliloti 1021 6169 3999 0.65 266835 Mesorhizobium loti MAFF303099 7255 4215 0.58 266940 Kineococcus radiotolerans SRS30216 4674 2798 0.60 267377 Methanococcus maripaludis S2 1722 1106 0.64 267407 European mountain ash ringspot-associated virus 11 4 0.36 267608 Ralstonia solanacearum GMI1000 5022 3037 0.60 267671 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 3654 1781 0.49 267747 Propionibacterium acnes KPA171202 2294 1486 0.65 267748 Mycoplasma mobile 163K 628 413 0.66 268305 Bovine viral diarrhea virus 1-CP7 1 1 1.00 268331 Maize streak virus - E[Pat] 4 3 0.75 268343 Maize streak virus - [Raw] 4 3 0.75 268344 Maize streak virus - [Set] 4 3 0.75 268409 Maize streak virus - B[Tas] 5 3 0.60 268776 Miscanthus streak virus - [91] 5 3 0.60 268780 Panicum streak virus - [Kenya] 4 3 0.75 268781 Sugarcane streak virus - [Natal] 4 3 0.75 268789 Wheat dwarf virus - [Sweden] 4 3 0.75 268960 Beet curly top virus - California [Logan] 9 3 0.33 269084 Synechococcus elongatus PCC 6301 2555 1527 0.60 269446 Rous sarcoma virus (strain Schmidt-Ruppin A) 5 3 0.60 269482 Burkholderia vietnamiensis G4 7410 4133 0.56 269483 Burkholderia sp. 383 7715 4964 0.64 269484 Ehrlichia canis str. Jake 921 573 0.62 269796 Rhodospirillum rubrum ATCC 11170 3835 2540 0.66 269797 Methanosarcina barkeri str. Fusaro 3616 1994 0.55 269798 Cytophaga hutchinsonii ATCC 33406 3771 1964 0.52 269799 Geobacter metallireducens GS-15 3467 2253 0.65 269800 Thermobifida fusca YX 3085 1929 0.63 271065 Methylomicrobium alcaliphilum 4053 2274 0.56 271848 Burkholderia thailandensis E264 5563 3453 0.62 272557 Aeropyrum pernix K1 1701 982 0.58 272558 Bacillus halodurans C-125 4006 2412 0.60 272559 Bacteroides fragilis NCTC 9343 4234 2276 0.54 272563 Clostridium difficile 630 3784 2364 0.62 272564 Desulfitobacterium hafniense DCB-2 4852 2932 0.60 272568 Gluconacetobacter diazotrophicus PAl 5 5905 3410 0.58 272569 Haloarcula marismortui ATCC 43049 4237 2101 0.50 272620 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 5126 3419 0.67 272621 Lactobacillus acidophilus NCFM 1859 1243 0.67 272622 Lactococcus lactis subsp. cremoris SK11 2442 1509 0.62 272623 Lactococcus lactis subsp. lactis Il1403 2225 1379 0.62 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 2949 1723 0.58 272630 Methylobacterium extorquens AM1 6234 3083 0.49 272632 Mycoplasma mycoides subsp. mycoides SC str. PG1 978 566 0.58 272633 Mycoplasma penetrans HF-2 1028 562 0.55 272634 Mycoplasma pneumoniae M129 687 402 0.59 272635 Mycoplasma pulmonis UAB CTIP 778 456 0.59 272831 Neisseria meningitidis FAM18 1865 1172 0.63 272843 Pasteurella multocida subsp. multocida str. Pm70 2015 1379 0.68 272844 Pyrococcus abyssi GE5 1788 1167 0.65 272942 Rhodobacter capsulatus SB 1003 3632 2297 0.63 272943 Rhodobacter sphaeroides 2.4.1 4244 2642 0.62 272944 Rickettsia conorii str. Malish 7 1372 1266 0.92 272947 Rickettsia prowazekii str. Madrid E 835 570 0.68 273036 Staphylococcus aureus RF122 2513 1557 0.62 273057 Sulfolobus solfataricus P2 2941 1610 0.55 273063 Sulfolobus tokodaii str. 7 2805 1459 0.52 273068 Thermoanaerobacter tengcongensis MB4 2545 1625 0.64 273075 Thermoplasma acidophilum DSM 1728 1483 931 0.63 273116 Thermoplasma volcanium GSS1 1524 944 0.62 273119 Ureaplasma parvum serovar 3 str. ATCC 700970 611 375 0.61 277944 Human coronavirus NL63 401 131 0.33 278137 Mycobacterium sp. Spyr1 5225 3264 0.62 278197 Pediococcus pentosaceus ATCC 25745 1755 1157 0.66 279010 Bacillus licheniformis ATCC 14580 4676 2771 0.59 279238 Novosphingobium aromaticivorans DSM 12444 3917 2475 0.63 279794 Influenza A virus (A/HK/212/03 (H5N1)) 11 9 0.82 279803 Influenza A virus (A/Ck/HK/96.1/02 (H5N1)) 11 9 0.82 279808 Staphylococcus haemolyticus JCSC1435 2640 1601 0.61 281090 Leifsonia xyli subsp. xyli str. CTCB07 2001 1239 0.62 281309 Bacillus thuringiensis serovar konkukian str. 97-27 5169 2958 0.57 281310 Haemophilus influenzae 86-028NP 1792 1222 0.68 281921 Raspberry ringspot virus strain cherry 2 2 1.00 282063 Arabis mosaic virus strain NW 2 2 1.00 282458 Staphylococcus aureus subsp. aureus MRSA252 2640 1631 0.62 282459 Staphylococcus aureus subsp. aureus MSSA476 2602 1595 0.61 283165 Bartonella quintana str. Toulouse 1146 799 0.70 283166 Bartonella henselae str. Houston-1 1481 907 0.61 283643 Cryptococcus neoformans var. neoformans B-3501A 6570 3429 0.52 283942 Idiomarina loihiensis L2TR 2608 1749 0.67 284169 Influenza A virus (A/Ck/HK/31.2/2002(H5N1)) 11 9 0.82 284172 Influenza A virus (A/Ck/HK/37.4/2002(H5N1)) 11 9 0.82 284177 Influenza A virus (A/Ck/HK/YU22/2002(H5N1)) 11 9 0.82 284184 Influenza A virus (A/Ck/ST/4231/2003(H5N1)) 11 9 0.82 284208 Influenza A virus (A/Gf/HK/38/2002(H5N1)) 11 9 0.82 284214 Influenza A virus (A/SCk/HK/YU100/2002(H5N1)) 11 9 0.82 284215 Influenza A virus (A/teal/China/2978.1/2002(H5N1)) 11 9 0.82 284590 Kluyveromyces lactis NRRL Y-1140 5071 2796 0.55 284591 Yarrowia lipolytica CLIB122 6415 3371 0.53 284592 Debaryomyces hansenii CBS767 6243 3310 0.53 284593 Candida glabrata CBS 138 5197 2867 0.55 284811 Ashbya gossypii ATCC 10895 4761 2667 0.56 284812 Schizosaccharomyces pombe 972h- 5083 4818 0.95 284813 Encephalitozoon cuniculi GB-M1 1910 953 0.50 285006 Saccharomyces cerevisiae RM11-1a 5357 2986 0.56 288000 Bradyrhizobium sp. BTAi1 7570 4522 0.60 288681 Bacillus cereus E33L 5638 3167 0.56 288705 Renibacterium salmoninarum ATCC 33209 3421 2222 0.65 289376 Thermodesulfovibrio yellowstonii DSM 11347 1982 1315 0.66 289380 Clostridium perfringens SM101 2558 1581 0.62 289397 Mycoplasma bovis PG45 742 455 0.61 290008 Isfahan virus 5 4 0.80 290315 Chlorobium limicola DSM 245 2419 1492 0.62 290317 Chlorobium phaeobacteroides DSM 266 2579 1551 0.60 290318 Chlorobium phaeovibrioides DSM 265 1750 1223 0.70 290338 Citrobacter koseri ATCC BAA-895 5019 2834 0.56 290339 Cronobacter sakazakii ATCC BAA-894 4421 2499 0.57 290340 Arthrobacter aurescens TC1 4565 2851 0.62 290397 Anaeromyxobacter dehalogenans 2CP-C 4345 2667 0.61 290398 Chromohalobacter salexigens DSM 3043 3302 2240 0.68 290399 Arthrobacter sp. FB24 4453 2822 0.63 290400 Jannaschia sp. CCS1 4271 2572 0.60 290402 Clostridium beijerinckii NCIMB 8052 5003 3157 0.63 290512 Prosthecochloris aestuarii DSM 271 2319 1457 0.63 290579 HIV-1 M:B_Lai 1 1 1.00 290633 Gluconobacter oxydans 621H 2626 1614 0.61 290650 TT virus genotype 6 6 0 0.00 290847 Helicobacter pylori 51 1412 887 0.63 291175 Sapovirus Hu/Dresden/pJG-Sap01/DE 3 1 0.33 291272 Candidatus Blochmannia pennsylvanicus str. BPEN 610 536 0.88 291603 Faba bean necrotic yellows virus (isolate Egyptian EV1-93) 11 4 0.36 291604 Faba bean necrotic yellows virus (isolate SV292-88) 13 4 0.31 291605 Milk vetch dwarf virus (isolate 1) 12 5 0.42 291607 Subterranean clover stunt virus (strain F) 8 3 0.38 291795 Influenza B virus (B/Paris/329/90) 1 1 1.00 291796 Influenza B virus (B/Hong Kong/9/89) 1 1 1.00 291797 Influenza B virus (B/Hong Kong/22/89) 1 1 1.00 291798 Influenza B virus (B/Bangkok/163/90) 1 1 1.00 291799 Influenza B virus (B/Texas/1/91) 1 1 1.00 291800 Influenza B virus (B/Texas/4/90) 1 1 1.00 291801 Influenza B virus (B/New York/3/90) 1 1 1.00 291802 Influenza B virus (B/Guangdong/55/89) 1 1 1.00 291803 Influenza B virus (B/Victoria/103/89) 1 1 1.00 291804 Influenza B virus (B/Victoria/19/89) 1 1 1.00 291805 Influenza B virus (B/South Dakota/5/89) 1 1 1.00 291806 Influenza B virus (B/India/3/89) 1 1 1.00 292349 Feline calicivirus (strain Urbana) 3 1 0.33 292414 Ruegeria sp. TM1040 3849 2447 0.64 292415 Thiobacillus denitrificans ATCC 25259 2826 1745 0.62 292805 Wolbachia endosymbiont strain TRS of Brugia malayi 805 530 0.66 293613 Rickettsia canadensis str. McKiel 1091 623 0.57 293614 Rickettsia akari str. Hartford 1257 663 0.53 293826 Alkaliphilus metalliredigens QYMF 4467 2549 0.57 294746 Meyerozyma guilliermondii ATCC 6260 5919 3178 0.54 294747 Candida tropicalis MYA-3404 6226 3152 0.51 294748 Candida albicans WO-1 5742 2984 0.52 295027 Human herpesvirus 5 strain Merlin 170 26 0.15 295358 Mycoplasma hyopneumoniae 232 691 395 0.57 295405 Bacteroides fragilis YCH46 4597 2324 0.51 296587 Micromonas sp. RCC299 10115 4798 0.47 296591 Polaromonas sp. JS666 5439 3317 0.61 297245 Legionella pneumophila str. Lens 2919 1592 0.55 297246 Legionella pneumophila str. Paris 3147 1703 0.54 298339 Pan troglodytes foamy virus 20 18 0.90 298653 Frankia sp. EAN1pec 7134 4342 0.61 298654 Frankia sp. EuI1c 7079 4540 0.64 299386 Equine arteritis virus Bucyrus 8 3 0.38 299768 Streptococcus thermophilus CNRZ1066 1590 1024 0.64 300267 Shigella dysenteriae Sd197 3897 2556 0.66 300268 Shigella boydii Sb227 3938 2547 0.65 300269 Shigella sonnei Ss046 4068 2692 0.66 300852 Thermus thermophilus HB8 2236 1426 0.64 300880 Swinepox virus (strain 17077-99) 146 54 0.37 301352 Vaccinia virus Tashkent 1 1 1.00 301447 Streptococcus pyogenes serotype M1 2308 1419 0.61 301448 Streptococcus pyogenes serotype M3 1862 1139 0.61 301450 Streptococcus pyogenes serotype M6 1882 1190 0.63 301451 Streptococcus pyogenes serotype M18 1837 1146 0.62 301478 Murray valley encephalitis virus (strain MVE-1-51) 1 1 1.00 302271 Sendai virus (strain Hamamatsu) 9 6 0.67 302272 Sendai virus (strain Ohita) 9 6 0.67 302409 Ehrlichia ruminantium str. Gardel 948 573 0.60 303300 Taro vein chlorosis virus 6 3 0.50 304371 Methanocella paludicola SANAE 2994 1613 0.54 305674 Deerpox virus W-848-83 165 61 0.37 306263 Campylobacter lari RM2100 1545 994 0.64 306537 Corynebacterium jeikeium K411 2064 1297 0.63 306901 Chaetomium globosum CBS 148.51 11041 4831 0.44 306902 Clavispora lusitaniae ATCC 42720 5932 2939 0.50 307796 Saccharomyces cerevisiae YJM789 5861 3272 0.56 308444 Human adenovirus 15/H9 1 0 0.00 309798 Coprothermobacter proteolyticus DSM 5265 1481 966 0.65 309799 Dictyoglomus thermophilum H-6-12 1913 1287 0.67 309800 Haloferax volcanii DS2 3988 2116 0.53 309801 Thermomicrobium roseum DSM 5159 2858 1664 0.58 309803 Thermotoga neapolitana DSM 4359 1939 1314 0.68 309807 Salinibacter ruber DSM 13855 2812 1712 0.61 310273 Equine herpesvirus 1 (strain V592) 74 26 0.35 311175 Influenza A virus (A/turkey/Ontario/6118/1968(H8N4)) 24 20 0.83 311176 Blotched snakehead virus 3 2 0.67 311339 Human herpesvirus 5 strain Toledo 176 26 0.15 311402 Agrobacterium vitis S4 5353 3460 0.65 311403 Agrobacterium radiobacter K84 6700 4466 0.67 311424 Dehalococcoides sp. VS 1427 941 0.66 312017 Tetrahymena thermophila SB210 15290 4588 0.30 312153 Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 2074 1382 0.67 312309 Vibrio fischeri ES114 3816 2464 0.65 314225 Erythrobacter litoralis HTCC2594 2999 1701 0.57 314275 Alteromonas macleodii str. 'Deep ecotype' 3729 2215 0.59 314315 Lactobacillus sakei subsp. sakei 23K 1872 1184 0.63 314536 Rabbit hemorrhagic disease virus-FRG 2 1 0.50 314538 Rabbit hemorrhagic disease virus-AST89 2 1 0.50 314565 Xanthomonas campestris pv. campestris str. 8004 4249 2524 0.59 314723 Borrelia hermsii DAH 885 554 0.63 314724 Borrelia turicatae 91E135 822 550 0.67 315277 Chlamydia trachomatis A/HAR-13 917 579 0.63 315456 Rickettsia felis URRWXCal2 1428 796 0.56 315730 Bacillus weihenstephanensis KBAB4 5650 3066 0.54 315749 Bacillus cytotoxicus NVH 391-98 3841 2208 0.57 315750 Bacillus pumilus SAFR-032 3676 2244 0.61 315953 Acidianus two-tailed virus 72 14 0.19 316055 Rhodopseudomonas palustris BisA53 4851 2870 0.59 316056 Rhodopseudomonas palustris BisB18 4864 2922 0.60 316057 Rhodopseudomonas palustris BisB5 4392 2711 0.62 316058 Rhodopseudomonas palustris HaA2 4680 2952 0.63 316067 Geobacter sp. FRC-32 3797 2369 0.62 316273 Xanthomonas campestris pv. vesicatoria str. 85-10 4629 2652 0.57 316274 Herpetosiphon aurantiacus DSM 785 5254 3014 0.57 316275 Aliivibrio salmonicida LFI1238 3516 2144 0.61 316278 Synechococcus sp. RCC307 2528 1362 0.54 316279 Synechococcus sp. CC9902 2301 1276 0.55 316385 Escherichia coli str. K-12 substr. DH10B 3990 2737 0.69 316401 Escherichia coli ETEC H10407 4819 2979 0.62 317025 Thiomicrospira crunogena XCL-2 2187 1441 0.66 317655 Sphingopyxis alaskensis RB2256 3186 1999 0.63 318161 Shewanella denitrificans OS217 3727 2270 0.61 318167 Shewanella frigidimarina NCIMB 400 3990 2486 0.62 318586 Paracoccus denitrificans PD1222 5019 3143 0.63 319224 Shewanella putrefaciens CN-32 3948 2422 0.61 319225 Chlorobium luteolum DSM 273 2075 1384 0.67 319700 Streptococcus pyogenes serotype M28 1884 1179 0.63 319795 Deinococcus geothermalis DSM 11300 3006 1947 0.65 320372 Burkholderia pseudomallei 1710b 6329 3569 0.56 320373 Burkholderia pseudomallei 668 7102 3565 0.50 320388 Burkholderia mallei SAVP1 4981 2766 0.56 320389 Burkholderia mallei NCTC 10247 5182 2848 0.55 320483 Anaplasma marginale str. Florida 963 592 0.61 321327 Synechococcus sp. JA-3-3Ab 2748 1513 0.55 321332 Synechococcus sp. JA-2-3B'a(2-13) 2835 1560 0.55 321609 Cryphonectria hypovirus 1-Euro7 2 2 1.00 321614 Phaeosphaeria nodorum SN15 15998 5601 0.35 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 1682 1038 0.62 321967 Lactobacillus casei ATCC 334 2709 1621 0.60 322098 Aster yellows witches'-broom phytoplasma AYWB 690 377 0.55 322104 Scheffersomyces stipitis CBS 6054 5797 3321 0.57 322159 Streptococcus thermophilus LMD-9 1704 1072 0.63 322710 Azotobacter vinelandii DJ 4990 2953 0.59 323097 Nitrobacter hamburgensis X14 4245 2220 0.52 323098 Nitrobacter winogradskyi Nb-255 2980 1729 0.58 323259 Methanospirillum hungatei JF-1 3087 1822 0.59 323261 Nitrosococcus oceani ATCC 19707 2995 1805 0.60 323848 Nitrosospira multiformis ATCC 25196 2732 1677 0.61 323850 Shewanella loihica PV-4 3855 2420 0.63 324057 Paenibacillus sp. JDR-2 6210 4038 0.65 324602 Chloroflexus aurantiacus J-10-fl 3850 2481 0.64 324831 Lactobacillus gasseri ATCC 33323 1696 1103 0.65 324925 Pelodictyon phaeoclathratiforme BU-1 2685 1562 0.58 325240 Shewanella baltica OS155 4223 2582 0.61 326297 Shewanella amazonensis SB2B 3638 2341 0.64 326298 Sulfurimonas denitrificans DSM 1251 2084 1378 0.66 326423 Bacillus amyloliquefaciens FZB42 3695 2282 0.62 326424 Frankia alni ACN14a 6710 3637 0.54 326426 Bifidobacterium breve UCC2003 1827 1223 0.67 326427 Chloroflexus aggregans DSM 9485 3725 2362 0.63 326442 Pseudoalteromonas haloplanktis TAC125 3485 2141 0.61 327105 HIV-1 O_ANT70 9 9 1.00 328615 Trichoplusia ni ascovirus 2c 161 39 0.24 329389 Hepatitis C virus (isolate Glasgow) 1 1 1.00 329726 Acaryochloris marina MBIC11017 8176 3418 0.42 329852 Enterobacteria phage MS2 67 27 0.40 330779 Sulfolobus acidocaldarius DSM 639 2222 1244 0.56 330879 Aspergillus fumigatus Af293 9641 5344 0.55 331111 Escherichia coli E24377A 4915 2913 0.59 331112 Escherichia coli HS 4308 2752 0.64 331117 Neosartorya fischeri NRRL 181 10392 5650 0.54 331271 Burkholderia cenocepacia AU 1054 6450 4196 0.65 331272 Burkholderia cenocepacia HI2424 6898 4417 0.64 331636 Chlamydophila psittaci 6BC 1219 683 0.56 331642 Newbury agent 1 2 1 0.50 331678 Chlorobium phaeobacteroides BS1 2434 1468 0.60 332648 Botryotinia fuckeliana B05.10 16374 5103 0.31 332952 Aspergillus flavus NRRL3357 13484 6726 0.50 333284 Hepatitis C virus (isolate Con1) 1 1 1.00 333752 Human papillomavirus type 27 6 6 1.00 333753 Human papillomavirus type 57 7 6 0.86 333759 Human papillomavirus type 10 9 9 1.00 333760 Human papillomavirus type 16 933 747 0.80 333761 Human papillomavirus type 18 230 205 0.89 333762 Human papillomavirus type 26 6 6 1.00 333763 Human papillomavirus type 32 14 14 1.00 333764 Human papillomavirus type 34 28 28 1.00 333765 Human papillomavirus type 53 192 186 0.97 333766 Human papillomavirus 54 14 12 0.86 333770 Human papillomavirus type 72 8 7 0.88 333923 Human papillomavirus type 5 56 46 0.82 334210 Human papillomavirus type 62 15 14 0.93 334380 Orientia tsutsugamushi str. Ikeda 1648 756 0.46 334390 Lactobacillus fermentum IFO 3956 1818 1223 0.67 334413 Finegoldia magna ATCC 29328 1813 1117 0.62 335103 Adult diarrheal rotavirus strain J19 11 5 0.45 335283 Nitrosomonas eutropha C91 2473 1568 0.63 335284 Psychrobacter cryohalolentis K5 2496 1658 0.66 335541 Syntrophomonas wolfei subsp. wolfei str. Goettingen 2473 1520 0.61 335543 Syntrophobacter fumaroxidans MPOB 4012 2420 0.60 335992 Candidatus Pelagibacter ubique HTCC1062 1354 973 0.72 336407 Rickettsia bellii RML369-C 1400 763 0.55 336722 Mycosphaerella graminicola IPO323 10972 4884 0.45 336960 Avian nephritis virus 1 63 53 0.84 336963 Uncinocarpus reesii 1704 7760 3688 0.48 336982 Mycobacterium tuberculosis F11 3905 2253 0.58 337080 Rice tungro spherical virus (isolate Vt6) 1 1 1.00 337081 Rice tungro spherical virus (isolate A) 1 1 1.00 338187 Vibrio harveyi ATCC BAA-1116 5605 2913 0.52 338478 Macaque simian foamy virus 14 3 0.21 338565 Erwinia tasmaniensis 3626 2227 0.61 338963 Pelobacter carbinolicus DSM 2380 3341 2069 0.62 338966 Pelobacter propionicus DSM 2379 3694 2262 0.61 338969 Rhodoferax ferrireducens T118 4401 2874 0.65 339670 Burkholderia ambifaria AMMD 6600 4209 0.64 339671 Actinobacillus succinogenes 130Z 2077 1505 0.72 339724 Ajellomyces capsulatus NAm1 9252 4067 0.44 339860 Methanosphaera stadtmanae DSM 3091 1533 967 0.63 340047 Mycoplasma capricolum subsp. capricolum ATCC 27343 814 471 0.58 340099 Thermoanaerobacter pseudethanolicus ATCC 33223 2197 1458 0.66 340100 Bordetella petrii DSM 12804 4912 3108 0.63 340102 Pyrobaculum arsenaticum DSM 13514 2296 1186 0.52 340177 Chlorobium chlorochromatii CaD3 1986 1240 0.62 340322 Corynebacterium glutamicum R 3078 1751 0.57 340907 Papiine herpesvirus 2 165 34 0.21 341663 Aspergillus terreus NIH2624 10402 5563 0.53 341946 Woodchuck hepatitis virus 2 5 3 0.60 341980 Human herpesvirus 3 strain Oka vaccine 75 31 0.41 342108 Magnetospirillum magneticum AMB-1 4516 2644 0.59 342109 Xanthomonas oryzae pv. oryzae MAFF 311018 4203 2400 0.57 342451 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 2406 1554 0.65 342610 Pseudoalteromonas atlantica T6c 4271 2709 0.63 343462 Human adenovirus 11p 4 1 0.25 343463 Human adenovirus 11a 45 18 0.40 343509 Sodalis glossinidius str. 'morsitans' 2490 1512 0.61 344609 Shigella boydii CDC 3083-94 4143 2518 0.61 344612 Aspergillus clavatus NRRL 1 9120 4955 0.54 345073 Vibrio cholerae O395 4206 2404 0.57 345184 Cabbage leal curl virus isolate Jamaica 29 21 0.72 345201 Invertebrate iridescent virus 3 126 36 0.29 347253 Streptococcus salivarius JIM8777 1978 1287 0.65 347255 Rickettsia africae ESF-5 1041 638 0.61 347256 Mycoplasma hominis ATCC 23114 529 348 0.66 347257 Mycoplasma agalactiae PG2 725 421 0.58 347834 Rhizobium etli CFN 42 5922 3822 0.65 348136 Human rotavirus B219 11 5 0.45 348780 Natronomonas pharaonis DSM 2160 2784 1513 0.54 349101 Rhodobacter sphaeroides ATCC 17029 4112 2636 0.64 349102 Rhodobacter sphaeroides ATCC 17025 4208 2575 0.61 349106 Psychrobacter sp. PRwf-1 2339 1539 0.66 349124 Halorhodospira halophila SL1 2411 1637 0.68 349161 Desulfotomaculum reducens MI-1 3220 1972 0.61 349163 Acidiphilium cryptum JF-5 3521 2313 0.66 349307 Methanosaeta thermophila PT 1673 1078 0.64 349344 Bat SARS CoV Rp3/2004 13 4 0.31 349519 Leuconostoc citreum KM20 1812 1231 0.68 349520 Paenibacillus polymyxa E681 4788 2980 0.62 349521 Hahella chejuensis KCTC 2396 6751 3500 0.52 349741 Akkermansia muciniphila ATCC BAA-835 2137 1288 0.60 349746 Yersinia pestis Angola 3821 2272 0.59 349747 Yersinia pseudotuberculosis IP 31758 4305 2449 0.57 350054 Mycobacterium gilvum PYR-GCK 5499 3385 0.62 350058 Mycobacterium vanbaalenii PYR-1 5917 3660 0.62 350688 Alkaliphilus oremlandii OhILAs 2828 1778 0.63 351160 uncultured methanogenic archaeon RC-I 3071 1652 0.54 351348 Marinobacter aquaeolei VT8 4170 2544 0.61 351605 Geobacter uraniireducens Rf4 4255 2620 0.62 351607 Acidothermus cellulolyticus 11B 2158 1449 0.67 351627 Caldicellulosiruptor saccharolyticus DSM 8903 2629 1618 0.62 351669 Measles virus strain Biken 1 1 1.00 351745 Shewanella sp. W3-18-1 4007 2425 0.61 351746 Pseudomonas putida F1 5245 3372 0.64 352520 Influenza A virus (A/mallard/Alberta/35/1976(H1N1)) 6 5 0.83 352551 Influenza A virus (A/duck/Hong Kong/7/1975(H3N2)) 13 11 0.85 353152 Cryptosporidium parvum Iowa II 3800 1654 0.44 353153 Trypanosoma cruzi strain CL Brener 19238 6948 0.36 354242 Campylobacter jejuni subsp. jejuni 81-176 1805 1115 0.62 355276 Leptospira borgpetersenii serovar Hardjo-bovis L550 2872 1646 0.57 355277 Leptospira borgpetersenii serovar Hardjo-bovis JB197 2829 1616 0.57 355278 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 3595 2023 0.56 355315 Streptococcus agalactiae serogroup Ia 1983 1290 0.65 356386 Hepatitis C virus (isolate India) 1 1 1.00 356390 Hepatitis C virus SA13 1 1 1.00 356391 Hepatitis C virus (isolate 6a33) 1 1 1.00 356410 Hepatitis C virus (isolate HC-G9) 1 1 1.00 356411 Hepatitis C virus JFH-1 1 1 1.00 356412 Hepatitis C virus (isolate JPUT971017) 1 1 1.00 356413 Hepatitis C virus (isolate BEBE1) 1 1 1.00 356414 Hepatitis C virus (isolate VAT96) 1 1 1.00 356415 Hepatitis C virus (isolate NZL1) 1 1 1.00 356416 Hepatitis C virus (isolate HCV-K3a/650) 1 1 1.00 356417 Hepatitis C virus (isolate JK049) 1 1 1.00 356418 Hepatitis C virus ED43 2 2 1.00 356419 Hepatitis C virus (isolate EUH1480) 1 1 1.00 356420 Hepatitis C virus (isolate EUHK2) 1 1 1.00 356421 Hepatitis C virus (isolate Th580) 1 1 1.00 356422 Hepatitis C virus (isolate VN235) 1 1 1.00 356423 Hepatitis C virus (isolate JK046) 1 1 1.00 356424 Hepatitis C virus (isolate VN004) 1 1 1.00 356425 Hepatitis C virus (isolate VN405) 1 1 1.00 356663 Xenotropic MuLV-related virus VP35 3 3 1.00 356664 Xenotropic MuLV-related virus VP42 3 3 1.00 357244 Orientia tsutsugamushi str. Boryong 967 538 0.56 357348 Burkholderia pseudomallei 1106a 7145 3538 0.50 357355 Hepatitis C virus (isolate Tr Kj) 1 1 1.00 357544 Helicobacter pylori HPAG1 1541 961 0.62 357804 Psychromonas ingrahamii 37 3530 2257 0.64 357808 Roseiflexus sp. RS-1 4494 2713 0.60 357809 Clostridium phytofermentans ISDg 3891 2500 0.64 358681 Brevibacillus brevis NBRC 100599 5887 3285 0.56 359391 Brucella melitensis biovar Abortus 2308 3024 1913 0.63 359786 Staphylococcus aureus subsp. aureus JH9 2708 1653 0.61 359787 Staphylococcus aureus subsp. aureus JH1 2761 1649 0.60 360094 Xanthomonas oryzae pv. oryzae PXO99A 4587 2414 0.53 360095 Bartonella bacilliformis KC583 1255 800 0.64 360102 Yersinia pestis Antiqua 4135 2514 0.61 360104 Campylobacter concisus 13826 2063 1146 0.56 360105 Campylobacter curvus 525.92 1928 1217 0.63 360106 Campylobacter fetus subsp. fetus 82-40 1715 1128 0.66 360107 Campylobacter hominis ATCC BAA-381 1687 925 0.55 360109 Campylobacter jejuni subsp. doylei 269.97 1712 1047 0.61 360115 Coxiella burnetii RSA 331 1891 997 0.53 360393 Breda virus serotype 1 6 4 0.67 360910 Bordetella avium 197N 3372 2192 0.65 360911 Exiguobacterium sp. AT1b 3021 1862 0.62 361100 Bacillus cereus Q1 5459 3012 0.55 362242 Mycobacterium ulcerans Agy99 4208 2614 0.62 362651 Human immunodeficiency virus type 1 (isolate YU2) 9 9 1.00 362663 Escherichia coli 536 4605 2920 0.63 362948 Lactobacillus salivarius UCC118 1998 1229 0.62 362976 Haloquadratum walsbyi DSM 16790 2645 1405 0.53 363066 Influenza A virus (A/South Canterbury/35/2000(H1N1)) 11 9 0.82 363253 Lawsonia intracellularis PHE/MN1-00 1342 894 0.67 364106 Escherichia coli UTI89 5198 3080 0.59 364370 Turkey astrovirus 1 36 30 0.83 365044 Polaromonas naphthalenivorans CJ2 4887 2828 0.58 365089 Influenza A virus (A/goose/Guangxi/345/2005(H5N1)) 11 9 0.82 365659 Streptococcus mitis B6 1978 1255 0.63 366394 Sinorhizobium medicae WSM419 6148 3915 0.64 366602 Caulobacter sp. K31 5373 3187 0.59 367110 Neurospora crassa OR74A 9841 4158 0.42 367737 Arcobacter butzleri RM4018 2254 1451 0.64 367775 Cryptococcus gattii WM276 6560 3303 0.50 367830 Staphylococcus aureus subsp. aureus USA300 2607 1652 0.63 367928 Bifidobacterium adolescentis ATCC 15703 1629 1079 0.66 368407 Methanoculleus marisnigri JR1 2476 1458 0.59 368408 Thermofilum pendens Hrk 5 1876 1031 0.55 369723 Salinispora tropica CNB-440 4524 2762 0.61 370354 Entamoeba dispar SAW760 8606 3908 0.45 370438 Pelotomaculum thermopropionicum SI 2884 1747 0.61 370551 Streptococcus pyogenes MGAS9429 1868 1162 0.62 370552 Streptococcus pyogenes MGAS10270 1964 1213 0.62 370553 Streptococcus pyogenes MGAS2096 1885 1221 0.65 370554 Streptococcus pyogenes MGAS10750 1964 1225 0.62 371094 Chikungunya virus strain S27-African prototype 2 2 1.00 371095 Chikungunya virus strain Senegal 37997 2 2 1.00 371096 Chikungunya virus strain Nagpur 1 1 1.00 372461 Buchnera aphidicola BCc 362 327 0.90 373153 Streptococcus pneumoniae D39 1923 1232 0.64 373193 Xenotropic MuLV-related virus VP62 3 3 1.00 373384 Shigella flexneri 5 str. 8401 3867 2562 0.66 373903 Halothermothrix orenii H 168 2324 1538 0.66 374463 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 595 523 0.88 374596 Eastern equine encephalitis virus (strain PE-0.0155) 2 2 1.00 374597 Eastern equine encephalitis virus (strain PE-3.0815) 2 2 1.00 374598 Eastern equine encephalitis virus (strain Florida 91-469) 2 2 1.00 374833 Neisseria meningitidis 053442 1998 1189 0.60 374847 Candidatus Korarchaeum cryptofilum OPF8 1602 1005 0.63 374930 Haemophilus influenzae PittEE 1615 1195 0.74 374931 Haemophilus influenzae PittGG 1662 1140 0.69 374989 O'nyong-nyong virus (strain SG650) 2 2 1.00 374990 Mayaro virus (strain Brazil) 2 2 1.00 375286 Janthinobacterium sp. Marseille 3695 2310 0.63 375451 Roseobacter denitrificans OCh 114 4119 2497 0.61 376262 Rubella virus strain BRD1 2 2 1.00 376263 Rubella virus strain BRDII 2 2 1.00 376264 Rubella virus strain TO-336 2 2 1.00 376265 Rubella virus strain TO-336 vaccine 2 2 1.00 376266 Rubella virus strain Cendehill 2 2 1.00 376267 Rubella virus strain RN-UK86 2 2 1.00 376610 Venezuelan equine encephalitis virus (strain CPA201) 1 1 1.00 376619 Francisella tularensis subsp. holarctica LVS 1678 1083 0.65 376686 Flavobacterium johnsoniae UW101 5020 2680 0.53 377628 Yersinia pestis Nepal516 4869 2764 0.57 377629 Teredinibacter turnerae T7901 4250 2443 0.57 378753 Kocuria rhizophila DC2201 2352 1560 0.66 378806 Stigmatella aurantiaca DW4/3-1 12954 6658 0.51 378809 Ravn virus - Ravn, Kenya, 1987 24 10 0.42 378830 Lake Victoria marburgvirus - Angola2005 11 7 0.64 379066 Gemmatimonas aurantiaca T-27 3932 2245 0.57 379508 Lodderomyces elongisporus NRRL YB-4239 5779 3021 0.52 379731 Pseudomonas stutzeri A1501 4092 2657 0.65 379756 Influenza A virus (A/New Jersey/8/1976(H1N1)) 14 12 0.86 380213 Influenza A virus (A/Taiwan/1/1986(H1N1)) 27 25 0.93 380216 Influenza A virus (A/swine/Hong Kong/3/1976(H3N2)) 2 2 1.00 380217 Influenza A virus (A/swine/Hong Kong/4/1976(H3N2)) 1 1 1.00 380282 Influenza A virus (A/Fort Monmouth/1/1947-mouse adapted(H1N1)) 11 10 0.91 380285 Influenza A virus (A/turkey/Ireland/1378/1983(H5N8)) 11 9 0.82 380337 Influenza A virus (A/equine/Prague/1/1956(H7N7)) 18 16 0.89 380340 Influenza A virus (A/equine/London/1416/1973(H7N7)) 7 6 0.86 380341 Influenza A virus (A/swine/Iowa/17672/1988(H1N1)) 16 14 0.88 380342 Influenza A virus (A/swine/Iowa/15/1930(H1N1)) 16 15 0.94 380346 Influenza A virus (A/Wisconsin/3523/1988(H1N1)) 6 6 1.00 380347 Influenza A virus (A/swine/Netherlands/12/1985(H1N1)) 7 7 1.00 380349 Influenza A virus (A/turkey/Minnesota/1661/1981(H1N1)) 3 3 1.00 380394 Acidithiobacillus ferrooxidans ATCC 53993 2747 1667 0.61 380703 Aeromonas hydrophila subsp. hydrophila ATCC 7966 4122 2767 0.67 380749 Hydrogenobaculum sp. Y04AAS1 1626 1043 0.64 380949 Influenza A virus (A/Beijing/353/1989(H3N2)) 16 15 0.94 380960 Influenza A virus (A/Tokyo/3/1967(H2N2)) 10 9 0.90 380983 Influenza A virus (A/Leningrad/134/47/1957(H2N2)) 9 8 0.89 380984 Influenza A virus (A/Leningrad/134/17/1957(H2N2)) 10 9 0.90 380985 Influenza A virus (A/Chile/1/1983(H1N1)) 11 9 0.82 381516 Influenza A virus (A/USSR/90/1977(H1N1)) 16 14 0.88 381517 Influenza A virus (A/Udorn/307/1972(H3N2)) 10 9 0.90 381518 Influenza A virus (A/Wilson-Smith/1933(H1N1)) 32 29 0.91 381666 Ralstonia eutropha H16 6614 4499 0.68 381754 Pseudomonas aeruginosa PA7 6246 3661 0.59 381764 Fervidobacterium nodosum Rt17-B1 1726 1176 0.68 382245 Aeromonas salmonicida subsp. salmonicida A449 4342 2644 0.61 382638 Helicobacter acinonychis str. Sheeba 1596 943 0.59 382640 Bartonella tribocorum CIP 105476 1962 1103 0.56 382781 Influenza A virus (A/Singapore/1/1957(H2N2)) 24 21 0.88 382812 Influenza A virus (A/Guangdong/39/1989(H3N2)) 7 7 1.00 382825 Influenza A virus (A/Philippines/2/1982(H3N2)) 17 15 0.88 382828 Influenza A virus (A/RI/5-/1957(H2N2)) 7 7 1.00 382838 Influenza A virus (A/chicken/Germany/N/1949(H10N7)) 25 21 0.84 382842 Influenza A virus (A/swine/29/1937(H1N1)) 5 5 1.00 382844 Influenza A virus (A/swine/Cambridge/1/1935(H1N1)) 1 1 1.00 382846 Influenza A virus (A/swine/Dandong/9/1983(H3N2)) 1 1 1.00 382848 Influenza A virus (A/swine/Hong Kong/126/1982(H3N2)) 10 9 0.90 382851 Influenza A virus (A/swine/Italy/839/1989(H1N1)) 1 1 1.00 382855 Influenza A virus (A/swine/Wisconsin/1/1967(H1N1)) 11 9 0.82 383372 Roseiflexus castenholzii DSM 13941 4324 2632 0.61 383530 Influenza A virus (A/swine/Italy/141/1981(H1N1)) 1 1 1.00 383531 Influenza A virus (A/swine/Italy/2/1979(H1N1)) 1 1 1.00 383532 Influenza A virus (A/swine/Italy/437/1976(H1N1)) 1 1 1.00 383533 Influenza A virus (A/swine/Wisconsin/1/1961(H1N1)) 11 9 0.82 383534 Influenza A virus (A/swine/Wisconsin/1/1957(H1N1)) 12 10 0.83 383535 Influenza A virus (A/swine/May/1954(H1N1)) 3 3 1.00 383536 Influenza A virus (A/swine/41/1949(H1N1)) 1 1 1.00 383537 Influenza A virus (A/swine/Iowa/1946(H1N1)) 1 1 1.00 383538 Influenza A virus (A/swine/Jamesburg/1942(H1N1)) 12 10 0.83 383539 Influenza A virus (A/swine/Ohio/23/1935(H1N1)) 12 10 0.83 383541 Influenza A virus (A/England/19/1955(H1N1)) 1 1 1.00 383543 Influenza A virus (A/Hickox/1940(H1N1)) 11 9 0.82 383546 Influenza A virus (A/teal/Iceland/29/1980(H7N7)) 1 1 1.00 383547 Influenza A virus (A/duck/Australia/749/1980(H1N1)) 13 11 0.85 383550 Influenza A virus (A/duck/England/1/1956(H11N6)) 24 21 0.88 383551 Influenza A virus (A/fowl/Dobson/'Dutch'/1927(H7N7)) 1 1 1.00 383567 Influenza A virus (A/Shanghai/16/1989(H3N2)) 2 2 1.00 383568 Influenza A virus (A/Shanghai/11/1987(H3N2)) 3 3 1.00 383569 Influenza A virus (A/Shanghai/31/1980(H3N2)) 2 2 1.00 383570 Influenza A virus (A/Shanghai/6/1990(H3N2)) 2 2 1.00 383571 Influenza A virus (A/Memphis/6/1986(H3N2)) 2 2 1.00 383572 Influenza A virus (A/Memphis/14/1985(H3N2)) 1 1 1.00 383575 Influenza A virus (A/Memphis/5/1980(H3N2)) 1 1 1.00 383578 Influenza A virus (A/Memphis/4/1980(H3N2)) 11 9 0.82 383579 Influenza A virus (A/Memphis/18/1978(H3N2)) 11 9 0.82 383580 Influenza A virus (A/Memphis/2/1978(H3N2)) 11 9 0.82 383581 Influenza A virus (A/Memphis/110/1976(H3N2)) 11 9 0.82 383582 Influenza A virus (A/Memphis/1/1973(H3N2)) 1 1 1.00 383583 Influenza A virus (A/Memphis/101/1972(H3N2)) 11 9 0.82 383586 Influenza A virus (A/Memphis/1/1971(H3N2)) 13 11 0.85 383588 Influenza A virus (A/Memphis/8/1988(H3N2)) 16 14 0.88 383589 Influenza A virus (A/Memphis/3/1988(H3N2)) 12 10 0.83 383592 Influenza A virus (A/Guangdong/9/1987(H3N2)) 2 2 1.00 383593 Influenza A virus (A/Guangdong/38/1977(H3N2)) 1 1 1.00 383595 Influenza A virus (A/Beijing/337/1989(H3N2)) 1 1 1.00 383596 Influenza A virus (A/Beijing/39/1975(H3N2)) 11 9 0.82 383597 Influenza A virus (A/Beijing/352/1989(H3N2)) 4 4 1.00 383603 Influenza A virus (A/turkey/Minnesota/833/1980(H4N2)) 11 9 0.82 384479 Influenza A virus (A/swine/Tennessee/26/1977(H1N1)) 3 3 1.00 384482 Influenza A virus (A/swine/Iowa/1976/1931(H1N1)) 2 2 1.00 384483 Influenza A virus (A/swine/Hong Kong/127/1982(H3N2)) 5 5 1.00 384484 Influenza A virus (A/swine/Hong Kong/81/1978(H3N2)) 12 9 0.75 384485 Influenza A virus (A/swine/Hong Kong/6/1976(H3N2)) 2 2 1.00 384487 Influenza A virus (A/Swine/Indiana/1726/1988(H1N1)) 15 14 0.93 384493 Influenza A virus (A/seal/Mass/1/1980(H7N7)) 12 9 0.75 384495 Influenza A virus (A/Kiev/59/1979(H1N1)) 5 5 1.00 384498 Influenza A virus (A/Ann Arbor/6/1960(H2N2)) 14 10 0.71 384499 Influenza A virus (A/gull/Maryland/704/1977(H13N6)) 27 23 0.85 384500 Influenza A virus (A/Beijing/11/1956(H1N1)) 1 1 1.00 384501 Influenza A virus (A/swine/Ontario/2/1981(H1N1)) 15 13 0.87 384502 Influenza A virus (A/mallard/New York/6750/1978(H2N2)) 11 10 0.91 384505 Influenza A virus (A/nt/60/1968(H3N2)) 9 8 0.89 384518 Influenza A virus (A/mallard/New York/6874/1978(H3N2)) 11 8 0.73 384525 Influenza A virus (A/Fort Warren/1/1950(H1N1)) 8 7 0.88 384616 Pyrobaculum islandicum DSM 4184 1976 1063 0.54 384676 Pseudomonas entomophila L48 5126 3214 0.63 385576 Influenza A virus (A/Alaska/6/1977(H3N2)) 2 1 0.50 385586 Influenza A virus (A/chicken/Pennsylvania/1/1983(H5N2)) 12 10 0.83 385590 Influenza A virus (A/duck/Czechoslovakia/1956(H4N6)) 21 18 0.86 385596 Influenza A virus (A/Ohio/4/1983(H1N1)) 1 1 1.00 385597 Influenza A virus (A/gull/Minnesota/945/1980(H13N6)) 11 9 0.82 385606 Influenza A virus (A/swine/Tennessee/24/1977(H1N1)) 4 4 1.00 385620 Influenza A virus (A/turkey/Wisconsin/1/1966(H9N2)) 24 20 0.83 385624 Influenza A virus (A/Port Chalmers/1/1973(H3N2)) 14 12 0.86 385630 Influenza A virus (A/Bangkok/1/1979(H3N2)) 15 14 0.93 385640 Influenza A virus (A/Memphis/102/1972(H3N2)) 13 11 0.85 385644 Influenza A virus (A/swine/Ukkel/1/1984(H3N2)) 1 1 1.00 385645 Influenza A virus (A/swine/Colorado/1/1977(H3N2)) 12 10 0.83 386032 Reston ebolavirus - Reston (1989) 9 6 0.67 386033 Sudan ebolavirus - Uganda (2000) 9 6 0.67 386043 Listeria welshimeri serovar 6b str. SLCC5334 2769 1775 0.64 386415 Clostridium novyi NT 2305 1503 0.65 386656 Yersinia pestis Pestoides F 3942 2416 0.61 387092 Nitratiruptor sp. SB155-2 1843 1233 0.67 387093 Sulfurovum sp. NBC37-1 2433 1457 0.60 387139 Influenza A virus (A/Aichi/2/1968(H3N2)) 11 10 0.91 387147 Influenza A virus (A/England/878/1969(H3N2)) 10 9 0.90 387159 Influenza A virus (A/Hong Kong/5/1983(H3N2)) 11 9 0.82 387161 Influenza A virus (A/Japan/305/1957(H2N2)) 34 31 0.91 387163 Influenza A virus (A/Leningrad/134/1957(H2N2)) 10 9 0.90 387191 Influenza A virus (A/camel/Mongolia/1982(H1N1)) 7 7 1.00 387203 Influenza A virus (A/duck/Bavaria/2/1977(H1N1)) 4 4 1.00 387207 Influenza A virus (A/duck/Hokkaido/8/1980(H3N8)) 11 9 0.82 387344 Lactobacillus brevis ATCC 367 2201 1364 0.62 387662 Candidatus Carsonella ruddii PV 182 144 0.79 388396 Vibrio fischeri MJ11 4034 2420 0.60 388796 HIV-1 M:C_ETH2220 9 9 1.00 388812 HIV-1 M:C_92BR025 9 9 1.00 388813 HIV-1 M:F1_VI850 9 9 1.00 388814 HIV-1 M:F1_93BR020 9 9 1.00 388815 HIV-1 M:F2_MP255C 8 8 1.00 388816 HIV-1 O_MVP5180 9 9 1.00 388818 HIV-1 N_YBF30 9 9 1.00 388819 HIV-1 N_YBF106 9 9 1.00 388821 HIV-2 B_EHO 10 6 0.60 388822 HIV-2 B_UC1 9 6 0.67 388823 HIV-1 M:F2_MP257C 8 8 1.00 388824 HIV-1 M:G_SE6165 7 7 1.00 388825 HIV-1 M:G_92NG083 8 8 1.00 388826 HIV-1 M:H_90CF056 9 9 1.00 388888 HIV-1 M:H_VI991 8 8 1.00 388904 HIV-1 M:J_SE9173 8 8 1.00 388905 HIV-1 M:J_SE9280 8 8 1.00 388906 HIV-1 M:K_96CM-MP535 8 8 1.00 388907 HIV-1 M:K_97ZR-EQTB11 8 8 1.00 388910 SIVcpz TAN1 9 8 0.89 388911 SIVcpz MB66 9 9 1.00 388912 SIVcpz EK505 9 9 1.00 388919 Streptococcus sanguinis SK36 2269 1436 0.63 389167 Bat CoV 279/2005 12 4 0.33 389230 Bat coronavirus (BtCoV/133/2005) 10 4 0.40 390235 Pseudomonas putida W619 5179 3292 0.64 390236 Borrelia afzelii PKo 1886 830 0.44 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 1522 966 0.63 390874 Thermotoga petrophila RKU-1 1784 1261 0.71 391008 Stenotrophomonas maltophilia R551-3 4026 2458 0.61 391009 Thermosipho melanesiensis BI429 1877 1203 0.64 391037 Salinispora arenicola CNS-205 4848 2896 0.60 391038 Burkholderia phymatum STM815 7465 4662 0.62 391165 Granulibacter bethesdensis CGDNIH1 2430 1611 0.66 391295 Streptococcus suis 05ZYH33 2178 1403 0.64 391296 Streptococcus suis 98HAH33 2179 1378 0.63 391595 Roseobacter litoralis Och 149 4500 2746 0.61 391735 Verminephrobacter eiseniae EF01-2 4911 3236 0.66 391774 Desulfovibrio vulgaris DP4 3085 1961 0.64 391896 Rickettsia bellii OSU 85-389 1443 736 0.51 391904 Bifidobacterium longum subsp. infantis ATCC 15697 3196 1702 0.53 392021 Rickettsia rickettsii str. 'Sheila Smith' 1345 631 0.47 392499 Sphingomonas wittichii RW1 5317 3548 0.67 392500 Shewanella woodyi ATCC 51908 4865 2877 0.59 392809 Influenza A virus (A/Victoria/3/1975(H3N2)) 7 7 1.00 393011 Francisella tularensis subsp. holarctica OSU18 1510 970 0.64 393115 Francisella tularensis subsp. tularensis FSC198 1528 990 0.65 393305 Yersinia enterocolitica subsp. enterocolitica 8081 4021 2590 0.64 393557 Influenza A virus (A/Leningrad/1954/1(H1N1)) 5 4 0.80 393560 Influenza A virus (A/Brazil/11/1978(H1N1)) 13 11 0.85 393562 Influenza A virus (A/India/6263/1980(H1N1)) 11 9 0.82 393563 Influenza A virus (A/England/321/1977(H3N2)) 1 1 1.00 393595 Alcanivorax borkumensis SK2 2756 1819 0.66 394221 Maricaulis maris MCS10 3060 1871 0.61 394239 Koala retrovirus 3 3 1.00 394503 Clostridium cellulolyticum H10 3289 1969 0.60 394786 Influenza A virus (A/Nanchang/11/1996(H1N1)) 11 9 0.82 395019 Burkholderia multivorans ATCC 17616 7214 4527 0.63 395491 Rhizobium leguminosarum bv. trifolii WSM1325 6988 4407 0.63 395492 Rhizobium leguminosarum bv. trifolii WSM2304 6403 4152 0.65 395494 Gallionella capsiferriformans ES-2 2853 1754 0.61 395495 Leptothrix cholodnii SP-6 4343 2823 0.65 395960 Rhodopseudomonas palustris TIE-1 5245 3148 0.60 395961 Cyanothece sp. PCC 7425 5232 2707 0.52 395963 Beijerinckia indica subsp. indica ATCC 9039 3774 2301 0.61 395965 Methylocella silvestris BL2 3816 2267 0.59 396513 Staphylococcus carnosus subsp. carnosus TM300 2460 1598 0.65 396588 Thioalkalivibrio sulfidophilus HL-EbGr7 3272 1926 0.59 396595 Thioalkalivibrio sp. K90mix 2823 1711 0.61 397342 Horsepox virus 228 66 0.29 397945 Acidovorax citrulli AAC00-1 4602 2667 0.58 397948 Caldivirga maquilingensis IC-167 1962 1152 0.59 398511 Bacillus pseudofirmus OF4 4312 2350 0.54 398527 Burkholderia phytofirmans PsJN 7197 4568 0.63 398577 Burkholderia ambifaria MC40-6 6690 4171 0.62 398578 Delftia acidovorans SPH-1 5968 3602 0.60 398579 Shewanella pealeana ATCC 700345 4181 2561 0.61 398580 Dinoroseobacter shibae DFL 12 4086 2503 0.61 398767 Geobacter lovleyi SZ 3644 2283 0.63 399549 Metallosphaera sedula DSM 5348 2256 1290 0.57 399550 Staphylothermus marinus F1 1570 897 0.57 399599 Shewanella baltica OS195 4619 2654 0.57 399726 Thermoanaerobacter sp. X514 2323 1528 0.66 399739 Pseudomonas mendocina ymp 4563 2959 0.65 399741 Serratia proteamaculans 568 4930 3293 0.67 399742 Enterobacter sp. 638 4238 2782 0.66 400667 Acinetobacter baumannii ATCC 17978 3798 2248 0.59 400668 Marinomonas sp. MWYL1 4416 2957 0.67 400673 Legionella pneumophila str. Corby 3202 1715 0.54 401473 Bifidobacterium dentium Bd1 2121 1400 0.66 401614 Francisella novicida U112 1721 1115 0.65 401671 HIV-1 M:B_89.6 9 9 1.00 402036 HTLV-3 strain 2026ND 6 5 0.83 402046 HTLV-1 isolate Mel 15 7 6 0.86 402464 Influenza A virus (A/gray teal/Australia/2/1979(H4N4)) 12 10 0.83 402520 Influenza A virus (A/chicken/Victoria/1985(H7N7)) 11 9 0.82 402525 Influenza A virus (A/starling/Victoria/5156/1985(H7N7)) 10 8 0.80 402527 Influenza A virus (A/chicken/Scotland/1959(H5N1)) 21 18 0.86 402612 Flavobacterium psychrophilum JIP02/86 2408 1397 0.58 402626 Ralstonia pickettii 12J 4890 3014 0.62 402676 Schizosaccharomyces japonicus yFS275 4789 2849 0.59 402880 Methanococcus maripaludis C5 1821 1126 0.62 402881 Parvibaculum lavamentivorans DS-1 3580 2261 0.63 402882 Shewanella baltica OS185 4367 2593 0.59 403677 Phytophthora infestans T30-4 17605 7060 0.40 403833 Petrotoga mobilis SJ95 1890 1332 0.70 404380 Geobacter bemidjiensis Bem 4048 2541 0.63 404589 Anaeromyxobacter sp. Fw109-5 4461 2731 0.61 405416 Acinetobacter baumannii ACICU 3745 2233 0.60 405440 Xylella fastidiosa M12 2056 1188 0.58 405441 Xylella fastidiosa M23 2163 1236 0.57 405531 Bacillus cereus G9842 5844 2985 0.51 405532 Bacillus cereus B4264 5384 2887 0.54 405534 Bacillus cereus AH187 5747 2970 0.52 405535 Bacillus cereus AH820 5798 3012 0.52 405566 Lactobacillus helveticus DPC 4571 1580 1078 0.68 405948 Saccharopolyspora erythraea NRRL 2338 7173 4514 0.63 405955 Escherichia coli APEC O1 4870 2977 0.61 406327 Methanococcus vannielii SB 1661 1085 0.65 406425 Burkholderia cenocepacia MC0-3 6986 4575 0.65 406769 Human T-cell leukemia virus 3 (strain Pyl43) 6 5 0.83 406817 Xenorhabdus nematophila ATCC 19061 4439 2277 0.51 406818 Xenorhabdus bovienii SS-2004 4102 2131 0.52 407134 Yellow fever virus strain Ghana/Asibi/1927 1 1 1.00 407135 Yellow fever virus strain French neurotropic vaccine 1 1 1.00 407136 Yellow fever virus isolate Ivory Coast/1999 1 1 1.00 407137 Yellow fever virus Trinidad/79A/1979 1 1 1.00 407138 Yellow fever virus isolate Ivory Coast/85-82H/1982 1 1 1.00 407139 Yellow fever virus isolate Uganda/A7094A4/1948 1 1 1.00 407140 Yellow fever virus isolate Angola/14FA/1971 1 1 1.00 407141 Yellow fever virus isolate Ethiopia/Couma/1961 1 1 1.00 407148 Campylobacter jejuni subsp. jejuni 81116 1622 1069 0.66 407976 Shewanella baltica OS223 4384 2565 0.59 408685 Dengue virus 1 Brazil/97-11/1997 1 1 1.00 408686 Dengue virus 4 Philippines/H241/1956 1 1 1.00 408687 Dengue virus 4 Singapore/8976/1995 1 1 1.00 408688 Dengue virus 4 Thailand/0348/1991 1 1 1.00 408689 Dengue virus 4 Thailand/0476/1997 1 1 1.00 408690 Dengue virus 3 China/80-2/1980 1 1 1.00 408691 Dengue virus 3 Martinique/1243/1999 1 1 1.00 408692 Dengue virus 3 Sri Lanka/1266/2000 1 1 1.00 408693 Dengue virus 3 Singapore/8120/1995 1 1 1.00 408694 Dengue virus 2 Peru/IQT2913/1996 1 1 1.00 408870 Dengue virus 3 Philippines/H87/1956 1 1 1.00 408871 Dengue virus 4 Dominica/814669/1981 1 1 1.00 409438 Escherichia coli SE11 4979 2911 0.58 410289 Mycobacterium bovis BCG str. Pasteur 1173P2 3894 2290 0.59 410358 Methanocorpusculum labreanum Z 1739 1113 0.64 410359 Pyrobaculum calidifontis JCM 11548 2148 1151 0.54 411154 Gramella forsetii KT0803 3554 1919 0.54 412022 Burkholderia mallei NCTC 10229 4943 2812 0.57 412418 Borrelia recurrentis A1 977 540 0.55 412419 Borrelia duttonii Ly 1287 568 0.44 412694 Bacillus thuringiensis str. Al Hakam 4792 2926 0.61 412965 Candidatus Vesicomyosocius okutanii HA 936 733 0.78 413041 Dengue virus 2 Thailand/0168/1979 1 1 1.00 413404 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 976 762 0.78 413997 Escherichia coli B str. REL606 4142 2845 0.69 414004 Cenarchaeum symbiosum A 2022 935 0.46 414684 Rhodospirillum centenum SW 3984 2277 0.57 415426 Hyperthermus butylicus DSM 5456 1602 899 0.56 416269 Actinobacillus pleuropneumoniae serovar 5b str. L20 2004 1422 0.71 416276 Rickettsia massiliae MTU5 974 630 0.65 416348 Halorubrum lacusprofundi ATCC 49239 3497 1738 0.50 416591 Thermotoga lettingae TMO 2040 1467 0.72 416674 Influenza B virus (B/Yamagata/16/1988) 17 14 0.82 416730 Influenza A virus (A/Memphis/10/1996(H1N1)) 11 9 0.82 416870 Lactococcus lactis subsp. cremoris MG1363 2390 1481 0.62 418127 Staphylococcus aureus subsp. aureus Mu3 2684 1609 0.60 418136 Francisella tularensis subsp. tularensis WY96-3418 1573 1024 0.65 418459 Puccinia graminis f. sp. tritici CRL 75-36-700-3 20437 4694 0.23 419610 Methylobacterium extorquens PA1 4822 2813 0.58 419665 Methanococcus aeolicus Nankai-3 1490 988 0.66 419942 Sulfolobus islandicus Y.N.15.51 2853 1530 0.54 419947 Mycobacterium tuberculosis H37Ra 3991 2274 0.57 420174 Hepatitis C virus isolate HC-J4 1 1 1.00 420246 Geobacillus thermodenitrificans NG80-2 3424 2101 0.61 420247 Methanobrevibacter smithii ATCC 35061 1783 1098 0.62 420662 Methylibium petroleiphilum PM1 4359 2560 0.59 421877 Hepatitis C virus isolate HC-J1 1 1 1.00 421879 Hepatitis C virus isolate HCR6 1 1 1.00 423211 Streptococcus suis GZ1 1968 1285 0.65 423212 Legionella pneumophila 2300/99 Alcoy 3184 1745 0.55 423368 Salmonella enterica subsp. enterica serovar Newport str. SL254 4784 2848 0.60 423447 KI polyomavirus Stockholm 350 4 3 0.75 425011 Aspergillus niger CBS 513.88 14089 6348 0.45 425104 Shewanella sediminis HAW-EB3 4493 2815 0.63 425265 Malassezia globosa CBS 7966 4275 2403 0.56 425551 Influenza A virus (A/AA/Huston/1945(H1N1)) 11 9 0.82 425557 Influenza A virus (A/California/10/1978(H1N1)) 12 10 0.83 425562 Influenza A virus (A/Henry/1936(H1N1)) 11 9 0.82 425563 Influenza A virus (A/Iowa/1943(H1N1)) 11 9 0.82 425566 Influenza A virus (A/Malaya/302/1954(H1N1)) 11 9 0.82 425570 Influenza A virus (A/Phila/1935(H1N1)) 11 9 0.82 425580 Influenza A virus (A/Albany/12/1951(H1N1)) 11 9 0.82 425944 Sulfolobus islandicus L.D.8.5 2940 1513 0.51 426114 Thiomonas sp. 3As 3527 2171 0.62 426117 Methylobacterium sp. 4-46 6647 3786 0.57 426118 Sulfolobus islandicus M.16.4 2729 1481 0.54 426355 Methylobacterium radiotolerans JCM 2831 6388 3578 0.56 426368 Methanococcus maripaludis C7 1786 1115 0.62 426418 Pyrenophora tritici-repentis Pt-1C-BFP 12063 5206 0.43 426430 Staphylococcus aureus subsp. aureus str. Newman 2583 1599 0.62 427317 Sulfolobus islandicus M.14.25 2597 1454 0.56 427318 Sulfolobus islandicus M.16.27 2650 1479 0.56 428406 Ralstonia pickettii 12D 5315 3068 0.58 429314 Infectious hematopoietic necrosis virus - WRAC 6 2 0.33 429315 Infectious hematopoietic necrosis virus - Oregon69 6 2 0.33 429572 Sulfolobus islandicus L.S.2.15 2725 1514 0.56 430066 Brucella abortus S19 2996 1950 0.65 431241 Trichoderma reesei QM6a 9114 4734 0.52 431317 Triticum mosaic virus 2 2 1.00 431943 Clostridium kluyveri DSM 555 3828 2208 0.58 431946 Escherichia coli SE15 4461 2912 0.65 431947 Porphyromonas gingivalis ATCC 33277 2022 1140 0.56 434131 Neorickettsia risticii str. Illinois 898 526 0.59 434271 Actinobacillus pleuropneumoniae serovar 3 str. JL03 2026 1404 0.69 434488 Vesicular stomatitis Indiana virus (strain 98COE North America) 6 4 0.67 434489 Vesicular stomatitis Indiana virus (strain 94GUB Central America) 6 4 0.67 434490 Vesicular stomatitis Indiana virus (strain 85CLB South America) 6 4 0.67 434922 Coxiella burnetii Dugway 5J108-111 2029 1107 0.55 434923 Coxiella burnetii CbuG_Q212 1831 1022 0.56 434924 Coxiella burnetii CbuK_Q154 1915 1056 0.55 435590 Bacteroides vulgatus ATCC 8482 3982 2288 0.57 435591 Parabacteroides distasonis ATCC 8503 3830 2278 0.59 436017 Ostreococcus lucimarinus CCE9901 7404 3721 0.50 436114 Sulfurihydrogenibium sp. YO3AOP1 1712 1139 0.67 436308 Nitrosopumilus maritimus SCM1 1797 1013 0.56 436717 Acinetobacter sp. DR1 3879 2349 0.61 436907 Vanderwaltozyma polyspora DSM 70294 5353 2887 0.54 438753 Azorhizobium caulinodans ORS 571 4710 3100 0.66 439235 Desulfatibacillum alkenivorans AK-01 5198 3164 0.61 439292 Bacillus selenitireducens MLS10 3231 2047 0.63 439375 Ochrobactrum anthropi ATCC 49188 4765 3030 0.64 439386 Sulfolobus islandicus Y.G.57.14 2878 1502 0.52 439481 Aciduliprofundum boonei T469 3205 1906 0.59 439843 Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 4602 2778 0.60 439851 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 4606 2745 0.60 439855 Escherichia coli SMS-3-5 4876 3042 0.62 440085 Methylobacterium chloromethanicum CM4 5491 3020 0.55 440266 WU Polyomavirus 262 79 0.30 441375 Cryptosporidium muris RN66 3930 1721 0.44 441620 Methylobacterium populi BJ001 5325 2939 0.55 441768 Acholeplasma laidlawii PG-8A 1380 886 0.64 441770 Clostridium botulinum A str. ATCC 19397 3546 2167 0.61 441771 Clostridium botulinum A str. Hall 4237 2503 0.59 441772 Clostridium botulinum F str. Langeland 3655 2194 0.60 441952 Francisella tularensis subsp. mediasiatica FSC147 1388 944 0.68 441959 Talaromyces stipitatus ATCC 10500 12996 6967 0.54 441960 Penicillium marneffei ATCC 18224 10444 5843 0.56 442493 Enterococcus phage phiEF24C 221 22 0.10 442563 Bifidobacterium animalis subsp. lactis AD011 1525 1060 0.70 442736 Bat coronavirus HKU3 12 4 0.33 443143 Geobacter sp. M18 4407 2703 0.61 443144 Geobacter sp. M21 4069 2507 0.62 443226 Coccidioides posadasii str. Silveira 10212 4093 0.40 443239 Human coronavirus HKU1 (isolate N1) 9 4 0.44 443240 Human coronavirus HKU1 (isolate N2) 9 4 0.44 443241 Human coronavirus HKU1 (isolate N5) 9 4 0.44 443906 Clavibacter michiganensis subsp. michiganensis NCPPB 382 3078 1968 0.64 444157 Thermoproteus neutrophilus V24Sta 1965 1042 0.53 444158 Methanococcus maripaludis C6 1825 1091 0.60 444177 Lysinibacillus sphaericus C3-41 4751 2528 0.53 444178 Brucella ovis ATCC 25840 2820 1807 0.64 444179 Candidatus Sulcia muelleri GWSS 227 202 0.89 444318 Influenza A virus (A/Texas/1/1977(H3N2)) 4 4 1.00 444450 Escherichia coli O157:H7 str. EC4115 5279 2960 0.56 445790 Rabies virus India 5 3 0.60 445791 Rabies virus China/MRV 5 3 0.60 445792 Rabies virus China/DRV 5 3 0.60 445793 Rabies virus silver-haired bat-associated SHBRV 5 3 0.60 445932 Elusimicrobium minutum Pei191 1528 896 0.59 445985 Borrelia burgdorferi ZS7 1232 548 0.44 446462 Actinosynnema mirum DSM 43827 6912 4147 0.60 446465 Brachybacterium faecium DSM 4810 3063 2083 0.68 446466 Cellulomonas flavigena DSM 20109 3673 2221 0.60 446468 Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 5497 3417 0.62 446469 Sanguibacter keddieii DSM 10542 3710 2383 0.64 446470 Stackebrandtia nassauensis DSM 44728 6379 3701 0.58 446471 Xylanimonas cellulosilytica DSM 15894 3441 2050 0.60 446561 Australian bat lyssavirus bat/AUS/1996 5 3 0.60 446562 Australian bat lyssavirus human/AUS/1998 5 3 0.60 447093 Ajellomyces capsulatus G186AR 9214 3943 0.43 447217 Anaeromyxobacter sp. K 4444 2706 0.61 448385 Sorangium cellulosum 'So ce 56' 9320 4886 0.52 449447 Microcystis aeruginosa NIES-843 5988 2358 0.39 450149 Simian rotavirus A/SA11-H96 12 9 0.75 450851 Phenylobacterium zucineum HLK1 3838 2523 0.66 451516 Staphylococcus aureus subsp. aureus USA300_TCH1516 2694 1597 0.59 451804 Aspergillus fumigatus A1163 9923 5259 0.53 452471 Candidatus Amoebophilus asiaticus 5a2 1253 668 0.53 452637 Opitutus terrae PB90-1 4588 2673 0.58 452638 Polynucleobacter necessarius subsp. necessarius STIR1 1507 979 0.65 452659 Rickettsia rickettsii str. Iowa 1384 655 0.47 452662 Sphingobium japonicum UT26S 4347 2494 0.57 452863 Arthrobacter chlorophenolicus A6 4587 2677 0.58 453115 European bat lyssavirus 1 strain RV9 5 3 0.60 453116 European bat lyssavirus 2 strain RV1333 5 3 0.60 453457 Hirame rhabdovirus Korea/CA 9703/1997 6 2 0.33 453591 Ignicoccus hospitalis KIN4/I 1434 781 0.54 454166 Salmonella enterica subsp. enterica serovar Agona str. SL483 4592 2763 0.60 454169 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 4757 2833 0.60 455434 Treponema pallidum subsp. pallidum SS14 1028 601 0.58 455488 Anaeromyxobacter dehalogenans 2CP-1 4460 2664 0.60 455632 Streptomyces griseus subsp. griseus NBRC 13350 7008 4230 0.60 455880 Influenza A virus (A/Texas/UR06-0195/2007(H1N1)) 11 9 0.82 456320 Methanococcus voltae A3 1658 1010 0.61 456442 Methanoregula boonei 6A8 2450 1460 0.60 456481 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 3730 2035 0.55 457570 Natranaerobius thermophilus JW/NM-WN-LF 2847 1741 0.61 458233 Macrococcus caseolyticus JCSC5402 2059 1335 0.65 458234 Francisella tularensis subsp. holarctica FTNF002-00 1515 1005 0.66 458817 Shewanella halifaxensis HAW-EB4 4276 2655 0.62 460265 Methylobacterium nodulans ORS 2060 8130 4094 0.50 465515 Micrococcus luteus NCTC 2665 2207 1476 0.67 469008 Escherichia coli BL21(DE3) 4848 3250 0.67 469371 Thermobispora bispora DSM 43833 3545 2276 0.64 469382 Halogeometricum borinquense DSM 11551 3894 2029 0.52 469383 Conexibacter woesei DSM 14684 5912 3834 0.65 470137 Brucella suis ATCC 23445 3226 1888 0.59 470422 Human hepatitis A virus Hu/Germany/GBM/1976 1 1 1.00 470423 Human hepatitis A virus Hu/China/H2/1982 1 1 1.00 470424 Human hepatitis A virus Hu/Arizona/HAS-15/1979 1 1 1.00 470591 Human hepatitis A virus Hu/France/CF-53/1979 1 1 1.00 470592 Human hepatitis A virus Hu/Sierra Leone/SLF88/1988 1 1 1.00 470593 Human hepatitis A virus Hu/Norway/NOR-21/1998 1 1 1.00 471223 Geobacillus sp. WCH70 3048 1812 0.59 471472 Chlamydia trachomatis 434/Bu 887 558 0.63 471473 Chlamydia trachomatis L2b/UCH-1/proctitis 883 558 0.63 471821 uncultured Termite group 1 bacterium phylotype Rs-D17 767 585 0.76 471852 Thermomonospora curvata DSM 43183 4888 2871 0.59 471853 Beutenbergia cavernae DSM 12333 4195 2757 0.66 471854 Dyadobacter fermentans DSM 18053 5703 3178 0.56 471855 Slackia heliotrinireducens DSM 20476 2750 1665 0.61 471856 Jonesia denitrificans DSM 20603 2495 1535 0.62 471857 Saccharomonospora viridis DSM 43017 3828 2405 0.63 471876 Streptococcus pyogenes NZ131 1700 1118 0.66 472759 Nitrosococcus halophilus Nc4 3770 2156 0.57 474186 Enterococcus faecalis OG1RF 2583 1668 0.65 474341 Human hepatitis A virus Hu/Japan/HAJ85-1/1985 1 1 1.00 475494 Influenza A virus (A/equine/Lexington/1/1966(H7N7)) 11 10 0.91 475778 Avian encephalomyelitis virus strain Calnek 1 1 1.00 475779 Avian encephalomyelitis virus strain Van Reokel 1 1 1.00 475780 Avian encephalomyelitis virus strain L2Z 1 1 1.00 476213 Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 4601 2697 0.59 477974 Candidatus Desulforudis audaxviator MP104C 2136 1321 0.62 478009 Halobacterium salinarum R1 2615 1390 0.53 478434 Mycobacterium tuberculosis KZN 1435 4024 2269 0.56 478555 Beet yellows virus isolate Ukraine 8 3 0.38 478801 Kytococcus sedentarius DSM 20547 2531 1575 0.62 479431 Nakamurella multipartita DSM 44233 5123 3060 0.60 479432 Streptosporangium roseum DSM 43021 8955 5412 0.60 479433 Catenulispora acidiphila DSM 44928 8912 5225 0.59 479434 Sphaerobacter thermophilus DSM 20745 3471 2223 0.64 479435 Kribbella flavida DSM 17836 6940 4312 0.62 479436 Veillonella parvula DSM 2008 1843 1214 0.66 480116 Hepatitis B virus adw2/Rutter/1979 5 3 0.60 480119 Acinetobacter baumannii AB0057 3732 2199 0.59 480224 Chloroflexus sp. Y-400-fl 4153 2469 0.59 481448 Methylacidiphilum infernorum V4 2498 1330 0.53 481743 Paenibacillus sp. Y412MC10 6237 3976 0.64 481805 Escherichia coli ATCC 8739 4173 2845 0.68 481877 Enterocytozoon bieneusi H348 3311 1378 0.42 482133 Hepatitis B virus adr/Japan/Nishioka/1983 9 5 0.56 482134 Hepatitis B virus adw/Japan/Nishioka/1983 5 3 0.60 482235 Candidatus Phytoplasma mali AT 447 301 0.67 482561 Paracoccidioides brasiliensis Pb03 7872 3618 0.46 482820 Lake Victoria marburgvirus - Ozolin 7 4 0.57 483179 Brucella canis ATCC 23365 3238 1930 0.60 483219 Myxococcus fulvus HW-1 7262 3769 0.52 484019 Thermosipho africanus TCF52B 1918 1248 0.65 484022 Francisella philomiragia subsp. philomiragia ATCC 25017 1881 1231 0.65 485914 Halomicrobium mukohataei DSM 12286 3343 1721 0.51 485917 Pedobacter heparinus DSM 2366 4249 2493 0.59 485918 Chitinophaga pinensis DSM 2588 7179 3871 0.54 486041 Laccaria bicolor S238N-H82 17895 4978 0.28 486275 Torque teno virus Human/Japan/TRM1/1999 4 0 0.00 486276 Torque teno virus Human/Germany/KAV/2001 3 0 0.00 486277 Torque teno virus Human/Japan/SANBAN/1999 2 0 0.00 486278 Torque teno virus Human/China/CT23F/2001 4 0 0.00 486279 Torque teno virus Human/China/CT39F/2001 4 0 0.00 486280 Torque teno virus VT416 3 0 0.00 486281 Torque teno virus Chimpanzee/Japan/Pt-TTV6/2000 2 0 0.00 486282 Torque teno virus Japanese macaque/Japan/Mf-TTV9/2000 3 0 0.00 486410 Streptococcus dysgalactiae subsp. equisimilis GGS_124 2090 1397 0.67 486492 Chicken anemia virus Australia/CAU269-7/2000 3 2 0.67 487067 Torque teno virus Human/Ghana/GH1/1996 3 0 0.00 487099 Uukuniemi virus S23 4 2 0.50 487213 Streptococcus pneumoniae Taiwan19F-14 2034 1275 0.63 487214 Streptococcus pneumoniae Hungary19A-6 2152 1322 0.61 488221 Streptococcus pneumoniae 70585 2178 1338 0.61 488222 Streptococcus pneumoniae JJA 2120 1306 0.62 488223 Streptococcus pneumoniae P1031 2068 1274 0.62 488241 Influenza A virus (A/Korea/426/1968(H2N2)) 23 20 0.87 489449 Hepatitis B virus adw2/Southern-Africa/Cai 1 0 0.00 489454 Hepatitis B virus genotype A1 subtype adw2 (Isolate South Africa/84/2001) 5 3 0.60 489457 Hepatitis B virus genotype A2 (Isolate Japan/11D11HCCW/1998) 5 3 0.60 489458 Hepatitis B virus genotype A3 (Isolate Cameroon/CMR983/1994) 5 3 0.60 489459 Hepatitis B virus genotype A3 (Isolate Cameroon/CMR711/1994) 5 3 0.60 489461 Hepatitis B virus Vietnam/9873/1997 5 3 0.60 489462 Hepatitis B virus Vietnam/16091/1992 6 3 0.50 489463 Hepatitis B virus adw/China/patient4/1996 5 3 0.60 489464 Hepatitis B virus Japan/Yamagata-2/1998 5 3 0.60 489465 Hepatitis B virus Japan/Ry30/2002 5 3 0.60 489467 Hepatitis B virus ar/Japan/S-207/1988 5 3 0.60 489468 Hepatitis B virus ad/Japan/S-179/1988 4 2 0.50 489469 Hepatitis B virus ayw/China/Tibet127/2002 5 3 0.60 489470 Hepatitis B virus adr/Japan/A4/1994 4 2 0.50 489471 Hepatitis B virus ayw/Australia/AustRC/1992 5 3 0.60 489472 Hepatitis B virus Vietnam/3270/2000 5 3 0.60 489487 Hepatitis B virus ayw/Japan/JYW796/1988 5 3 0.60 489488 Hepatitis B virus ayw/Australia/AustKW/1991 5 3 0.60 489489 Hepatitis B virus ayw/Italy/CI/1992 5 3 0.60 489490 Hepatitis B virus Germany/1-91/1991 6 3 0.50 489495 Hepatitis B virus ayw4/Kou 4 2 0.50 489496 Hepatitis B virus Cote d'Ivoire/ABI-129/2003 4 2 0.50 489497 Hepatitis B virus Chimpanzee/Ch195/1999 4 2 0.50 489498 Hepatitis B virus Cote d'Ivoire/ABI-212/2003 4 2 0.50 489499 Hepatitis B virus adw4/El Salvador/1116Sal/1997 4 2 0.50 489500 Hepatitis B virus Argentina/sa11/2000 5 3 0.60 489501 Hepatitis B virus Argentina/sa16/2000 5 3 0.60 489503 Hepatitis B virus adw4q/Senegal/9203 5 3 0.60 489537 Hepatitis B virus United states/USG17/2002 4 2 0.50 489538 Hepatitis B virus IG29227/2000 4 2 0.50 489539 Hepatitis B virus United States/LAS2523/2002 4 2 0.50 489540 Hepatitis B virus adw4/Nicaragua/1853Nic/1997 4 2 0.50 489541 Hepatitis B virus adw4/Nicaragua/2928Nic/1997 5 3 0.60 489542 Hepatitis B virus duck/DHBV-3 4 3 0.75 489543 Hepatitis B virus duck/DHBV-16 5 3 0.60 489544 Hepatitis B virus ayw3q/gibbon/Hope 5 3 0.60 489545 Hepatitis B virus Orangutan/Somad 4 2 0.50 489546 Hepatitis B virus gorilla/Cameroon/gor97 5 3 0.60 489653 Neisseria lactamica 020-06 1961 1175 0.60 490133 Hepatitis B virus ayw/France/Tiollais/1979 7 3 0.43 490134 Hepatitis B virus Woolly monkey/Louisville 5 3 0.60 490899 Desulfurococcus kamchatkensis 1221n 1470 834 0.57 491077 Lactobacillus reuteri SD2112 2201 1403 0.64 491915 Anoxybacillus flavithermus WK1 2819 1770 0.63 491916 Rhizobium etli CIAT 652 6051 3703 0.61 491952 Marinomonas posidonica IVIA-Po-181 3489 2388 0.68 492094 Petunia vein clearing virus isolate Shepherd 1 1 1.00 492095 Petunia vein clearing virus isolate Hohn 1 1 1.00 498211 Cellvibrio japonicus Ueda107 3711 2223 0.60 498213 Clostridium botulinum B1 str. Okra 3844 2258 0.59 498214 Clostridium botulinum A3 str. Loch Maree 3981 2304 0.58 498217 Edwardsiella tarda EIB202 3568 2178 0.61 498761 Heliobacterium modesticaldum Ice1 2922 1623 0.56 499177 Clostridium sticklandii DSM 519 2572 1685 0.66 499556 Chapare virus 4 3 0.75 500485 Penicillium chrysogenum Wisconsin 54-1255 12773 5742 0.45 500578 Bean common mosaic necrosis virus NL-3 2 1 0.50 502025 Haliangium ochraceum DSM 14365 6684 3624 0.54 502779 Paracoccidioides brasiliensis Pb01 9116 3672 0.40 502780 Paracoccidioides brasiliensis Pb18 8750 3684 0.42 502800 Yersinia pseudotuberculosis YPIII 4171 2441 0.59 502801 Yersinia pseudotuberculosis PB1/+ 4213 2476 0.59 504474 Corynebacterium urealyticum DSM 7109 2011 1256 0.62 504832 Oligotropha carboxidovorans OM5 4643 2518 0.54 505682 Ureaplasma parvum serovar 3 str. ATCC 27815 609 374 0.61 506350 Influenza A virus (A/Hong Kong/1/1968(H3N2)) 29 25 0.86 507522 Klebsiella pneumoniae 342 5738 3595 0.63 508765 Clostridium botulinum B str. Eklund 17B 3473 1988 0.57 508767 Clostridium botulinum E3 str. Alaska E43 3254 1969 0.61 509169 Xanthomonas campestris pv. campestris str. B100 4410 2589 0.59 509170 Acinetobacter baumannii SDF 2767 1673 0.60 509173 Acinetobacter baumannii AYE 3652 2206 0.60 509190 Caulobacter segnis ATCC 21756 4136 2628 0.64 509615 Hepatitis E virus US2 3 2 0.67 509627 Hepatitis E virus Ct1 3 2 0.67 510516 Aspergillus oryzae RIB40 12059 6239 0.52 511437 Lactobacillus buchneri NRRL B-30929 2361 1433 0.61 511691 Streptococcus mutans NN2025 1892 1248 0.66 511995 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 847 630 0.74 512345 Hepatitis E virus swine/g3/United States/swUS1 3 2 0.67 512346 Hepatitis E virus human/g1/India/Hyderabad 3 2 0.67 512562 Helicobacter pylori Shi470 1564 896 0.57 512566 Streptococcus pneumoniae G54 2106 1313 0.62 515618 Candidatus Riesia pediculicola USDA 540 418 0.77 515619 Eubacterium rectale ATCC 33656 3546 1825 0.51 515620 Eubacterium eligens ATCC 27750 2763 1590 0.58 515621 Clostridium botulinum Ba4 str. 657 3977 2226 0.56 515635 Dictyoglomus turgidum DSM 6724 1743 1228 0.70 515849 Podospora anserina S mat+ 10628 4883 0.46 516950 Streptococcus pneumoniae CGSP14 2193 1327 0.61 516993 Avian hepatitis E virus chicken/United States/Meng 3 2 0.67 517417 Chlorobaculum parvum NCIB 8327 2044 1343 0.66 517418 Chloroherpeton thalassium ATCC 35110 2708 1675 0.62 518766 Rhodothermus marinus DSM 4252 2861 1789 0.63 518998 Influenza A virus (A/Nymc X-163(Nymc X-157-St. Petersburg/8/2006)(H1N1)) 11 9 0.82 519441 Streptobacillus moniliformis DSM 12112 1431 866 0.61 519442 Halorhabdus utahensis DSM 12940 3001 1576 0.53 521006 Neisseria gonorrhoeae NCCP11945 2595 1231 0.47 521007 Borrelia burgdorferi N40 1236 561 0.45 521008 Borrelia burgdorferi JD1 1360 566 0.42 521010 Borrelia bissettii DN127 1403 570 0.41 521011 Methanosphaerula palustris E1-9c 2655 1559 0.59 521045 Kosmotoga olearia TBF 19.5.1 2100 1400 0.67 521095 Atopobium parvulum DSM 20469 1353 926 0.68 521096 Tsukamurella paurometabola DSM 20162 4170 2568 0.62 521097 Capnocytophaga ochracea DSM 7271 2172 1184 0.55 521098 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 3059 1820 0.59 521460 Caldicellulosiruptor bescii DSM 6725 2652 1512 0.57 522373 Stenotrophomonas maltophilia K279a 4369 2500 0.57 522772 Denitrovibrio acetiphilus DSM 12809 2901 1920 0.66 523791 Kangiella koreensis DSM 16069 2630 1622 0.62 523794 Leptotrichia buccalis C-1013-b 2218 1284 0.58 523796 Staphylococcus aureus subsp. aureus ST398 2673 1655 0.62 523846 Methanothermus fervidus DSM 2088 1283 884 0.69 523850 Thermococcus onnurineus NA1 1978 1196 0.60 524364 Norovirus Hu/1968/US 3 1 0.33 525146 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2345 1502 0.64 525897 Desulfomicrobium baculatum DSM 4028 3423 2224 0.65 525898 Sulfurospirillum deleyianum DSM 6946 2243 1462 0.65 525903 Thermanaerovibrio acidaminovorans DSM 6589 1737 1252 0.72 525904 Thermobaculum terrenum ATCC BAA-798 2827 1871 0.66 525909 Acidimicrobium ferrooxidans DSM 10331 1936 1298 0.67 526218 Sebaldella termitidis ATCC 33386 4124 2143 0.52 526221 Verticillium albo-atrum VaMs.102 10233 4951 0.48 526222 Desulfovibrio salexigens DSM 2638 3809 2415 0.63 526225 Geodermatophilus obscurus DSM 43160 4795 2833 0.59 526226 Gordonia bronchialis DSM 43247 4630 2756 0.60 529507 Proteus mirabilis HI4320 3661 2225 0.61 530564 Pirellula staleyi DSM 6068 4711 2328 0.49 531844 Flavobacteriaceae bacterium 3519-10 2533 1419 0.56 535289 Acidovorax ebreus TPSY 3461 2218 0.64 535722 Arthroderma gypseum CBS 118893 8907 4213 0.47 536056 Escherichia coli DH1 4593 3090 0.67 536232 Clostridium botulinum A2 str. Kyoto 3860 2241 0.58 537021 Candidatus Liberibacter asiaticus str. psy62 1102 699 0.63 537457 Actinobacillus pleuropneumoniae serovar 7 str. AP76 2114 1474 0.70 543526 Haloterrigena turkmenica DSM 5511 5116 2605 0.51 543728 Variovorax paradoxus S110 6272 3994 0.64 543734 Lactobacillus casei BL23 3000 1785 0.59 543939 Sputnik virophage 21 3 0.14 544404 Escherichia coli O157:H7 str. TW14359 5255 3051 0.58 544556 Geobacillus sp. Y412MC61 3414 2092 0.61 544711 Ajellomyces capsulatus H88 9446 3987 0.42 544712 Ajellomyces capsulatus H143 9545 3894 0.41 545124 Saccharomyces cerevisiae AWRI1631 5450 2671 0.49 545693 Bacillus megaterium QM B1551 5606 3219 0.57 546272 Brucella melitensis ATCC 23457 3125 1901 0.61 546342 Staphylococcus aureus subsp. aureus str. JKD6008 2652 1642 0.62 546414 Deinococcus deserti VCD115 3452 2165 0.63 547558 Methanohalophilus mahii DSM 5219 1986 1264 0.64 547559 Natrialba magadii ATCC 43099 4213 2066 0.49 548473 Staphylococcus aureus subsp. aureus TCH60 2693 1688 0.63 548476 Corynebacterium aurimucosum ATCC 700975 2509 1545 0.62 550537 Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 4198 2756 0.66 550538 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 3953 2606 0.66 550540 Ferrimonas balearica DSM 9799 3781 2327 0.62 552526 Streptococcus equi subsp. zooepidemicus MGCS10565 1861 1151 0.62 552531 Bifidobacterium animalis subsp. lactis BB-12 1641 1050 0.64 552536 Listeria monocytogenes HCC23 2972 1834 0.62 552811 Dehalogenimonas lykanthroporepellens BL-DC-9 1619 1032 0.64 553199 Propionibacterium acnes SK137 2347 1471 0.63 553480 Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 4393 2362 0.54 553482 Streptococcus equi subsp. equi 4047 1916 1198 0.63 553483 Steptococcus equi subsp. zooepidemicus H70 1851 1198 0.65 554155 Arthroderma otae CBS 113480 8764 4291 0.49 554290 Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 4275 2662 0.62 554373 Moniliophthora perniciosa FA553 13649 4513 0.33 555079 Thermosediminibacter oceani DSM 16646 2151 1382 0.64 555217 Zymomonas mobilis subsp. mobilis ATCC 10988 1777 1200 0.68 555311 Sulfolobus solfataricus 98/2 2661 1437 0.54 555778 Halothiobacillus neapolitanus c2 2353 1500 0.64 555970 Bifidobacterium animalis subsp. lactis DSM 10140 1565 1029 0.66 556484 Phaeodactylum tricornutum CCAP 1055/1 10465 4777 0.46 557433 Lactobacillus reuteri JCM 1112 1792 1177 0.66 557436 Lactobacillus reuteri DSM 20016 1872 1208 0.65 557598 Laribacter hongkongensis HLHK9 3208 1854 0.58 557600 Acinetobacter baumannii AB307-0294 3452 2101 0.61 557722 Pseudomonas aeruginosa LESB58 5908 3665 0.62 557723 Haemophilus parasuis SH0165 2002 1325 0.66 557760 Rhodobacter sphaeroides KD131 4542 2758 0.61 559292 Saccharomyces cerevisiae S288c 6627 5777 0.87 559295 Lachancea thermotolerans CBS 6340 5093 2790 0.55 559297 Ajellomyces dermatitidis ER-3 9539 4117 0.43 559298 Ajellomyces dermatitidis SLH14081 9587 4134 0.43 559307 Zygosaccharomyces rouxii CBS 732 4987 2731 0.55 561007 Mycobacterium abscessus ATCC 19977 4945 2860 0.58 561229 Dickeya zeae Ech1591 4138 2760 0.67 561230 Pectobacterium carotovorum subsp. carotovorum PC1 4245 2800 0.66 561231 Pectobacterium wasabiae WPP163 4435 2763 0.62 561275 Mycobacterium bovis BCG str. Tokyo 172 3906 2253 0.58 561276 Streptococcus pneumoniae ATCC 700669 1985 1308 0.66 561304 Mycobacterium leprae Br4923 1599 1020 0.64 561443 African swine fever virus tick/South Africa/Pretoriuskop Pr4/1996 159 45 0.28 561444 African swine fever virus warthog/Namibia/Wart80/1980 160 47 0.29 561445 African swine fever virus pig/Kenya/KEN-50/1950 160 46 0.29 561501 Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) 553 486 0.88 561896 Postia placenta Mad-698-R 8983 2978 0.33 562019 Rickettsia peacockii str. Rustic 927 597 0.64 562970 Kyrpidia tusciae DSM 2912 3135 1968 0.63 563041 Helicobacter pylori G27 1501 897 0.60 563178 Buchnera aphidicola str. 5A (Acyrthosiphon pisum) 555 488 0.88 565034 Brachyspira hyodysenteriae WA1 2652 1494 0.56 565042 Bifidobacterium longum subsp. longum JCM 1217 1908 1171 0.61 565050 Caulobacter crescentus NA1000 3853 2381 0.62 565575 Ureaplasma urealyticum serovar 10 str. ATCC 33699 646 378 0.59 566546 Escherichia coli W 4925 3058 0.62 568206 Bacillus anthracis str. CDC 684 5895 3019 0.51 568703 Lactobacillus rhamnosus GG 3239 1854 0.57 568704 Lactobacillus rhamnosus Lc 705 2952 1755 0.59 568708 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 4546 2857 0.63 568813 Streptococcus suis SC84 1887 1260 0.67 568814 Streptococcus suis BM407 1922 1278 0.66 568819 Listeria monocytogenes serotype 4b str. CLIP 80459 2765 1803 0.65 570417 Wolbachia endosymbiont of Culex quinquefasciatus Pel 1161 618 0.53 570508 Helicobacter pylori P12 1572 915 0.58 572263 Mycoplasma conjunctivae HRC/581 695 395 0.57 572264 Bacillus cereus 03BB102 5598 2925 0.52 572265 Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) 2045 1017 0.50 572477 Allochromatium vinosum DSM 180 3223 2032 0.63 572478 Vulcanisaeta distributa DSM 14429 2493 1280 0.51 572480 Arcobacter nitrofigilis DSM 7299 3125 1948 0.62 572544 Ilyobacter polytropus DSM 2926 2859 1867 0.65 572546 Archaeoglobus profundus DSM 5631 1824 1006 0.55 572547 Aminobacterium colombiense DSM 12261 1872 1256 0.67 573061 Clostridium cellulovorans 743B 4211 2520 0.60 573063 Methanocaldococcus infernus ME 1440 964 0.67 573064 Methanocaldococcus fervens AG86 1581 991 0.63 573235 Escherichia coli O26:H11 str. 11368 5326 3084 0.58 573370 Desulfovibrio magneticus RS-1 4663 2630 0.56 573413 Spirochaeta smaragdinae DSM 11293 4212 2813 0.67 573569 Francisella sp. TX077308 1976 1245 0.63 573826 Candida dubliniensis CD36 5828 3349 0.57 574087 Acetohalobium arabaticum DSM 5501 2276 1502 0.66 574521 Escherichia coli O127:H6 str. E2348/69 4594 2875 0.63 574961 Saccharomyces cerevisiae JAY291 5193 2824 0.54 575788 Vibrio splendidus LGP32 4420 2669 0.60 578458 Schizophyllum commune H4-8 13128 5231 0.40 578460 Nosema ceranae BRL01 2060 828 0.40 578827 Human rotavirus A64 G10P11 12 9 0.75 578828 Rotavirus A cow/USA/WC3/1981 G6P7[5] 12 9 0.75 578829 Rotavirus A human/JPN/KUN/1980 G2P1B[4] 3 2 0.67 578830 Rotavirus A Hu/WI61/1983/G9P1A[8] 12 9 0.75 578831 Rotavirus A human/USA/D/1974 G1P1A[8] 12 9 0.75 578832 Rotavirus A human/JPN/YO/1977 G3P1A[8] 7 5 0.71 578834 Rotavirus A human/USA/M/1976 G3 4 3 0.75 578843 Rotavirus A human/BEL/4106/2000 G3P11[14] 12 9 0.75 579112 Vibrio cholerae M66-2 3652 2245 0.61 579137 Methanocaldococcus vulcanius M7 1740 1033 0.59 579138 Zymomonas mobilis subsp. pomaceae ATCC 29192 1740 1168 0.67 579405 Dickeya dadantii Ech703 3967 2786 0.70 580049 Chlamydia trachomatis B/Jali20/OT 883 560 0.63 580050 Bifidobacterium animalis subsp. lactis Bl-04 1566 1031 0.66 580327 Thermoanaerobacterium thermosaccharolyticum DSM 571 2583 1599 0.62 582402 Hirschia baltica ATCC 49814 3187 1974 0.62 582744 Methylovorus glucosetrophus SIP3-4 2907 1783 0.61 583345 Methylotenera mobilis JLW8 2334 1564 0.67 583346 Clostridium kluyveri NBRC 12016 3496 2108 0.60 583356 Ignisphaera aggregans DSM 17230 1929 1003 0.52 585034 Escherichia coli IAI1 4330 2835 0.65 585035 Escherichia coli S88 4805 3009 0.63 585054 Escherichia fergusonii ATCC 35469 4311 2777 0.64 585055 Escherichia coli 55989 4797 2981 0.62 585056 Escherichia coli UMN026 4975 3082 0.62 585057 Escherichia coli IAI39 4554 2954 0.65 585395 Escherichia coli O103:H2 str. 12009 4964 2999 0.60 585396 Escherichia coli O111:H- str. 11128 5238 3033 0.58 585397 Escherichia coli ED1a 4940 2981 0.60 587200 Variola virus human/India/Ind3/1967 199 70 0.35 588858 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 5369 2888 0.54 589924 Ferroglobus placidus DSM 10642 2463 1393 0.57 590409 Dickeya dadantii Ech586 4148 2811 0.68 590998 Cellulomonas fimi ATCC 484 3761 2361 0.63 591001 Acidaminococcus fermentans DSM 20731 2016 1335 0.66 591020 Shigella flexneri 2002017 4456 2746 0.62 592021 Bacillus anthracis str. A0248 5291 2758 0.52 592022 Bacillus megaterium DSM 319 5100 3033 0.59 592205 Helicobacter pylori B38 1369 897 0.66 592316 Pantoea sp. At-9b 5760 3809 0.66 593117 Thermococcus gammatolerans EJ3 2159 1251 0.58 593588 Vibrio cholerae MJ-1236 3695 2353 0.64 595494 Tolumonas auensis DSM 9187 3126 2118 0.68 595495 Escherichia coli KO11FL 4637 2889 0.62 595496 Escherichia coli BW2952 4042 2775 0.69 595499 Candidatus Sulcia muelleri SMDSEM 242 214 0.88 595537 Variovorax paradoxus EPS 5937 3687 0.62 598659 Nautilia profundicola AmH 1730 1122 0.65 598745 Giardia intestinalis ATCC 50581 4466 1681 0.38 600809 Blattabacterium sp. (Periplaneta americana) str. BPLAN 581 485 0.83 604354 Thermococcus sibiricus MM 739 2037 1203 0.59 608538 Hydrogenobacter thermophilus TK-6 2039 1273 0.62 610130 Clostridium saccharolyticum WM1 4133 2599 0.63 622759 Zymomonas mobilis subsp. mobilis NCIMB 11163 1885 1227 0.65 632772 Rhodococcus opacus B4 8170 5009 0.61 633147 Olsenella uli DSM 7084 1739 1179 0.68 633148 Thermosphaera aggregans DSM 11486 1387 808 0.58 634176 Aggregatibacter aphrophilus NJ8700 2246 1402 0.62 634452 Acetobacter pasteurianus IFO 3283-01 2906 1784 0.61 634464 Chlamydia trachomatis Sweden2 882 557 0.63 634498 Methanobrevibacter ruminantium M1 2209 1251 0.57 634499 Erwinia pyrifoliae Ep1/96 3619 2186 0.60 634500 Erwinia billingiae Eb661 4915 3157 0.64 634503 Edwardsiella ictaluri 93-146 3725 2147 0.58 634504 Bartonella grahamii as4aup 1709 1012 0.59 637381 Listeria monocytogenes 08-5923 2961 1837 0.62 637382 Yersinia pestis D106004 3642 2389 0.66 637385 Yersinia pestis D182038 3632 2386 0.66 637386 Yersinia pestis Z176003 3546 2307 0.65 637905 Shewanella violacea DSS12 4336 2358 0.54 637909 Streptococcus gallolyticus UCN34 2216 1448 0.65 637910 Citrobacter rodentium ICC168 4792 2922 0.61 638303 Thermocrinis albus DSM 14484 1592 1069 0.67 639283 Starkeya novella DSM 506 4424 2830 0.64 640131 Klebsiella variicola At-22 5056 3497 0.69 640132 Segniliparus rotundus DSM 44985 3001 1606 0.54 640511 Burkholderia sp. CCGE1002 6866 4266 0.62 641892 Candidatus Sulcia muelleri DMIN 226 200 0.88 643680 Saccharomyces cerevisiae EC1118 5983 2928 0.49 644042 Lactobacillus plantarum JDM1 2948 1856 0.63 644223 Komagataella pastoris GS115 5072 2848 0.56 644281 Methanocaldococcus sp. FS406-22 1815 1076 0.59 644282 Desulfarculus baarsii DSM 2075 3270 2111 0.65 644284 Arcanobacterium haemolyticum DSM 20595 1720 1077 0.63 644295 Methanohalobium evestigatum Z-7303 2250 1290 0.57 644440 Infectious bursal disease virus chicken/UK/UK661/1989 3 2 0.67 644639 Duck hepatitis B virus isolate DHBVQCA34 4 3 0.75 644651 Erwinia pyrifoliae DSM 12163 3946 2263 0.57 645098 Measles virus strain Ichinose-B95a 8 6 0.75 645099 Banana bunchy top virus isolate Autralia 7 1 0.14 645118 Infectious bursal disease virus chicken/Cuba/Soroa/1998 3 2 0.67 645127 Corynebacterium kroppenstedtii DSM 44385 2018 1281 0.63 645133 Glomerella graminicola M1.001 12019 5678 0.47 645462 Clostridium difficile CD196 3453 2273 0.66 645463 Clostridium difficile R20291 3505 2302 0.66 647113 Methanothermococcus okinawensis IH1 1583 1004 0.63 647331 Atkinsonella hypoxylon virus isolate 2H 2 1 0.50 647332 Human picobirnavirus strain Hy005102 3 1 0.33 648168 Colorado tick fever virus Florio N-7180 13 2 0.15 648169 Lymantria dispar cypovirus 1 isolate Rao 10 2 0.20 648170 Aedes pseudoscutellaris reovirus isolate France 9 2 0.22 648172 Fiji disease virus isolate Sugarcane 12 1 0.08 648234 American grass carp reovirus PB01-155 12 7 0.58 648235 Murine minute virus strain MVM prototype 7 3 0.43 648238 Human parvovirus B19 isolate AU 4 2 0.50 648242 Adeno-associated virus 2 Srivastava/1982 5 2 0.40 648243 Bovine parvovirus pAT153/1986 3 2 0.67 648250 Junonia coenia densovirus pBRJ/1990 4 1 0.25 648330 Aedes albopictus densovirus Boublik/1994 3 1 0.33 648757 Rhodomicrobium vannielii ATCC 17100 3513 2103 0.60 649596 Micromonas pusilla reovirus (isolate Netherlands) 11 1 0.09 649603 Rice ragged stunt virus (isolate Thailand) 11 4 0.36 649604 Banna virus strain JKT-6423 12 3 0.25 649639 Bacillus cellulosilyticus DSM 2522 4253 2395 0.56 649893 Giardia lamblia virus isolate Wang 2 1 0.50 649895 Broad bean wilt virus 1 ATCC PV132 2 2 1.00 650130 Human rhinovirus 89 ATCC VR-1199 1 1 1.00 650137 Cherry rasp leaf virus isolate potato 2 1 0.50 650150 Erysipelothrix rhusiopathiae str. Fujisawa 1679 1074 0.64 650481 Satsuma dwarf virus S-58 2 1 0.50 650482 Mushroom bacilliform virus LF-1/AUS 4 2 0.50 650488 Pelargonium zonate spot virus isolate tomato 4 3 0.75 650489 Olive latent virus 2 isolate Italy 4 3 0.75 651354 Grapevine leafroll-associated virus 3 isolate NY1 13 3 0.23 651355 Lettuce infectious yellows virus isolate 92 9 4 0.44 651356 Apple stem pitting virus PA66 5 3 0.60 651357 Indian citrus ringspot virus K1 6 3 0.50 651358 Grapevine virus A isolate Is 151 5 2 0.40 652104 Barley yellow mosaic virus isolate Yancheng 2 2 1.00 652105 Sweet potato mild mottle virus isolate Salazar 1 1 1.00 652106 Ryegrass mosaic virus isolate Danish 1 1 1.00 652108 Nudaurelia capensis beta virus isolate South Africa 2 1 0.50 652109 Pothos latent virus isolate pigeonpea 4 3 0.75 652110 Oat chlorotic stunt virus isolate United Kingdom 3 2 0.67 652111 Carnation mottle virus isolate Shanghai 4 3 0.75 652597 Carnation ringspot virus isolate Lommel 4 2 0.50 652599 Panicum mosaic virus strain Kansas 109S 5 2 0.40 652668 Grapevine fleck virus isolate MT48 4 2 0.50 652669 Maize rayado fino virus isolate Costa Rica 2 1 0.50 652670 Beet necrotic yellow vein virus S 9 3 0.33 652673 Soil-borne wheat mosaic virus strain Nebraska 5 3 0.60 652674 Hepatitis E virus isolate Hetian 3 2 0.67 652675 Raspberry bushy dwarf virus isolate R15 3 1 0.33 652837 Peanut clump virus 87/TGTA2 7 3 0.43 652838 Ourmia melon virus VE9 3 1 0.33 652839 Potato mop-top virus Sw 7 4 0.57 652938 Southern bean mosaic virus isolate Arkansas 4 3 0.75 652939 Tobacco rattle virus PpK20 6 3 0.50 652953 Newcastle disease virus B1/48 8 5 0.63 652954 Avian metapneumovirus 15a 9 4 0.44 652961 Crimean-Congo hemorrhagic fever virus strain IbAr10200 3 2 0.67 652962 Lettuce big-vein associated virus isolate Kagawa 6 2 0.33 652963 Citrus ringspot virus isolate P-121 4 2 0.50 652964 Mirafiori lettuce virus LS301-O 7 2 0.29 652965 Infectious salmon anemia virus isolate 810/9/99 10 3 0.30 653733 Desulfurispirillum indicum S5 2551 1668 0.65 653938 Listeria monocytogenes 08-5578 3082 1867 0.61 654901 Alcelaphine herpesvirus 1 strain C500 70 24 0.34 654903 Ostreid herpesvirus 1 (isolate France) 116 18 0.16 654904 Rachiplusia ou MNPV (strain R1) 149 39 0.26 654905 Cydia pomonella granulosis virus (isolate Mexican) 143 38 0.27 654908 Sulfolobus islandicus filamentous virus (isolate Hveragerdi) 73 8 0.11 654909 Acidianus filamentous virus 1 (isolate Yellowstone) 40 6 0.15 654910 Acidianus filamentous virus 2 (isolate Pozzuoli) 52 4 0.08 654911 Acidianus bottle-shaped virus (isolate Pozzuoli) 54 3 0.06 654912 His1 virus (isolate Victoria) 35 3 0.09 654913 Shrimp white spot syndrome virus (isolate Tongan) 531 17 0.03 654915 Mastomys natalensis papillomavirus (isolate African multimammate rat) 6 6 1.00 654919 Microplitis demolitor bracovirus (isolate Webb) 53 13 0.25 654922 Lymphocystis disease virus 1 (isolate Darai) 1 1 1.00 654924 Frog virus 3 (isolate Goorha) 98 25 0.26 654929 Porcine circovirus 1 (isolate China) 2 2 1.00 654931 Drosophila x virus (isolate Chung) 3 2 0.67 654932 Penicillium chrysogenum virus (isolate Caston) 4 1 0.25 654934 White clover cryptic virus 1 (isolate Boccardo) 2 1 0.50 655816 Bacillus subtilis subsp. spizizenii str. W23 4057 2494 0.61 655827 Metarhizium acridum CQMa 102 9830 5213 0.53 655844 Metarhizium anisopliae ARSEF 23 10581 5723 0.54 655863 Grosmannia clavigera kw1407 8311 4502 0.54 656061 Tuber melanosporum Mel28 7494 3502 0.47 658858 Giardia lamblia P15 4998 1823 0.36 660122 Nectria haematococca mpVI 77-13-4 15680 7816 0.50 661367 Legionella longbeachae NSW150 3460 1806 0.52 661410 Methylobacterium extorquens DM4 5715 3060 0.54 663202 Trichophyton verrucosum HKI 0517 8028 3808 0.47 663331 Arthroderma benhamiae CBS 112371 7978 3801 0.48 663917 Geobacter sulfurreducens KN400 3313 2131 0.64 663951 Staphylococcus aureus subsp. aureus TW20 2764 1668 0.60 665029 Erwinia amylovora CFBP1430 3733 2182 0.58 665079 Sclerotinia sclerotiorum 1980 UF-70 14401 4930 0.34 665571 Spirochaeta thermophila DSM 6192 2199 1419 0.65 666510 Acidilobus saccharovorans 345-15 1499 901 0.60 668336 Aggregatibacter actinomycetemcomitans D11S-1 2211 1378 0.62 670426 Psittacid herpesvirus 1 Amazon parrot/1997 71 25 0.35 672161 Chlamydia trachomatis B/TZ1A828/OT 888 559 0.63 673322 Measles virus strain Shanghai-191 vaccine 1 1 1.00 679716 Trypanosoma brucei gambiense DAL972 9668 3103 0.32 679896 Corynebacterium pseudotuberculosis 1002 2090 1267 0.61 679901 Methanosalsum zhilinae DSM 4017 1972 1246 0.63 679926 Methanoplanus petrolearius DSM 11571 2779 1510 0.54 680198 Streptomyces scabiei 87.22 8700 5035 0.58 680646 Rothia mucilaginosa DY-18 1991 1205 0.61 681288 Staphylococcus aureus subsp. aureus ED98 2683 1602 0.60 681645 Corynebacterium pseudotuberculosis C231 2090 1264 0.60 683837 Listeria seeligeri serovar 1/2b str. SLCC3954 2710 1771 0.65 684364 Batrachochytrium dendrobatidis JAM81 8610 3749 0.44 684738 Lactococcus lactis subsp. lactis KF147 2458 1587 0.65 684950 Helicobacter pylori 52 1403 881 0.63 685038 Escherichia coli O83:H1 str. NRG 857C 4575 2961 0.65 685727 Rhodococcus equi 103S 4576 2907 0.64 686943 Poinsettia latent virus isolate Germany/Siepen 4 3 0.75 686945 Lolium latent virus USA/US1 6 3 0.50 686946 Botrytis virus F NZL/Howitt 2 1 0.50 686947 Botrytis virus X NZL/Howitt 5 2 0.40 686948 Tomato torrado virus ESP/PRIToTV0301 3 1 0.33 686949 Blackberry virus Y USA/C3ARK 1 1 1.00 686950 Citrus leprosis virus C BRA/Cordeiropolis 6 1 0.17 686981 Citrus leaf blotch virus FRA/SRA-153 3 3 1.00 686987 Sclerotinia sclerotiorum debilitation-associated virus CHN/Xie 1 1 1.00 692420 Bacillus amyloliquefaciens DSM 7 3902 2379 0.61 693216 Cronobacter turicensis z3032 4466 2735 0.61 693977 Deinococcus proteolyticus MRP 2652 1561 0.59 693979 Bacteroides helcogenes P 36-108 3241 1915 0.59 693989 Pea enation mosaic virus-1 strain WSG 5 4 0.80 694006 Rousettus bat coronavirus HKU9 9 3 0.33 694007 Tylonycteris bat coronavirus HKU4 18 12 0.67 694008 Pipistrellus bat coronavirus HKU5 18 12 0.67 694067 Human metapneumovirus CAN97-83 9 4 0.44 696863 Spring viraemia of carp virus 178 77 0.43 697329 Ruminococcus albus 7 3776 1888 0.50 698737 Staphylococcus lugdunensis HKU09-01 2456 1572 0.64 701177 Escherichia coli O55:H7 str. CB9615 5085 3003 0.59 701347 Enterobacter cloacae SCF1 4393 3007 0.68 703339 Staphylococcus aureus 04-02981 2639 1643 0.62 706191 Pantoea ananatis LMG 20103 4242 2732 0.64 710127 Mycoplasma gallisepticum str. R(low) 761 446 0.59 710128 Mycoplasma gallisepticum str. R(high) 763 443 0.58 710696 Intrasporangium calvum DSM 43043 3551 2285 0.64 712898 Pantoea vagans C9-1 4590 2908 0.63 712938 Lactobacillus fermentum CECT 5716 1043 788 0.76 712961 Lactobacillus salivarius CECT 5713 1533 1116 0.73 714962 Escherichia coli IHE3034 4748 2911 0.61 715451 Alteromonas sp. SN2 4343 2522 0.58 716540 Erwinia amylovora ATCC 49946 3563 2142 0.60 716541 Enterobacter cloacae subsp. cloacae ATCC 13047 5411 3212 0.59 717773 Thioalkalimicrobium cyclicum ALM1 1664 1151 0.69 717774 Marinomonas mediterranea MMB-1 4118 2589 0.63 718219 Chlamydia trachomatis G/9301 921 562 0.61 718251 Edwardsiella tarda FL6-60 3251 2199 0.68 720555 Bacillus atrophaeus 1942 4186 2462 0.59 721032 Saccharomyces cerevisiae Kyokai no. 7 5776 3106 0.54 722438 Mycoplasma pneumoniae FH 629 371 0.59 741091 Rahnella sp. Y9602 5099 3290 0.65 743525 Thermus scotoductus SA-01 2448 1547 0.63 743720 Pseudomonas fulva 12-X 4459 2910 0.65 746361 Lactococcus lactis subsp. cremoris NZ9000 2446 1481 0.61 748671 Lactobacillus crispatus ST1 2003 1274 0.64 749219 Moraxella catarrhalis RH4 1881 1124 0.60 749414 Streptomyces bingchenggensis BCW-1 10019 6061 0.60 749927 Amycolatopsis mediterranei U32 9204 5794 0.63 754252 Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 2310 1468 0.64 756982 Arthrobotrys oligospora ATCC 24927 11478 4545 0.40 757424 Herbaspirillum seropedicae SmR1 4732 3184 0.67 761659 Salinibacter ruber M8 3247 1789 0.55 762051 Leuconostoc kimchii IMSNU 11154 2128 1321 0.62 762376 Achromobacter xylosoxidans A8 6798 4590 0.68 762550 Leuconostoc gasicomitatum LMG 18811 1902 1211 0.64 764097 Saccharomyces cerevisiae AWRI796 3760 1955 0.52 764098 Saccharomyces cerevisiae Lalvin QA23 4008 2100 0.52 764099 Saccharomyces cerevisiae Vin13 3916 2043 0.52 764100 Saccharomyces cerevisiae VL3 4014 2113 0.53 764101 Saccharomyces cerevisiae FostersO 3560 1810 0.51 764102 Saccharomyces cerevisiae FostersB 3679 1893 0.51 765874 Corynebacterium pseudotuberculosis FRC41 2110 1313 0.62 766178 Ictalurid herpesvirus 1 (strain Auburn) 76 17 0.22 766180 White bream virus (strain DF24/00) 5 3 0.60 766182 Torque teno virus 1 (isolate TA278) 2 0 0.00 766183 Torque teno mini virus 1 (isolate TLMV-CBD279) 3 0 0.00 766184 Torque teno midi virus 1 (isolate MD1-073) 2 0 0.00 766185 Torque teno tupaia virus (isolate Tbc-TTV14) 3 0 0.00 766186 Torque teno tamarin virus (isolate So-TTV2) 4 0 0.00 766187 Torque teno douroucouli virus (isolate At-TTV3) 3 0 0.00 766188 Torque teno felis virus-Fc-TTV4 3 0 0.00 766189 Torque teno canis virus (isolate Cf-TTV10) 3 0 0.00 766190 Torque teno sus virus 1 (isolate Sd-TTV31) 3 0 0.00 766191 Cryptosporidium parvum virus 1 (strain KSU-1) 2 1 0.50 766192 Canine oral papillomavirus (strain Y62) 7 6 0.86 766194 Dugbe virus (isolate ArD44313) 3 2 0.67 768065 Haloquadratum walsbyi C23 2729 1436 0.53 768066 Halomonas elongata DSM 2581 3471 2415 0.70 768670 Calditerrivibrio nitroreducens DSM 19672 2089 1439 0.69 771870 Sordaria macrospora k-hell 9891 4388 0.44 795797 Halalkalicoccus jeotgali B3 3779 1913 0.51 796210 La Crosse virus L78 4 2 0.50 857087 Methylomonas methanica MC09 4435 2511 0.57 857306 PRRSV SD 01-08 8 3 0.38 861557 Pyrenophora teres f. teres 0-1 11705 4983 0.43 862908 Bacteriovorax marinus SJ 3229 1727 0.53 862962 Bacteroides fragilis 638R 4284 2332 0.54 862965 Haemophilus parainfluenzae T3T1 1973 1306 0.66 866775 Aerococcus urinae ACS-120-V-Col10a 1684 1164 0.69 868131 Methanobacterium sp. SWAN-1 2394 1351 0.56 868132 Methanobacterium sp. AL-21 2493 1425 0.57 868565 Human herpesvirus 8 strain GK18 86 33 0.38 871271 Candidatus Zinderia insecticola CARI 206 190 0.92 871575 Ogataea parapolymorpha DL-1 4171 2664 0.64 871585 Acinetobacter calcoaceticus PHEA-2 3598 2286 0.64 876142 Encephalitozoon intestinalis ATCC 50506 1829 956 0.52 880591 Ketogulonicigenium vulgare Y25 3209 2057 0.64 880724 Methanotorris igneus Kol 5 1753 1111 0.63 882210 Maize chlorotic mottle virus Kansas/1987 4 2 0.50 887061 Methylovorus sp. MP688 2709 1719 0.63 903503 Candidatus Moranella endobia PCIT 405 355 0.88 909420 Neisseria meningitidis H44/76 2946 1542 0.52 909946 Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 4826 2917 0.60 914672 Nodamura virus Mag115 3 3 1.00 926569 Anaerolinea thermophila UNI-1 3110 1872 0.60 926570 Acidiphilium multivorum AIU301 3858 2456 0.64 927666 Streptococcus oralis Uo5 1907 1182 0.62 928296 Borna disease virus strain V 5 2 0.40 928297 Bovine ephemeral fever virus strain BB7721 12 3 0.25 928299 Cowpea mosaic virus strain SB 5 4 0.80 928300 Cricket paralysis virus Teleogryllus commodus/Australia/CrPVVIC/1968 2 2 1.00 928301 Fowlpox virus strain NVSL 251 84 0.33 928302 Hepatitis B virus C/ayr human/Japan/Okamoto 5 4 0.80 928303 Hendra virus horse/Australia/Hendra/1994 9 5 0.56 928304 Lettuce necrotic yellows virus isolate 318 6 3 0.50 928305 Maize mosaic virus maize/USA/Reed/2005 6 3 0.50 928306 Moloney murine leukemia virus isolate Shinnick 3 3 1.00 928313 Tacaribe virus strain Franze-Fernandez 4 3 0.75 928314 Yaba monkey tumor virus strain VR587 140 47 0.34 930944 Yersinia enterocolitica subsp. palearctica Y11 4391 2719 0.62 932677 Pantoea ananatis AJ13355 4060 2790 0.69 936153 Enterococcus faecalis 62 3010 1779 0.59 936155 Helicobacter felis ATCC 49179 1649 991 0.60 936156 Bacillus subtilis BSn5 4145 2503 0.60 937773 Staphylococcus pseudintermedius HKU10-03 2449 1586 0.65 937774 Taylorella equigenitalis MCE9 1556 1019 0.65 940190 Melissococcus plutonius ATCC 35311 1876 1195 0.64 953739 Streptomyces venezuelae ATCC 10712 7451 4419 0.59 979556 Microbacterium testaceum StLB037 3671 2497 0.68 984892 Staphylococcus pseudintermedius ED99 2346 1562 0.67 985053 Vulcanisaeta moutnovskia 768-28 2318 1213 0.52 985895 Leptosphaeria maculans JN3 12468 4672 0.37 990316 Methanosaeta concilii GP6 2791 1474 0.53 994484 Pseudomonas brassicacearum subsp. brassicacearum NFM421 6081 3794 0.62 998820 Lactobacillus casei BD-II 3166 1753 0.55 999378 Lactobacillus casei LC2W 3119 1749 0.56 999809 Sporisorium reilianum SRZ2 6673 3516 0.53 999953 Trypanosoma brucei brucei strain 927/4 GUTat10.1 8774 3139 0.36 1002809 Solibacillus silvestris StLB046 3812 2391 0.63 1005059 Cocksfoot mottle virus Dactylis glomerata/Norway/CfMV-NO/1995 4 3 0.75 1005060 Groundnut rosette virus MC1 3 3 1.00 1016998 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 5559 2743 0.49 1017264 Bordetella pertussis CS 3274 2228 0.68 1028307 Enterobacter aerogenes KCTC 2190 4909 3204 0.65 1033837 Lactobacillus kefiranofaciens ZW3 2134 1223 0.57 1045854 Weissella koreensis KACC 15510 1346 890 0.66 1046629 Streptococcus salivarius 57.I 1933 1298 0.67 1048332 Streptococcus salivarius CCHSS3 1999 1333 0.67 1051072 Streptococcus equi subsp. zooepidemicus ATCC 35246 2063 1193 0.58 1064592 Naumovozyma castellii CBS 4309 5565 3011 0.54 1077587 Influenza B virus (B/Victoria/2/1987) 15 12 0.80 1111708 Synechocystis sp. PCC 6803 substr. Kazusa 3507 1898 0.54