NCBI Taxonomy id Scientific name No of proteins No of proteins with annotation % of proteins with annotation 139 Borrelia burgdorferi 4262 2311 0.54 197 Campylobacter jejuni 3936 1182 0.30 340 Xanthomonas campestris pv. campestris 4260 1322 0.31 375 Bradyrhizobium japonicum 8994 2336 0.26 394 Sinorhizobium fredii NGR234 6433 1906 0.30 491 Neisseria meningitidis serogroup B 2083 713 0.34 519 Bordetella parapertussis 4217 1450 0.34 520 Bordetella pertussis 3523 1300 0.37 536 Chromobacterium violaceum 4438 1518 0.34 542 Zymomonas mobilis 2024 719 0.36 623 Shigella flexneri 5431 1915 0.35 632 Yersinia pestis 6138 2028 0.33 633 Yersinia pseudotuberculosis 4521 1639 0.36 666 Vibrio cholerae 5899 1963 0.33 670 Vibrio parahaemolyticus 5741 1996 0.35 672 Vibrio vulnificus 5084 1774 0.35 777 Coxiella burnetii 2117 579 0.27 813 Chlamydia trachomatis 2713 1368 0.50 844 Wolinella succinogenes 2056 776 0.38 882 Desulfovibrio vulgaris str. Hildenborough 3519 1001 0.28 883 Desulfovibrio vulgaris str. 'Miyazaki F' 3187 1056 0.33 915 Nitrosomonas europaea 2408 822 0.34 1097 Chlorobaculum tepidum 2286 588 0.26 1140 Synechococcus elongatus PCC 7942 2853 742 0.26 1299 Deinococcus radiodurans 3102 725 0.23 1309 Streptococcus mutans 2410 806 0.33 1313 Streptococcus pneumoniae 6081 1667 0.27 1351 Enterococcus faecalis 4669 1179 0.25 1392 Bacillus anthracis 6823 1614 0.24 1423 Bacillus subtilis 5575 2299 0.41 1488 Clostridium acetobutylicum 3888 1011 0.26 1502 Clostridium perfringens 4197 1103 0.26 1513 Clostridium tetani 2425 720 0.30 1639 Listeria monocytogenes 6658 2060 0.31 1642 Listeria innocua 3177 962 0.30 1717 Corynebacterium diphtheriae 2338 602 0.26 1718 Corynebacterium glutamicum 4531 1040 0.23 1765 Mycobacterium bovis 4008 1008 0.25 1769 Mycobacterium leprae 2327 560 0.24 1770 Mycobacterium avium subsp. paratuberculosis 4492 805 0.18 1773 Mycobacterium tuberculosis 6136 2464 0.40 1902 Streptomyces coelicolor 8227 1785 0.22 2336 Thermotoga maritima 1888 629 0.33 2371 Xylella fastidiosa 3123 839 0.27 2734 Symbiobacterium thermophilum 3315 899 0.27 2880 Ectocarpus siliculosus 16429 2907 0.18 3055 Chlamydomonas reinhardtii 15107 3586 0.24 3067 Volvox carteri 14446 2426 0.17 3694 Populus trichocarpa 44193 14478 0.33 3702 Arabidopsis thaliana 55315 24677 0.45 3988 Ricinus communis 31454 5983 0.19 4558 Sorghum bicolor 33827 9539 0.28 5660 Leishmania braziliensis 8216 1480 0.18 5664 Leishmania major 8328 1499 0.18 5671 Leishmania infantum 8243 1467 0.18 5693 Trypanosoma cruzi 12520 1760 0.14 5722 Trichomonas vaginalis 50499 3697 0.07 5759 Entamoeba histolytica 8396 1721 0.20 5762 Naegleria gruberi 15732 2596 0.17 5786 Dictyostelium purpureum 12353 2177 0.18 5811 Toxoplasma gondii 19252 3072 0.16 5823 Plasmodium berghei ANKA 11662 1059 0.09 5825 Plasmodium chabaudi 14689 1153 0.08 5851 Plasmodium knowlesi strain H 5102 947 0.19 5865 Babesia bovis 4124 851 0.21 5874 Theileria annulata 4170 815 0.20 5875 Theileria parva 4182 845 0.20 5888 Paramecium tetraurelia 39936 5357 0.13 6183 Schistosoma mansoni 12686 3325 0.26 6238 Caenorhabditis briggsae 21792 4740 0.22 6239 Caenorhabditis elegans 24302 7254 0.30 6279 Brugia malayi 11559 2858 0.25 6334 Trichinella spiralis 16259 2773 0.17 6945 Ixodes scapularis 21118 4270 0.20 7070 Tribolium castaneum 17002 4399 0.26 7159 Aedes aegypti 16999 5341 0.31 7165 Anopheles gambiae 15863 4632 0.29 7176 Culex quinquefasciatus 19010 5512 0.29 7209 Loa loa 16308 3080 0.19 7217 Drosophila ananassae 15296 4228 0.28 7220 Drosophila erecta 15111 4095 0.27 7222 Drosophila grimshawi 14793 4095 0.28 7227 Drosophila melanogaster 36427 14597 0.40 7230 Drosophila mojavensis 14922 3992 0.27 7234 Drosophila persimilis 16859 4203 0.25 7238 Drosophila sechellia 16362 4336 0.27 7240 Drosophila simulans 18801 5077 0.27 7244 Drosophila virilis 14916 4204 0.28 7245 Drosophila yakuba 17248 4476 0.26 7260 Drosophila willistoni 15560 4110 0.26 7425 Nasonia vitripennis 306 129 0.42 7719 Ciona intestinalis 21006 6220 0.30 7739 Branchiostoma floridae 29216 8361 0.29 7955 Danio rerio 55536 26050 0.47 8364 Xenopus (Silurana) tropicalis 30546 12706 0.42 9031 Gallus gallus 27053 15261 0.56 9103 Meleagris gallopavo 16031 6119 0.38 9258 Ornithorhynchus anatinus 26916 13451 0.50 9305 Sarcophilus harrisii 22510 8819 0.39 9483 Callithrix jacchus 42151 16210 0.38 9541 Macaca fascicularis 24233 10391 0.43 9544 Macaca mulatta 51666 20807 0.40 9595 Gorilla gorilla gorilla 27367 10866 0.40 9598 Pan troglodytes 4408 2463 0.56 9606 Homo sapiens 117995 66410 0.56 9615 Canis lupus familiaris 28063 12749 0.45 9646 Ailuropoda melanoleuca 35659 17759 0.50 9785 Loxodonta africana 25787 11186 0.43 9796 Equus caballus 24031 14394 0.60 9823 Sus scrofa 26249 15838 0.60 9913 Bos taurus 33658 21055 0.63 9986 Oryctolagus cuniculus 25898 11349 0.44 10029 Cricetulus griseus 24421 8441 0.35 10090 Mus musculus 77140 54881 0.71 10116 Rattus norvegicus 41625 24512 0.59 10228 Trichoplax adhaerens 11585 3496 0.30 10243 Cowpox virus 2187 313 0.14 10244 Monkeypox virus 619 62 0.10 10246 Vaccinia virus LC16MO 2 2 1.00 10247 Vaccinia virus WR 65-16 1 1 1.00 10248 Vaccinia virus LC16M8 2 1 0.50 10249 Vaccinia virus Copenhagen 258 100 0.39 10250 Vaccinia virus Dairen I 3 3 1.00 10251 Vaccinia virus IHD-J 2 2 1.00 10252 Vaccinia virus Lister 2 2 1.00 10253 Vaccinia virus Tian Tan 239 36 0.15 10254 Vaccinia virus WR 257 105 0.41 10259 Orf virus (strain NZ2) 7 4 0.57 10272 Rabbit fibroma virus (strain Kasza) 153 22 0.14 10280 Molluscum contagiosum virus subtype 1 261 26 0.10 10281 Molluscum contagiosum virus subtype 2 3 3 1.00 10298 Human herpesvirus 1 2875 369 0.13 10299 Herpes simplex virus (type 1 / strain 17) 73 68 0.93 10300 Herpes simplex virus (type 1 / strain A44) 1 1 1.00 10301 Herpes simplex virus (type 1 / strain Angelotti) 3 3 1.00 10302 Herpes simplex virus (type 1 / strain CL101) 1 0 0.00 10303 Herpes simplex virus (type 1 / strain HFEM) 6 3 0.50 10304 Herpes simplex virus (type 1 / strain F) 15 13 0.87 10305 Herpes simplex virus (type 1 / strain HZT) 1 1 1.00 10306 Human herpesvirus 1 strain KOS 13 11 0.85 10307 Herpes simplex virus (type 1 / strain MP) 3 3 1.00 10308 Herpes simplex virus (type 1 / strain Patton) 2 2 1.00 10309 Herpes simplex virus (type 1 / strain SC16) 2 1 0.50 10310 Human herpesvirus 2 550 254 0.46 10312 Human herpesvirus 2 strain 186 1 1 1.00 10313 Human herpesvirus 2 strain 333 12 9 0.75 10314 Human herpesvirus 2 strain G 5 3 0.60 10315 Human herpesvirus 2 strain HG52 74 66 0.89 10316 Human herpesvirus 2 strain SA8 2 2 1.00 10323 Bovine herpesvirus type 1.1 (strain Cooper) 73 26 0.36 10325 Macacine herpesvirus 1 187 54 0.29 10333 Equine herpesvirus type 4 (strain 1942) 97 34 0.35 10338 Human herpesvirus 3 strain Dumas 69 61 0.88 10359 Human herpesvirus 5 4457 1317 0.30 10360 Human herpesvirus 5 strain AD169 198 100 0.51 10362 Human herpesvirus 5 strain Eisenhardt 1 0 0.00 10363 Human herpesvirus 5 strain Towne 182 43 0.24 10367 Murine cytomegalovirus (strain Smith) 15 12 0.80 10369 Human herpesvirus 6 (strain GS) 14 9 0.64 10370 Human herpesvirus 6 (strain Uganda-1102) 103 47 0.46 10376 Human herpesvirus 4 1771 1487 0.84 10377 Human herpesvirus 4 (strain B95-8) 117 57 0.49 10378 Human herpesvirus 4 (strain RAJI) 1 1 1.00 10383 Herpesvirus saimiri (strain 11) 75 34 0.45 10389 Marek's disease herpesvirus type 1 strain MD5 90 60 0.67 10406 Ground squirrel hepatitis virus 5 4 0.80 10409 Hepatitis B virus adr4 5 4 0.80 10410 Hepatitis B virus adw/991 5 4 0.80 10411 Hepatitis B virus alpha1 5 3 0.60 10412 Hepatitis B virus adw/Indonesia/PIDW420 5 4 0.80 10413 Hepatitis B virus adw/Japan/PJDW233 5 4 0.80 10414 Hepatitis B virus LSH/chimpanzee 7 5 0.71 10415 Hepatitis B virus adw/Okinawa/PODW282 5 4 0.80 10419 Hepatitis B virus subtype adyw 3 2 0.67 10421 Hepatitis delta virus (ISOLATE 7/18/83) 2 2 1.00 10422 Hepatitis delta virus (ISOLATE AMERICAN) 2 2 1.00 10423 Hepatitis delta virus (ISOLATE ITALIAN) 2 2 1.00 10424 Hepatitis delta virus (ISOLATE JAPANESE M-1) 2 2 1.00 10425 Hepatitis delta virus (ISOLATE JAPANESE M-2) 2 2 1.00 10426 Hepatitis delta virus (ISOLATE NAURU) 2 2 1.00 10427 Hepatitis delta virus (ISOLATE JAPANESE S-1) 2 2 1.00 10428 Hepatitis delta virus (ISOLATE JAPANESE S-2) 2 2 1.00 10430 Woodchuck hepatitis virus 1 5 4 0.80 10431 Woodchuck hepatitis virus 59 5 4 0.80 10432 Woodchuck hepatitis virus 7 5 4 0.80 10433 Woodchuck hepatitis virus 8 5 4 0.80 10439 Duck hepatitis B virus brown Shanghai duck/S5 4 3 0.75 10440 Duck hepatitis B virus white Shanghai duck/S31 4 3 0.75 10480 Thermoproteus tenax virus 1 (STRAIN KRA1) 37 5 0.14 10498 African swine fever virus BA71V 150 54 0.36 10500 African swine fever virus Malawi LIL 20/1 156 55 0.35 10506 Paramecium bursaria Chlorella virus 1 853 41 0.05 10515 Human adenovirus 2 353 293 0.83 10519 Human adenovirus 7 271 106 0.39 10522 Human adenovirus 35 61 18 0.30 10524 Human adenovirus 41 378 253 0.67 10527 Human adenovirus 9 65 26 0.40 10529 Human adenovirus 31 67 32 0.48 10533 Human adenovirus 1 143 130 0.91 10534 Human adenovirus 6 135 77 0.57 10553 Fowl adenovirus 1 88 21 0.24 10559 Bovine papillomavirus type 1 46 34 0.74 10560 Bovine papillomavirus type 2 38 31 0.82 10561 Bovine papillomavirus 3 9 5 0.56 10562 Bovine papillomavirus type 4 12 5 0.42 10564 Deer papillomavirus 9 7 0.78 10565 European elk papillomavirus 18 9 0.50 10570 Rhesus monkey papillomavirus 1 20 18 0.90 10573 Human papillomavirus type 13 18 14 0.78 10576 Pygmy chimpanzee papillomavirus type 1 8 6 0.75 10579 Human papillomavirus type 8 9 8 0.89 10580 Human papillomavirus type 11 100 78 0.78 10583 Human papillomavirus type 1a 8 6 0.75 10584 Human papillomavirus type 2a 7 6 0.86 10585 Human papillomavirus type 31 301 233 0.77 10586 Human papillomavirus type 33 133 111 0.83 10587 Human papillomavirus type 35 96 76 0.79 10588 Human papillomavirus type 39 54 30 0.56 10589 Human papillomavirus type 41 11 6 0.55 10590 Human papillomavirus type 42 40 15 0.38 10591 Human papillomavirus type 43 12 9 0.75 10592 Human papillomavirus type 44 9 6 0.67 10593 Human papillomavirus type 45 65 55 0.85 10594 Human papillomavirus type 47 8 6 0.75 10595 Human papillomavirus type 51 42 25 0.60 10596 Human papillomavirus type 56 91 72 0.79 10598 Human papillomavirus type 58 476 403 0.85 10599 Human papillomavirus type 5b 13 10 0.77 10600 Human papillomavirus type 6b 9 6 0.67 10601 Human papillomavirus type 6c 3 0 0.00 10602 Human papillomavirus type me180 4 4 1.00 10604 Human papillomavirus type 12 7 7 1.00 10605 Human papillomavirus type 14 7 6 0.86 10606 Human papillomavirus type 15 6 6 1.00 10607 Human papillomavirus type 17 6 6 1.00 10608 Human papillomavirus type 19 8 6 0.75 10609 Human papillomavirus type 25 9 6 0.67 10611 Human papillomavirus type 30 13 7 0.54 10614 Human papillomavirus type 3 9 8 0.89 10615 Human papillomavirus type 40 9 7 0.78 10616 Human papillomavirus type 49 8 7 0.88 10617 Human papillomavirus type 4 9 7 0.78 10618 Human papillomavirus type 52 261 197 0.75 10620 Human papillomavirus type 7 6 6 1.00 10621 Human papillomavirus type 9 7 7 1.00 10625 Budgerigar fledgling disease polyomavirus 154 73 0.47 10626 Hamster polyomavirus 10 10 1.00 10627 Bovine polyomavirus 19 18 0.95 10629 BK polyomavirus 1417 1156 0.82 10631 BK virus strain AS 5 5 1.00 10632 JC polyomavirus 3785 2128 0.56 10633 Simian virus 40 168 46 0.27 10635 Mouse polyomavirus (strain 3) 6 6 1.00 10636 Murine polyomavirus strain A2 5 5 1.00 10637 Mouse polyomavirus (strain Crawford small-plaque) 5 5 1.00 10640 Carnation etched ring virus 23 8 0.35 10644 Cauliflower mosaic virus (STRAIN CM-1841) 6 4 0.67 10645 Cauliflower mosaic virus (STRAIN D/H) 8 4 0.50 10648 Cauliflower mosaic virus (STRAIN STRASBOURG) 6 4 0.67 10650 Figwort mosaic virus (STRAIN DXS) 7 4 0.57 10651 Soybean chlorotic mottle virus 9 3 0.33 10653 Commelina yellow mottle virus 3 0 0.00 10655 Rice tungro bacilliform virus (isolate Philippines) 4 1 0.25 10658 Enterobacteria phage PRD1 61 21 0.34 10661 Pseudoalteromonas phage PM2 21 12 0.57 10665 Enterobacteria phage T4 616 64 0.10 10677 Enterobacteria phage Mu 72 0 0.00 10678 Enterobacteria phage P1 160 1 0.01 10679 Enterobacteria phage P2 99 8 0.08 10680 Enterobacteria phage P4 15 1 0.07 10685 Bacillus phage SPO1 239 6 0.03 10690 Haemophilus phage HP1 41 6 0.15 10710 Enterobacteria phage lambda 140 19 0.14 10719 Streptomyces phage phiC31 64 2 0.03 10726 Enterobacteria phage T5 268 15 0.06 10752 Enterobacteria phage N4 72 1 0.01 10754 Enterobacteria phage P22 151 12 0.08 10756 Bacillus phage phi29 59 4 0.07 10757 Bacillus phage PZA 27 2 0.07 10760 Enterobacteria phage T7 458 6 0.01 10783 Aleutian mink disease parvovirus (STRAIN G) 4 1 0.25 10787 Feline panleukopenia virus (strain 193) 2 1 0.50 10791 Canine parvovirus strain N 2 1 0.50 10793 Mink enteritis virus strain Abashiri 2 1 0.50 10795 Murine minute virus (STRAIN MVMI) 2 1 0.50 10797 Porcine parvovirus NADL-2 2 1 0.50 10799 H-1 parvovirus 4 2 0.50 10808 Aedes densonucleosis virus (STRAIN GKV 002 002) 2 1 0.50 10809 Bombyx mori densovirus 5 0 0.00 10816 Abutilon mosaic virus - [WEST INDIA] 7 5 0.71 10818 African cassava mosaic virus - [West Kenya 844] 8 6 0.75 10822 Maize streak virus - [Kenya] 4 4 1.00 10823 Maize streak virus - [Nigeria] 4 4 1.00 10824 Maize streak virus - [South Africa] 4 4 1.00 10829 Squash leaf curl virus 66 47 0.71 10843 Enterobacteria phage G4 55 20 0.36 10844 Enterobacteria phage S13 21 9 0.43 10847 Enterobacteria phage phiX174 284 122 0.43 10848 Enterobacteria phage phiK 10 5 0.50 10849 Enterobacteria phage alpha3 22 10 0.45 10854 Spiroplasma phage 1-R8A2B 12 10 0.83 10855 Spiroplasma phage 4 9 5 0.56 10857 Chlamydia phage Chp1 8 4 0.50 10863 Enterobacteria phage f1 53 20 0.38 10864 Enterobacteria phage fd 10 7 0.70 10867 Enterobacteria phage Ike 11 7 0.64 10868 Enterobacteria phage If1 10 7 0.70 10870 Enterobacteria phage M13 13 11 0.85 10871 Pseudomonas phage Pf1 27 6 0.22 10872 Pseudomonas phage Pf3 9 5 0.56 10879 Pseudomonas phage phi6 147 11 0.07 10884 Mammalian orthoreovirus 1 Lang 33 21 0.64 10885 Mammalian orthoreovirus 2 D5/Jones 34 14 0.41 10886 Mammalian orthoreovirus 3 Dearing 52 19 0.37 10900 Bluetongue virus (serotype 10 / American isolate) 11 7 0.64 10916 Porcine rotavirus C strain Cowden 11 10 0.91 10933 Bovine rotavirus strain RF 12 11 0.92 10934 Bovine rotavirus strain UK/G6 12 11 0.92 10942 Human rotavirus B 154 31 0.20 10944 Human rotavirus serotype 1 / strain 1076 3 3 1.00 10947 Human rotavirus serotype 1 / strain 69M 12 11 0.92 10948 Human rotavirus (SEROTYPE 2 / STRAIN HU5) 1 1 1.00 10949 Human rotavirus (SEROTYPE G / STRAIN B37) 3 3 1.00 10950 Human rotavirus (SEROTYPE 2 / STRAIN DS1) 12 11 0.92 10951 Human rotavirus (SEROTYPE 2 / STRAIN HN126) 1 1 1.00 10952 Human rotavirus strain KU 12 11 0.92 10953 Human rotavirus (STRAIN L26) 12 11 0.92 10954 Human rotavirus serotype 1 / strain M37 4 4 1.00 10955 Human rotavirus strain MCN13 1 1 1.00 10956 Human rotavirus serotype 1 / strain MO 3 3 1.00 10957 Human rotavirus strain P 12 10 0.83 10959 Human rotavirus (SEROTYPE 2 / STRAIN S2) 7 6 0.86 10960 Human rotavirus G4 strain St. Thomas 3 12 11 0.92 10961 Human rotavirus G4 strain VA70 3 3 1.00 10962 Human rotavirus strain WA 28 27 0.96 10986 Rice gall dwarf virus 48 20 0.42 11003 Infectious pancreatic necrosis virus - Jasper 3 2 0.67 11005 Infectious pancreatic necrosis virus - Sp 53 2 0.04 11008 Saccharomyces cerevisiae virus L-A (L1) 7 2 0.29 11020 Barmah Forest virus 33 31 0.94 11021 Eastern equine encephalitis virus 804 528 0.66 11022 Eastern equine encephalitis virus (STRAIN VA33[TEN BROECK]) 1 1 1.00 11028 O'nyong-nyong virus (strain Gulu) 2 2 1.00 11030 Ross river virus (STRAIN 213970) 1 1 1.00 11031 Ross river virus (STRAIN NB5092) 2 2 1.00 11032 Ross river virus (STRAIN T48) 2 2 1.00 11033 Semliki forest virus 21 17 0.81 11034 Sindbis virus 177 145 0.82 11037 Venezuelan equine encephalitis virus (strain TC-83) 1 1 1.00 11038 Venezuelan equine encephalitis virus (strain Trinidad donkey) 2 2 1.00 11039 Western equine encephalomyelitis virus 103 96 0.93 11043 Rubella virus strain M33 2 2 1.00 11044 Rubella virus vaccine strain RA27/3 2 2 1.00 11045 Rubella virus strain Therien 2 2 1.00 11049 Lelystad virus 8 8 1.00 11057 Dengue virus 1 Thailand/AHF 82-80/1980 1 1 1.00 11058 Dengue virus 1 Jamaica/CV1636/1977 1 1 1.00 11059 Dengue virus 1 Nauru/West Pac/1974 1 1 1.00 11062 Dengue virus 2 Malaysia M2 1 1 1.00 11063 Dengue virus 2 Malaysia M3 1 1 1.00 11064 Dengue virus 2 Jamaica/1409/1983 1 1 1.00 11065 Dengue virus 2 Thailand/NGS-C/1944 1 1 1.00 11066 Dengue virus 2 Puerto Rico/PR159-S1/1969 1 1 1.00 11067 Dengue virus 2 Tonga/EKB194/1974 1 1 1.00 11068 Dengue virus 2 Thailand/PUO-218/1980 1 1 1.00 11073 Japanese encephalitis virus strain SA-14 2 2 1.00 11074 Japanese encephalitis virus strain SA(V) 1 1 1.00 11075 Japanese encephalitis virus strain JAOARS982 1 1 1.00 11076 Japanese encephalitis virus strain Nakayama 3 3 1.00 11078 Kunjin virus (STRAIN MRM61C) 1 1 1.00 11081 St. Louis encephalitis virus (strain MS1-7) 1 1 1.00 11082 West Nile virus 2043 1912 0.94 11086 Louping ill virus 15 8 0.53 11087 Tick-borne encephalitis virus (STRAIN SOFJIN) 1 1 1.00 11088 Tick-borne encephalitis virus (WESTERN SUBTYPE) 1 1 1.00 11090 Yellow fever virus 17D 1 1 1.00 11097 Hog cholera virus (strain Alfort) 1 1 1.00 11098 Classical swine fever virus - Brescia 1 1 1.00 11100 Bovine viral diarrhea virus 1-NADL 2 1 0.50 11104 Hepatitis C virus (isolate 1) 2 2 1.00 11105 Hepatitis C virus (isolate BK) 1 1 1.00 11106 Hepatitis C virus (isolate EC10) 1 1 1.00 11107 Hepatitis C virus (isolate EC1) 1 1 1.00 11108 Hepatitis C virus (isolate H) 2 2 1.00 11109 Hepatitis C virus (isolate HCT27) 1 1 1.00 11110 Hepatitis C virus (isolate HCT18) 1 1 1.00 11111 Hepatitis C virus (isolate HC-J2) 1 1 1.00 11112 Hepatitis C virus (isolate HC-J5) 1 1 1.00 11113 Hepatitis C virus isolate HC-J6 1 1 1.00 11114 Hepatitis C virus (isolate HC-J7) 1 1 1.00 11115 Hepatitis C virus isolate HC-J8 1 1 1.00 11116 Hepatitis C virus (isolate Japanese) 1 1 1.00 11117 Hepatitis C virus (isolate TH) 1 1 1.00 11122 Avian infectious bronchitis virus (strain Beaudette) 10 6 0.60 11127 Avian infectious bronchitis virus (strain M41) 10 6 0.60 11132 Bovine coronavirus Mebus 12 8 0.67 11133 Bovine coronavirus strain Quebec 12 8 0.67 11137 Human coronavirus 229E 111 74 0.67 11142 Murine hepatitis virus strain A59 23 17 0.74 11144 Murine hepatitis virus strain JHM 11 10 0.91 11151 Porcine transmissible gastroenteritis coronavirus strain Purdue 9 8 0.89 11156 Berne virus 9 6 0.67 11162 Mumps virus (STRAIN EDINGBURGH 2) 1 1 1.00 11163 Mumps virus (STRAIN EDINGBURGH 4) 1 1 1.00 11164 Mumps virus (STRAIN EDINGBURGH 6) 1 1 1.00 11165 Mumps virus (STRAIN MATSUYAMA) 1 1 1.00 11166 Mumps virus (STRAIN BELFAST) 1 1 1.00 11167 Mumps virus (STRAIN ENDERS) 3 1 0.33 11168 Mumps virus strain Jeryl Lynn 28 16 0.57 11169 Mumps virus (STRAIN KILHAM) 1 1 1.00 11170 Mumps virus (STRAIN BRISTOL 1) 1 1 1.00 11171 Mumps virus (STRAIN MIYAHARA VACCINE) 8 6 0.75 11172 Mumps virus (STRAIN RW) 3 3 1.00 11173 Mumps virus (STRAIN SBL-1) 7 5 0.71 11174 Mumps virus (STRAIN TAKAHASHI) 1 1 1.00 11175 Mumps virus (STRAIN URABE VACCINE AM9) 1 1 1.00 11195 Sendai virus (strain Fushimi) 11 7 0.64 11198 Sendai virus (Z) 9 6 0.67 11208 Simian virus 5 (strain W3) 8 6 0.75 11210 Human parainfluenza virus 1 (C39) 5 3 0.60 11211 HPIV-1 (human/Washington/1957) 2 2 1.00 11212 Human parainfluenza virus 2 37 33 0.89 11213 Human parainfluenza virus 2 (strain Greer) 1 1 1.00 11214 Human parainfluenza virus 2 (strain Toshiba) 7 5 0.71 11217 Human parainfluenza 3 virus (strain NIH 47885) 7 5 0.71 11218 Human parainfluenza 3 virus (strain AUS/124854/74) 1 1 1.00 11219 Human parainfluenza 3 virus (strain TEX/545/80) 1 1 1.00 11220 Human parainfluenza 3 virus (strain TEX/9305/82) 1 1 1.00 11221 Human parainfluenza 3 virus (strain TEX/12677/83) 1 1 1.00 11222 Human parainfluenza 3 virus (strain WASH/641/79) 1 1 1.00 11223 Human parainfluenza 3 virus (strain WASH/1511/73) 1 1 1.00 11225 Human parainfluenza virus 4a (strain Toshiba) 5 3 0.60 11227 Human parainfluenza virus 4b (strain 68-333) 4 2 0.50 11228 Simian virus 41 9 6 0.67 11233 Canine distemper virus strain Onderstepoort 17 10 0.59 11235 Measles virus strain Edmonston 10 5 0.50 11236 Measles virus strain Halle 5 4 0.80 11237 Measles virus strain IP-3-CA 7 4 0.57 11238 Measles virus strain HU2 1 1 1.00 11239 Measles virus strain Yamagata-1 7 4 0.57 11247 Bovine respiratory syncytial virus ATCC51908 12 10 0.83 11250 Human respiratory syncytial virus 4364 3959 0.91 11251 Human respiratory syncytial virus (subgroup B / strain 18537) 8 7 0.88 11252 Human respiratory syncytial virus (strain RSB642) 1 1 1.00 11253 Human respiratory syncytial virus (strain RSB1734) 1 1 1.00 11254 Human respiratory syncytial virus (strain RSB5857) 1 1 1.00 11255 Human respiratory syncytial virus (strain RSB6190) 1 1 1.00 11256 Human respiratory syncytial virus (strain RSB6256) 1 1 1.00 11257 Human respiratory syncytial virus (strain RSB6614) 1 1 1.00 11258 Human respiratory syncytial virus (subgroup B / strain 8/60) 2 2 1.00 11259 Human respiratory syncytial virus A2 13 10 0.77 11260 Human respiratory syncytial virus A strain Long 6 6 1.00 11261 Human respiratory syncytial virus strain RSS-2 1 1 1.00 11273 Chandipura virus I653514 7 5 0.71 11278 Vesicular stomatitis Indiana virus strain Glasgow 5 4 0.80 11279 Vesicular stomatitis Indiana virus strain Mudd-Summers 4 3 0.75 11281 Vesicular stomatitis virus (serotype New Jersey / strain Hazelhurst) 1 1 1.00 11282 Vesicular stomatitis virus (serotype New Jersey / strain Missouri) 2 1 0.50 11283 Vesicular stomatitis virus (serotype New Jersey / strain Ogden) 6 5 0.83 11284 Vesicular stomatitis Indiana virus strain Orsay 1 1 1.00 11285 Vesicular stomatitis Indiana virus strain San Juan 6 5 0.83 11293 Rabies virus AVO1 6 5 0.83 11294 Rabies virus CVS-11 4 4 1.00 11295 Rabies virus ERA 5 5 1.00 11296 Rabies virus HEP-FLURY 5 5 1.00 11297 Rabies virus PM 1 1 1.00 11298 Rabies virus Nishigahara RCEH 5 5 1.00 11300 Rabies virus SAD B19 5 5 1.00 11307 Sonchus yellow net virus 6 5 0.83 11319 Dhori virus (strain Indian/1313/61) 5 3 0.60 11340 Influenza A virus (A/chicken/Japan/24(H7N7)) 2 2 1.00 11375 Influenza A virus (A/Dunedin/4/73(H3N2)) 2 2 1.00 11384 Influenza A virus (A/chicken/FPV/Weybridge(H7N7)) 5 5 1.00 11397 Influenza A virus (A/equine/Cornell/16/74(H7N7)) 7 4 0.57 11418 Influenza A virus (STRAIN A/EQUINE/TOKYO/71) 1 1 1.00 11482 Influenza A virus (STRAIN A/VICTORIA/5/68) 1 1 1.00 11495 Influenza A virus (STRAIN A/SWINE/GERMANY/2/81) 1 1 1.00 11521 Influenza B virus (B/Ann Arbor/1/1986) 13 8 0.62 11522 Influenza B virus (B/Ann Arbor/1/1966 [cold-adapted]) 7 4 0.57 11523 Influenza B virus (B/Ann Arbor/1/1966 [wild- type]) 7 4 0.57 11524 Influenza B virus (STRAIN B/BA/78) 1 0 0.00 11525 Influenza B virus (STRAIN B/BEIJING/1/87) 3 3 1.00 11527 Influenza B virus (STRAIN B/ENGLAND/222/82) 1 1 1.00 11528 Influenza B virus (B/FUKUOKA/80/81) 1 1 1.00 11529 Influenza B virus (B/GA/86) 1 0 0.00 11530 Influenza B virus (STRAIN B/GL/54) 2 1 0.50 11531 Influenza B virus (STRAIN B/HONG KONG/8/73) 4 3 0.75 11532 Influenza B virus (STRAIN B/HT/84) 1 0 0.00 11534 Influenza B virus (STRAIN B/ID/86) 2 1 0.50 11536 Influenza B virus (STRAIN B/LENINGRAD/179/86) 2 2 1.00 11537 Influenza B virus (STRAIN B/MARYLAND/59) 4 3 0.75 11538 Influenza B virus (STRAIN B/MEMPHIS/6/86) 3 3 1.00 11540 Influenza B virus (STRAIN B/NAGASAKI/1/87) 1 1 1.00 11541 Influenza B virus (B/Oregon/5/80) 3 3 1.00 11542 Influenza B virus (STRAIN B/PA/79) 1 0 0.00 11543 Influenza B virus (STRAIN B/RU/69) 1 0 0.00 11545 Influenza B virus (STRAIN B/SINGAPORE/64) 2 1 0.50 11547 Influenza B virus (STRAIN B/VICTORIA/3/85) 3 3 1.00 11548 Influenza B virus (STRAIN B/VICTORIA/87) 1 0 0.00 11550 Influenza B virus (B/Yamagata/1/73) 5 4 0.80 11553 Influenza C virus (C/Ann Arbor/1/50) 10 5 0.50 11554 Influenza C virus (C/Berlin/1/85) 1 0 0.00 11556 Influenza C virus (C/England/892/1983) 1 1 1.00 11557 Influenza C virus (C/Great Lakes/1167/1954) 3 3 1.00 11560 Influenza C virus (C/JJ/1950) 13 5 0.38 11564 Influenza C virus (C/pig/Beijing/10/1981) 1 1 1.00 11566 Influenza C virus (C/PIG/Beijing/439/1982) 1 1 1.00 11567 Influenza C virus (C/Taylor/1233/1947) 4 4 1.00 11568 Influenza C virus (C/Yamagata/10/1981) 5 3 0.60 11577 La Crosse virus 287 55 0.19 11578 La Crosse virus L74 2 1 0.50 11580 Snowshoe hare virus 8 3 0.38 11583 HoJo virus 1 1 1.00 11587 Punta Toro virus 14 6 0.43 11588 Rift Valley fever virus 535 258 0.48 11589 Rift valley fever virus (STRAIN ZH-548 M12) 4 2 0.50 11590 Toscana virus 110 72 0.65 11594 Crimean-Congo hemorrhagic fever virus (isolate C68031) 1 1 1.00 11595 Dugbe virus 86 34 0.40 11601 Hantaan virus Lee 1 1 1.00 11602 Hantaan virus 76-118 3 2 0.67 11605 Puumala virus (STRAIN HALLNAS B1) 3 2 0.67 11610 Seoul virus SR11 2 2 1.00 11619 Junin virus 200 165 0.82 11621 Lassa virus GA391 2 2 1.00 11622 Lassa virus Josiah 4 4 1.00 11624 Lymphocytic choriomeningitis virus (strain Armstrong) 4 4 1.00 11625 Lymphocytic choriomeningitis virus (strain Pasteur) 1 1 1.00 11626 Lymphocytic choriomeningitis virus (strain Traub) 1 1 1.00 11627 Lymphocytic choriomeningitis virus (strain WE) 46 46 1.00 11628 Machupo virus 107 92 0.86 11630 Pichinde virus 22 18 0.82 11644 Simian foamy virus (TYPE 3 / STRAIN LK3) 5 4 0.80 11678 Human immunodeficiency virus type 1 BH10 9 9 1.00 11679 Human immunodeficiency virus type 1 (CLONE 12) 5 5 1.00 11680 Human immunodeficiency virus type 1 (ZAIRE 3 ISOLATE) 4 4 1.00 11681 Human immunodeficiency virus type 1 (Z-84 ISOLATE) 5 5 1.00 11682 Human immunodeficiency virus type 1 (BH5 ISOLATE) 5 5 1.00 11683 Human immunodeficiency virus type 1 (Z2/CDC-Z34 ISOLATE) 9 9 1.00 11684 Human immunodeficiency virus type 1 (BH8 ISOLATE) 4 4 1.00 11685 HIV-1 M:B_ARV2/SF2 9 9 1.00 11686 Human immunodeficiency virus type 1 (BRU ISOLATE) 9 9 1.00 11687 Human immunodeficiency virus type 1 (CDC-451 ISOLATE) 7 7 1.00 11688 Human immunodeficiency virus type 1 (JRCSF ISOLATE) 9 9 1.00 11689 Human immunodeficiency virus type 1 (ELI ISOLATE) 9 9 1.00 11690 Human immunodeficiency virus type 1 (SF33 ISOLATE) 5 5 1.00 11691 Human immunodeficiency virus type 1 (SF162 ISOLATE) 5 5 1.00 11692 Human immunodeficiency virus type 1 (ZAIRE HZ321 ISOLATE) 5 5 1.00 11693 Human immunodeficiency virus type 1 (BRAIN ISOLATE) 5 5 1.00 11694 Human immunodeficiency virus type 1 (JH3 ISOLATE) 7 7 1.00 11695 Human immunodeficiency virus type 1 (NDK ISOLATE) 8 8 1.00 11696 HIV-1 M:B_MN 9 9 1.00 11697 Human immunodeficiency virus type 1 (MAL ISOLATE) 9 9 1.00 11698 Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE) 6 6 1.00 11699 Human immunodeficiency virus type 1 (OYI ISOLATE) 8 8 1.00 11701 Human immunodeficiency virus type 1 (RF/HAT ISOLATE) 9 9 1.00 11702 Human immunodeficiency virus type 1 (SC ISOLATE) 7 7 1.00 11703 Human immunodeficiency virus type 1 (STRAIN UGANDAN / ISOLATE U455) 6 6 1.00 11704 Human immunodeficiency virus type 1 (MFA ISOLATE) 1 1 1.00 11705 Human immunodeficiency virus type 1 (WMJ2 ISOLATE) 5 5 1.00 11706 HIV-1 M:B_HXB2R 9 9 1.00 11707 Human immunodeficiency virus type 1 (HXB3 ISOLATE) 6 6 1.00 11708 Human immunodeficiency virus type 1 (ZAIRE 6 ISOLATE) 6 6 1.00 11713 Human immunodeficiency virus type 2 (ISOLATE D194) 9 9 1.00 11714 Human immunodeficiency virus type 2 (ISOLATE BEN) 9 9 1.00 11715 Human immunodeficiency virus type 2 (ISOLATE CAM2) 9 9 1.00 11716 Human immunodeficiency virus type 2 (ISOLATE D205,7) 9 9 1.00 11717 Human immunodeficiency virus type 2 (ISOLATE GHANA-1) 9 9 1.00 11718 Human immunodeficiency virus type 2 (ISOLATE SBLISY) 9 9 1.00 11719 Human immunodeficiency virus type 2 (ISOLATE NIH-Z) 9 9 1.00 11720 Human immunodeficiency virus type 2 (ISOLATE ROD) 9 9 1.00 11721 Human immunodeficiency virus type 2 (ISOLATE ST) 10 9 0.90 11723 Simian immunodeficiency virus 25978 16071 0.62 11733 Simian immunodeficiency virus (MM142-83 ISOLATE) 9 9 1.00 11737 Simian immunodeficiency virus (F236/SMH4 ISOLATE) (SOOTY MANGABEY) 9 9 1.00 11738 Simian immunodeficiency virus (PBJ/BC13 ISOLATE) (SOOTY MANGABEY) 9 9 1.00 11746 Jaagsiekte sheep retrovirus 50 16 0.32 11759 Mouse mammary tumor virus (STRAIN C3H) 5 5 1.00 11764 Baboon endogenous virus strain M7 5 2 0.40 11787 Radiation murine leukemia virus 3 2 0.67 11791 AKR (endogenous) murine leukemia virus 3 2 0.67 11796 Friend murine leukemia virus (ISOLATE 57) 3 2 0.67 11797 Friend murine leukemia virus (ISOLATE FB29) 3 2 0.67 11798 Friend murine leukemia virus (ISOLATE PVC-211) 3 2 0.67 11840 Gibbon ape leukemia virus 12 8 0.67 11855 Mason-Pfizer monkey virus 8 6 0.75 11856 Squirrel monkey retrovirus 5 4 0.80 11888 Rous sarcoma virus - Prague C 5 3 0.60 11909 Human T-lymphotropic virus 2 316 30 0.09 11926 Human T-cell lymphotrophic virus type 1 (strain ATK) 9 9 1.00 11927 Human T-cell lymphotrophic virus type 1 (Caribbean isolate) 9 9 1.00 11928 Human T-cell lymphotrophic virus type 1 (isolate MT-2) 2 2 1.00 11942 Simian retrovirus 1 6 3 0.50 11963 Human spumaretrovirus 16 10 0.63 11977 Rabbit hemorrhagic disease virus-V351 3 2 0.67 11979 Feline calicivirus (STRAIN CFI/68 FIV) 3 2 0.67 11980 Feline calicivirus (STRAIN JAPANESE F4) 3 2 0.67 11981 Feline calicivirus (STRAIN F9) 3 2 0.67 11988 Turnip crinkle virus 35 33 0.94 12017 Enterobacteria phage fr 5 1 0.20 12018 Enterobacteria phage GA 4 1 0.25 12027 Enterobacteria phage SP 27 14 0.52 12040 Barley yellow dwarf virus-PAV 435 176 0.40 12043 Beet western yellows virus-FL1 6 5 0.83 12046 Potato leafroll virus (STRAIN 1) 9 6 0.67 12048 Potato leafroll virus (STRAIN WAGENINGEN) 8 5 0.63 12055 Tobacco necrosis virus A 16 6 0.38 12060 Human echovirus 9 380 284 0.75 12065 Bovine enterovirus strain VG-5-27 1 1 1.00 12068 Human coxsackievirus A9 (strain Griggs) 1 1 1.00 12070 Human coxsackievirus A21 (strain Coe) 1 1 1.00 12076 Swine vesicular disease virus (STRAIN H/3 '76) 1 1 1.00 12077 Swine vesicular disease virus (STRAIN UKG/27/72) 1 1 1.00 12081 Human poliovirus 1 Mahoney 3 3 1.00 12082 Human poliovirus 1 strain Sabin 33 22 0.67 12084 Poliovirus type 2 strain Lansing 1 1 1.00 12085 Poliovirus type 2 strain W-2 1 1 1.00 12087 Poliovirus type 3 (strain 23127) 1 1 1.00 12088 Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B) 1 1 1.00 12093 Human hepatitis A virus Shanghai/LCDC-1/1984 1 1 1.00 12097 Human hepatitis A virus Hu/Costa Rica/CR326/1960 1 1 1.00 12098 Human hepatitis A virus Hu/Australia/HM175/1976 1 1 1.00 12099 Human hepatitis A virus Hu/Los Angelos/LA/1975 1 1 1.00 12100 Human hepatitis A virus Hu/Northern Africa/MBB/1978 1 1 1.00 12102 Simian hepatitis A virus Cercopithecus/Kenya/AGM-27/1985 1 1 1.00 12104 Encephalomyocarditis virus 106 22 0.21 12105 Encephalomyocarditis virus strain emc-b nondiabetogenic 1 1 1.00 12106 Encephalomyocarditis virus strain emc-d diabetogenic 1 1 1.00 12107 Mengo virus 2 2 1.00 12112 Foot-and-mouth disease virus (strain A10-61) 2 1 0.50 12114 Foot-and-mouth disease virus (strain A12) 1 1 1.00 12125 Theiler's encephalomyelitis virus (STRAIN BEAN 8386) 1 1 1.00 12126 Theiler's encephalomyelitis virus (STRAIN DA) 1 1 1.00 12127 Theiler's encephalomyelitis virus (STRAIN GDVII) 2 2 1.00 12129 Human rhinovirus 1B 3 2 0.67 12130 Human rhinovirus 2 5 5 1.00 12131 Human rhinovirus 14 3 3 1.00 12134 Human rhinovirus 1A 8 5 0.63 12143 Cucumber necrosis virus 12 8 0.67 12144 Cymbidium ringspot virus 8 5 0.63 12147 Tomato bushy stunt virus (STRAIN CHERRY) 4 3 0.75 12151 Eggplant mosaic virus 4 2 0.50 12153 Ononis yellow mosaic virus 3 1 0.33 12154 Turnip yellow mosaic virus 27 23 0.85 12155 Turnip yellow mosaic virus (Australian isolate) 3 1 0.33 12168 Potato virus M (strain Russian) 6 4 0.67 12179 Foxtail mosaic virus 15 7 0.47 12180 Narcissus mosaic virus 7 4 0.57 12181 Papaya mosaic virus 18 8 0.44 12183 Potato virus X 164 99 0.60 12184 Potato virus X (strain CP) 5 4 0.80 12185 Potato virus X (strain X3) 5 4 0.80 12187 Strawberry mild yellow edge virus 67 34 0.51 12189 White clover mosaic virus (strain M) 5 4 0.80 12190 White clover mosaic virus (strain O) 5 4 0.80 12197 Bean yellow mosaic virus 110 93 0.85 12212 Plum pox virus D 2 2 1.00 12213 Plum pox virus (isolate NAT) 2 2 1.00 12214 Plum pox virus (strain Rankovic) 1 1 1.00 12215 Potato virus A 70 55 0.79 12219 Potato virus Y strain N 17 9 0.53 12223 Soybean mosaic virus N 2 2 1.00 12227 Tobacco etch virus 86 45 0.52 12228 Tobacco vein mottling virus 6 3 0.50 12230 Turnip mosaic virus 1019 524 0.51 12236 Cucumber green mottle mosaic virus (watermelon strain SH) 3 1 0.33 12240 Sunn-hemp mosaic virus 3 1 0.33 12241 Tobacco mild green mosaic virus 52 22 0.42 12243 Tobacco mosaic virus (vulgare) 3 1 0.33 12251 Tobacco mosaic virus strain OM 3 1 0.33 12252 Tobacco mosaic virus strain tomato/L 3 1 0.33 12262 Red clover mottle virus 5 4 0.80 12267 Red clover necrotic mosaic virus 9 2 0.22 12273 Grapevine chrome mosaic virus 2 2 1.00 12274 Grapevine fanleaf virus 408 340 0.83 12281 Tomato ringspot virus (isolate raspberry) 4 2 0.50 12301 Broad bean mottle virus 6 3 0.50 12302 Brome mosaic virus 25 8 0.32 12303 Cowpea chlorotic mottle virus 20 8 0.40 12307 Cucumber mosaic virus (strain FNY) 5 4 0.80 12310 Cucumber mosaic virus (strain Q) 6 5 0.83 12315 Tomato aspermy virus 43 27 0.63 12318 Tobacco streak virus (strain WC) 5 4 0.80 12322 Alfalfa mosaic virus (strain 425 / isolate Leiden) 4 3 0.75 12327 Barley stripe mosaic virus 39 8 0.21 12455 Borna disease virus 308 16 0.05 12456 Human astrovirus 1 533 3 0.01 12478 Cryphonectria hypovirus 1-EP713 2 1 0.50 12538 Mokola virus 61 60 0.98 12557 Seoul virus 80-39 2 1 0.50 12701 Human astrovirus 2 69 1 0.01 12968 Blastocystis hominis 5831 1372 0.24 13373 Burkholderia mallei 4842 1420 0.29 13616 Monodelphis domestica 31612 14531 0.46 13642 Polysphondylium pallidum 12451 2441 0.20 13686 Solenopsis invicta 14334 3099 0.22 28276 Human adenovirus 15 58 24 0.41 28280 Human adenovirus 4 236 98 0.42 28282 Human adenovirus 12 42 16 0.38 28284 Human adenovirus 40 80 55 0.69 28285 Human adenovirus 5 174 112 0.64 28292 Sandfly fever sicilian virus 27 14 0.52 28300 Heron hepatitis B virus 11 10 0.91 28311 Human papillomavirus type 63 7 6 0.86 28312 Human papillomavirus type 65 7 6 0.86 28321 Amsacta moorei entomopoxvirus 'L' 279 10 0.04 28354 Plantago asiatica mosaic virus 24 7 0.29 28365 Xanthomonas phage Lf 9 6 0.67 28377 Anolis carolinensis 9333 3580 0.38 28450 Burkholderia pseudomallei 6147 1906 0.31 28877 IDIR agent 8 7 0.88 28901 Salmonella enterica 6241 2158 0.35 29252 Enterobacteria phage 186 45 2 0.04 29272 Turnip vein-clearing virus 10 5 0.50 29390 Streptococcus gordonii str. Challis 2056 662 0.32 29471 Pectobacterium atrosepticum 4558 1620 0.36 29519 Borrelia garinii 1992 802 0.40 29760 Vitis vinifera 54204 11565 0.21 31234 Caenorhabditis remanei 31838 5674 0.18 31510 Duck hepatitis B virus strain China 5 3 0.60 31512 Hepatitis B virus adr/mutant 4 2 0.50 31513 Hepatitis B virus adr/NC-1 1 1 1.00 31514 Hepatitis B virus adw/Philippino/PFDW294 4 3 0.75 31515 Hepatitis B virus adw2 variant SF 1 1 1.00 31520 Equine herpesvirus type 1 (strain AB4P) 75 57 0.76 31523 Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker) 79 22 0.28 31525 Human herpesvirus 4 (strain CAO) 1 1 1.00 31530 Myxoma virus (strain Lausanne) 159 24 0.15 31531 Vaccinia virus L-IPV 22 10 0.45 31537 Lactococcus phage c2 44 0 0.00 31544 Human adenovirus 16 58 15 0.26 31545 Human adenovirus 8 155 70 0.45 31547 Human papillomavirus type 20 8 7 0.88 31548 Human papillomavirus type 21 9 8 0.89 31553 Papillomavirus sylvilagi (STRAIN KANSAS) 8 6 0.75 31556 Cauliflower mosaic virus (STRAIN BBC) 6 4 0.67 31557 Cauliflower mosaic virus (STRAIN NY8153) 6 4 0.67 31565 Human rotavirus (group C / strain 88-220) 1 1 1.00 31566 Human rotavirus (group C / strain Belem) 1 1 1.00 31567 Human rotavirus (group C / strain Bristol) 11 10 0.91 31568 Human rotavirus (group C / strain Preston) 1 1 1.00 31569 Human rotavirus (serotype 2 / strain RV-5) 3 3 1.00 31570 Human rotavirus 1 strain RV4 2 2 1.00 31571 Rotavirus A human/A28/G10 1 1 1.00 31574 Human rotavirus (strain IGV-80-3) 1 1 1.00 31599 Tobacco yellow dwarf virus (strain Australia) 4 4 1.00 31600 Indian cassava mosaic virus 38 27 0.71 31605 Human parainfluenza virus 1 (C35) 2 0 0.00 31606 Human parainfluenza 1 virus (strain CI-14/83) 2 0 0.00 31607 Human parainfluenza 1 virus (strain CI-5/73) 2 0 0.00 31608 Simian virus 5 (isolate canine/CPI+) 1 1 1.00 31609 Simian virus 5 (isolate canine/CPI-) 1 1 1.00 31610 Simian virus 5 (isolate human/LN) 1 1 1.00 31613 Rabies virus strain Street 1 1 1.00 31617 Hantaan virus B-1 1 1 1.00 31620 Seoul virus R22 1 1 1.00 31631 Human coronavirus OC43 157 42 0.27 31634 Dengue virus 2 Thailand/16681/84 2 2 1.00 31635 Dengue virus 2 16681-PDK53 1 1 1.00 31636 Dengue virus 2 China/D2-04 1 1 1.00 31637 Dengue virus 2 Thailand/TH-36/1958 1 1 1.00 31638 Langat virus (strain TP21) 1 1 1.00 31639 Langat virus (strain Yelantsev) 1 1 1.00 31640 Louping ill virus (strain SB 526) 1 1 1.00 31641 Yellow fever virus 1899/81 1 1 1.00 31642 Hepatitis C virus (isolate HC-JT) 1 1 1.00 31643 Hepatitis C virus (isolate HCV-476) 1 1 1.00 31644 Hepatitis C virus (isolate HCV-KF) 1 1 1.00 31645 Hepatitis C virus (isolate Taiwan) 1 1 1.00 31656 Bovine viral diarrhea virus 1-SD1 1 1 1.00 31658 Cell fusing agent virus 26 4 0.15 31663 Influenza A virus (A/turkey/Bethlehem-Glilit/1492-B/1982(H1N1)) 2 2 1.00 31678 Human immunodeficiency virus type 1 (WMJ1 isolate) 1 1 1.00 31681 Human immunodeficiency virus type 2 (isolate ST/24.1C#2) 1 1 1.00 31699 Ockelbo virus 2 2 1.00 31702 Mengo encephalomyocarditis virus (strain 37A) 1 1 1.00 31705 Echovirus 11 (strain Gregory) 1 1 1.00 31706 Human hepatitis A virus Hu/Georgia/GA76/1976 1 1 1.00 31707 Simian hepatitis A virus Macaca/Philippines/CY-145/1988 1 1 1.00 31708 Human rhinovirus 16 4 4 1.00 31715 Bean-pod mottle virus (strain Kentucky G7) 2 2 1.00 31716 Cowpea severe mosaic virus (strain DG) 2 2 1.00 31728 Barley yellow mosaic virus (German isolate) 2 2 1.00 31729 Barley yellow mosaic virus (Japanese strain II-1) 2 2 1.00 31731 Papaya ringspot virus (strain P / mutant HA) 2 2 1.00 31736 Pea seed-borne mosaic virus (strain DPD1) 2 2 1.00 31737 Pepper mottle virus (California isolate) 2 2 1.00 31739 Potato virus Y strain Hungarian 2 2 1.00 31745 Pepper mild mottle virus (strain Spain) 3 1 0.33 31746 Tobacco mosaic virus strain Korean 3 1 0.33 31749 Obuda pepper virus 3 1 0.33 31757 Mycobacterium phage L5 85 3 0.04 31762 Hepatitis delta virus (ISOLATE D380) 2 2 1.00 31763 Hepatitis delta virus (ISOLATE LEBANON-1) 2 2 1.00 31764 Hepatitis delta virus (isolate woodchuck) 2 2 1.00 31766 Hepatitis E virus (isolate rhesus) 1 1 1.00 31767 Hepatitis E virus (strain Burma) 3 2 0.67 31768 Hepatitis E virus (strain Mexico) 3 2 0.67 31769 Hepatitis E virus (strain Myanmar) 3 2 0.67 31770 Shallot virus X 13 6 0.46 31915 Human enterovirus 70 (strain J670/71) 1 1 1.00 31964 Clavibacter michiganensis subsp. sepedonicus 3089 759 0.25 32049 Synechococcus sp. PCC 7002 3274 822 0.25 32051 Synechococcus sp. WH 7803 2540 639 0.25 32604 Human herpesvirus 6B 143 25 0.17 33722 Human rotavirus (serotype G / strain RK9) 1 1 1.00 33727 Marburg virus - Musoke, Kenya, 1980 7 7 1.00 33728 Lake Victoria marburgvirus - Popp 7 7 1.00 33729 Mumps virus (strain SBL) 5 3 0.60 33730 Simian virus 5 (strain 21004-WR) 1 1 1.00 33734 Feline infectious peritonitis virus (strain 79-1146) 10 6 0.60 33741 Dengue virus 1 Singapore/S275/1990 1 1 1.00 33762 Parsnip yellow fleck virus (isolate P-121) 1 1 1.00 33774 Hepatitis E virus (strain Pakistan) 3 2 0.67 33903 Streptomyces avermitilis 7720 1593 0.21 34765 Oikopleura dioica 29029 5734 0.20 35128 Thalassiosira pseudonana 11819 2304 0.19 35297 Striped Jack nervous necrosis virus 5 3 0.60 35300 Human astrovirus 4 72 3 0.04 35304 Bunyamwera virus 21 12 0.57 35339 LuIII virus 2 1 0.50 35740 Human astrovirus 3 51 1 0.02 35741 Human astrovirus 5 28 3 0.11 36329 Plasmodium falciparum 3D7 5359 1695 0.32 36345 Herpes simplex virus 1 strain R-15 20 2 0.10 36346 Herpes simplex virus (type 1 / strain R19) 1 1 1.00 36351 Human herpesvirus 6 strain Z29 97 48 0.49 36375 Human immunodeficiency virus type 1 (KB-1 isolate) 1 1 1.00 36376 Human immunodeficiency virus type 1 (NIT-A isolate) 1 1 1.00 36382 Venezuelan equine encephalitis virus (strain 3880) 2 2 1.00 36383 Venezuelan equine encephalitis virus (strain Everglades FE3-7C) 1 1 1.00 36384 Venezuelan equine encephalitis virus (strain Mena II) 3 3 1.00 36385 Venezuelan equine encephalitis virus (strain P676) 2 2 1.00 36386 Louping ill virus (strain 31) 1 1 1.00 36387 Louping ill virus (strain K) 1 1 1.00 36388 Louping ill virus (strain Negishi 3248/49/P10) 1 1 1.00 36389 Louping ill virus (strain Norway) 1 1 1.00 36394 Rice stripe virus (isolate T) 7 6 0.86 36396 Turnip mosaic virus (strain Quebec) 2 2 1.00 36402 Apple stem grooving virus (strain P-209) 2 1 0.50 36404 Human coxsackievirus A24 (strain EH24/70) 1 1 1.00 36406 San Miguel sea lion virus 1 3 2 0.67 36408 Measles virus strain AIK-C 14 8 0.57 36409 Rinderpest virus (strain RBOK) 8 5 0.63 36412 Human parainfluenza 1 virus (strains A1426 / 86-315 / 62M-753) 2 2 1.00 36413 Tomato spotted wilt virus (strain Brazilian BR-01) 5 3 0.60 36418 Influenza A virus (A/chicken/Brescia/1902(H7N7)) 19 15 0.79 36449 Tomato mottle virus - [Florida B1] 6 5 0.83 36870 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 612 358 0.58 37106 Herpes simplex virus (type 1 / strain CVG-2) 1 1 1.00 37107 Herpes simplex virus (type 1 / strain MGH-10) 1 1 1.00 37111 Human papillomavirus type 28 7 6 0.86 37112 Human papillomavirus type 29 7 6 0.86 37114 Human papillomavirus type 55 11 7 0.64 37115 Human papillomavirus type 59 52 33 0.63 37116 Human papillomavirus type 61 9 8 0.89 37118 Human papillomavirus type 64 1 1 1.00 37119 Human papillomavirus type 66 178 137 0.77 37120 Human papillomavirus type 67 45 39 0.87 37121 Human papillomavirus type 69 8 6 0.75 37122 Human papillomavirus type 6a 8 6 0.75 37129 Southampton virus (serotype 3) 3 2 0.67 37130 Human astrovirus 6 20 1 0.05 37132 Rabies virus Ontario fox 35 35 1.00 37136 Human rotavirus (strain MC35) 2 2 1.00 37137 Simian rotavirus A/SA11-both 12 11 0.92 37139 Tomato yellow leaf curl virus - [Murcia] 6 5 0.83 37206 Helicoverpa armigera stunt virus 3 2 0.67 37954 Human papillomavirus type 22 8 7 0.88 37955 Human papillomavirus type 23 8 7 0.88 37956 Human papillomavirus type 24 10 9 0.90 37957 Human papillomavirus type 36 11 10 0.91 37958 Human papillomavirus type 37 8 7 0.88 37959 Human papillomavirus type 38 56 55 0.98 38062 Cassava vein mosaic virus 8 3 0.38 38766 Lagos bat virus 78 78 1.00 38767 Duvenhage virus 27 27 1.00 38950 Human astrovirus 7 8 1 0.13 38973 Influenza A virus (A/Memphis/4/1973(H3N2)) 1 1 1.00 38988 Influenza B virus (strain B/finland/145/90) 1 1 1.00 38990 Influenza B virus (strain B/finland/146/90) 1 1 1.00 38991 Influenza B virus (strain B/finland/147/90) 1 1 1.00 38992 Influenza B virus (strain B/finland/148/90) 1 1 1.00 38993 Influenza B virus (strain B/finland/149/90) 1 1 1.00 38994 Influenza B virus (strain B/finland/150/90) 1 1 1.00 38995 Influenza B virus (strain B/finland/151/90) 1 1 1.00 38996 Influenza B virus (strain B/finland/24/85) 1 1 1.00 38997 Influenza B virus (strain B/finland/56/88) 1 1 1.00 38998 Puumala virus (strain berkel) 2 2 1.00 38999 Puumala virus (strain evo/12cg/93) 1 1 1.00 39000 Puumala virus (strain k27) 2 2 1.00 39001 Puumala virus (strain p360) 2 2 1.00 39002 Puumala virus (strain sotkamo/v-2969/81) 3 2 0.67 39003 Puumala virus (strain udmurtia/894cg/91) 2 2 1.00 39005 Rabies virus Ontario skunk 1 1 1.00 39008 Tick-borne powassan virus (strain lb) 1 1 1.00 39011 Human rotavirus serotype 1 / strain a91a 1 1 1.00 39012 Human rotavirus (serotype g1 / strain k8) 4 4 1.00 39013 Human rotavirus AU-1 12 11 0.92 39015 Human T-cell lymphotropic virus type 1 (african isolate) 3 3 1.00 39016 Human T-cell lymphotropic virus type 1 (north american isolate) 1 1 1.00 39068 Simian retrovirus 2 78 73 0.94 39457 Human papillomavirus type 70 19 12 0.63 39720 Walleye dermal sarcoma virus 39 6 0.15 40537 Bovine papillomavirus 5 6 6 1.00 40538 Human papillomavirus type 48 7 6 0.86 40539 Human papillomavirus type 50 7 6 0.86 40540 Human papillomavirus type 60 7 6 0.86 40631 Enterobacteria phage N15 66 4 0.06 41431 Cyanothece sp. PCC 8801 4349 918 0.21 41514 Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- 4500 1531 0.34 41952 Arctic ground squirrel hepatitis B virus 7 6 0.86 42007 Chinese Rape Mosaic Virus 8 2 0.25 42567 Rotavirus G9 290 263 0.91 42764 Oliveros virus 4 4 1.00 43151 Anopheles darlingi 11653 2956 0.25 43358 Human astrovirus 8 51 3 0.06 43989 Cyanothece sp. ATCC 51142 5270 1038 0.20 44130 Human rhinovirus 3 10 7 0.70 44158 Aura virus 3 2 0.67 44689 Dictyostelium discoideum 13113 4445 0.34 44755 New York virus 2 2 1.00 45219 Guanarito virus 77 57 0.74 45221 Latino virus 8 6 0.75 45222 Parana virus 8 8 1.00 45223 Tamiami virus 9 7 0.78 45237 Helminthosporium victoriae virus 190S 2 1 0.50 45240 Human papillomavirus type 68 50 22 0.44 45351 Nematostella vectensis 24934 6788 0.27 45410 Hepatitis B virus adw4/Brazil/isolate w4b 7 6 0.86 45418 Rabies virus vnukovo-32 1 1 1.00 45659 Human adenovirus 3 480 350 0.73 45709 Sabia virus 4 4 1.00 46014 Acholeplasma phage L2 14 2 0.14 46015 Autographa californica nucleopolyhedrovirus 200 34 0.17 46245 Drosophila pseudoobscura pseudoobscura 16333 4419 0.27 46919 Whitewater Arroyo virus 30 23 0.77 46922 Human adenovirus 17 57 17 0.30 49267 Tomato pseudo-curly top virus 6 4 0.67 49891 Pirital virus 55 47 0.85 51033 Human papillomavirus type 73 11 10 0.91 53182 Feline foamy virus 20 11 0.55 54388 Salmonella enterica subsp. enterica serovar Paratyphi A 4130 1646 0.40 55096 Ippy virus 6 5 0.83 56780 Syntrophus aciditrophicus SB 3145 776 0.25 57119 Bean yellow dwarf virus 9 8 0.89 57278 Human herpesvirus 7 strain JI 102 31 0.30 57279 Human herpesvirus 7 strain MUK 1 1 1.00 58103 Leishmania RNA virus 1 - 1 3 1 0.33 59300 Getah virus 30 22 0.73 59303 Sagiyama virus 8 5 0.63 59374 Fibrobacter succinogenes subsp. succinogenes S85 3807 728 0.19 59380 Rice yellow stunt virus 14 7 0.50 59463 Myotis lucifugus 20849 8165 0.39 59748 Candidatus Phytoplasma australiense 675 230 0.34 59919 Prochlorococcus marinus subsp. pastoris str. CCMP1986 1946 485 0.25 59920 Prochlorococcus marinus str. NATL2A 2149 495 0.23 59922 Prochlorococcus marinus str. MIT 9303 2993 590 0.20 60480 Shewanella sp. MR-4 3919 1348 0.34 60481 Shewanella sp. MR-7 4004 1344 0.34 61853 Nomascus leucogenys 23118 8897 0.38 62478 Influenza A virus (A/Kitakyushu/93(H3N2)) 6 5 0.83 62928 Azoarcus sp. BH72 3989 1291 0.32 62977 Acinetobacter sp. ADP1 3331 1011 0.30 63186 Zobellia galactanivorans 4713 991 0.21 63737 Nostoc punctiforme PCC 73102 6607 1365 0.21 64091 Halobacterium sp. NRC-1 2426 527 0.22 64141 Porcine enterovirus 9 4 4 1.00 64187 Xanthomonas oryzae pv. oryzae 4611 1126 0.24 64471 Synechococcus sp. CC9311 2884 650 0.23 65393 Cyanothece sp. PCC 7424 5657 1109 0.20 65699 Neisseria meningitidis serogroup A 1903 644 0.34 65743 Blackcurrant reversion virus 23 23 1.00 66084 Wolbachia sp. wRi 1039 364 0.35 66366 Tomato yellow leaf curl virus - Israel 63 46 0.73 66692 Bacillus clausii KSM-K16 4082 1240 0.30 67605 Human torovirus 2 1 0.50 69014 Thermococcus kodakarensis KOD1 2309 493 0.21 69153 Human enterovirus 71 (strain BRCR) 1 1 1.00 69159 Human coxsackievirus A16 (strain G-10) 1 1 1.00 69162 Human herpesvirus 5 (strain 1042) 1 1 1.00 69163 Human herpesvirus 5 (strain 2387) 1 1 1.00 69164 Human herpesvirus 5 (strain 4654) 1 1 1.00 69165 Human herpesvirus 5 (strain 5040) 1 1 1.00 69166 Human herpesvirus 5 (strain 5035) 1 1 1.00 69167 Human herpesvirus 5 (strain 5160) 1 1 1.00 69168 Human herpesvirus 5 (strain 5508) 1 1 1.00 69169 Human herpesvirus 5 strain PT 1 1 1.00 69293 Gasterosteus aculeatus 28017 10495 0.37 70146 Measles virus strain Edmonston-B 2 2 1.00 70147 Measles virus strain Leningrad-16 1 1 1.00 70148 Measles virus strain Philadelphia-26 1 1 1.00 70149 Measles virus strain Edmonston-Zagreb 10 5 0.50 70448 Ostreococcus tauri 8029 1645 0.20 70601 Pyrococcus horikoshii OT3 2082 457 0.22 70733 Tick-borne encephalitis virus (strain HYPR) 1 1 1.00 70794 Ovine astrovirus 3 3 1.00 70863 Shewanella oneidensis 4590 1343 0.29 71421 Haemophilus influenzae Rd KW20 1709 936 0.55 72003 Diatraea saccharalis densovirus 6 3 0.50 73239 Plasmodium yoelii yoelii 7838 997 0.13 73472 Apple chlorotic leaf spot virus (isolate APPLE) 3 1 0.33 73473 Apple chlorotic leaf spot virus (isolate PLUM P863) 3 1 0.33 73475 Chicken anemia virus Cuxhaven-1/Germany 3 2 0.67 73476 Chicken anemia virus 82-2/Japan 3 2 0.67 73477 Chicken anemia virus 26P4/USA 4 2 0.50 73478 Chicken anemia virus CIA-1/USA 3 2 0.67 73481 Foot-and-mouth disease virus A22/550/Azerbaijan/65 1 1 1.00 73482 Foot-and-mouth disease virus (strain O1) 6 3 0.50 73483 Human herpesvirus 5 (strain 119) 1 1 1.00 73484 Human immunodeficiency virus type 2 (isolate KR) 9 9 1.00 73487 Porcine parvovirus Kresse 4 1 0.25 73488 Potato virus x (strain HB) 5 4 0.80 73495 Orf virus NZ7 3 2 0.67 74109 Photobacterium profundum 5354 1695 0.32 74546 Prochlorococcus marinus str. MIT 9312 1963 493 0.25 74547 Prochlorococcus marinus str. MIT 9313 2833 584 0.21 75379 Thiomonas intermedia K12 3140 1002 0.32 75723 Enterobacteria phage MX1 4 2 0.50 76114 Aromatoleum aromaticum EbN1 4483 1076 0.24 76869 Pseudomonas putida GB-1 5404 1815 0.34 77856 Beak and feather disease virus 442 240 0.54 78245 Xanthobacter autotrophicus Py2 4973 1271 0.26 78540 Sleeping disease virus 44 20 0.45 79691 Human papillomavirus RTRX7 7 6 0.86 79692 Human respiratory syncytial virus B1 11 10 0.91 79694 Human rotavirus (serotype P13 / strain 1845) 1 1 1.00 79700 Rat cytomegalovirus Maastricht 167 15 0.09 79899 Igbo Ora virus 2 2 1.00 79923 Clonorchis sinensis 11242 2266 0.20 79929 Methanothermobacter marburgensis str. Marburg 1756 389 0.22 81824 Monosiga brevicollis 9271 2013 0.22 81972 Arabidopsis lyrata subsp. lyrata 32625 6728 0.21 82658 Lordsdale virus 54 2 0.04 82659 Sapporo virus-Manchester 3 2 0.67 82829 Epstein-barr virus strain p3hr-1 2 1 0.50 82830 Epstein-barr virus strain ag876 75 45 0.60 82831 Equid herpesvirus type 2 strain 86/87 77 39 0.51 82834 Human immunodeficiency virus type 1 lw12.3 isolate 7 7 1.00 83333 Escherichia coli K-12 4475 2482 0.55 83334 Escherichia coli O157:H7 6669 2260 0.34 83555 Chlamydophila abortus 1013 404 0.40 83557 Chlamydophila caviae 1015 349 0.34 83558 Chlamydia pneumoniae 1724 483 0.28 83560 Chlamydia muridarum 916 359 0.39 84588 Synechococcus sp. WH 8102 2519 615 0.24 84589 Salmon pancreas disease virus 143 83 0.58 84980 Desulfotalea psychrophila 3233 947 0.29 85617 Vesicular exanthema of swine virus A48 4 2 0.50 85618 Ateline herpesvirus 3 71 17 0.24 85643 Thauera sp. MZ1T 3927 1205 0.31 85708 Porcine circovirus 2 1726 1027 0.60 85962 Helicobacter pylori 26695 1557 541 0.35 85963 Helicobacter pylori J99 1488 543 0.36 88036 Selaginella moellendorffii 33282 9427 0.28 88776 Influenza A virus (A/Brevig Mission/1/1918(H1N1)) 11 9 0.82 90370 Salmonella enterica subsp. enterica serovar Typhi 5374 1915 0.36 90371 Salmonella enterica subsp. enterica serovar Typhimurium 6097 2171 0.36 92829 Xanthomonas axonopodis pv. citri 4381 1295 0.30 93059 Prochlorococcus marinus str. MIT 9211 1857 483 0.26 93060 Prochlorococcus marinus str. MIT 9215 1985 477 0.24 93061 Staphylococcus aureus subsp. aureus NCTC 8325 2891 898 0.31 93062 Staphylococcus aureus subsp. aureus COL 2681 920 0.34 93838 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) 11 10 0.91 94122 Shewanella sp. ANA-3 4346 1419 0.33 96561 Desulfococcus oleovorans Hxd3 3258 792 0.24 98827 Influenza B virus (B/Memphis/3/89) 11 6 0.55 98832 Influenza B virus (B/Memphis/12/97) 11 7 0.64 98845 Influenza B virus (B/Panama/45/90) 7 5 0.71 99883 Tetraodon nigroviridis 28154 8698 0.31 100673 Influenza C virus (C/Johannesburg/1/66) 8 5 0.63 100834 Influenza A virus (A/Chicken/Hong Kong/220/97 (H5N1)) 10 9 0.90 100880 Northern cereal mosaic virus 17 5 0.29 101510 Rhodococcus jostii RHA1 9093 1577 0.17 103603 Snakehead virus 6 5 0.83 103690 Nostoc sp. PCC 7120 6160 1325 0.22 103900 Barley mild mosaic virus (strain Na1) 2 2 1.00 103902 Coxsackievirus B1 (strain Japan) 1 1 1.00 103903 Coxsackievirus B3 (strain Nancy) 1 1 1.00 103904 Coxsackievirus B3 (strain Woodruff) 1 1 1.00 103905 Coxsackievirus B4 (strain E2) 1 1 1.00 103906 Coxsackievirus B4 (strain JVB / Benschoten / New York/51) 1 1 1.00 103907 Coxsackievirus B5 (strain Peterborough / 1954/UK/85) 1 1 1.00 103908 Echovirus 1 (strain Farouk / ATCC VR-1038) 1 1 1.00 103909 Echovirus 12 (strain Travis) 1 1 1.00 103910 Echovirus 16 (strain Harrington) 1 1 1.00 103911 Echovirus 22 (strain Harris) 1 1 1.00 103913 Echovirus 6 strain Charles 1 1 1.00 103914 Echovirus 9 (strain Barty) 1 1 1.00 103915 Echovirus 9 (strain Hill) 1 1 1.00 103921 Herpes simplex virus (type 2 / strain B4327UR) 1 1 1.00 103922 Human enterovirus 71 (strain 7423/MS/87) 1 1 1.00 103926 Peanut mottle virus (strain M) 3 2 0.67 103927 Plum pox virus SK 68 2 2 1.00 103929 Rabies virus strain Pasteur vaccin 5 5 1.00 103931 Soybean mosaic virus G2 2 2 1.00 106370 Frankia sp. CcI3 4448 808 0.18 107411 Influenza B virus (B/Ibaraki/2/85) 6 3 0.50 107412 Influenza B virus (B/Lee/40) 30 18 0.60 107417 Influenza B virus (B/Singapore/222/79) 10 6 0.60 107806 Buchnera aphidicola str. APS (Acyrthosiphon pisum) 574 379 0.66 109049 Influenza A virus (A/Niigata/137/96 (H3N2)) 1 1 1.00 110662 Synechococcus sp. CC9605 2634 596 0.23 113370 Spodoptera frugiperda ascovirus 1a 149 9 0.06 114102 Frog adenovirus 1 23 5 0.22 114430 Ovine adenovirus 7 31 6 0.19 114615 Bradyrhizobium sp. ORS 278 6711 1755 0.26 114921 Beet mosaic virus 11 10 0.91 117128 Zucchini yellow mosaic virus (strain California) 2 2 1.00 117129 Zucchini yellow mosaic virus (strain Reunion Island) 2 2 1.00 117130 Zucchini yellow mosaic virus (strain Singapore) 2 2 1.00 117131 Lettuce mosaic virus (strain E) 2 2 1.00 117132 Lettuce mosaic virus (strain 0 / French isolate) 2 2 1.00 117138 Brome streak virus (strain 11-Cal) 1 1 1.00 121224 Pediculus humanus corporis 10847 3312 0.31 121791 Nipah virus 89 20 0.22 122961 HPeV 5 strain CT86-6760 1 1 1.00 122962 Echovirus 23 strain Williamson 1 1 1.00 123214 Persephonella marina EX-H1 2051 631 0.31 123735 Tomato yellow leaf curl Sardinia virus 150 116 0.77 126070 Columbid circovirus 71 31 0.44 126740 Thermotoga sp. RQ2 1897 623 0.33 126793 Plasmodium vivax SaI-1 5393 971 0.18 126794 Vaccinia virus Ankara 293 60 0.20 126796 Thogoto virus (isolate SiAr 126) 7 3 0.43 127957 Influenza C virus (C/Nara/2/85) 16 7 0.44 127958 Influenza C virus (C/Yamagata/4/88) 1 1 1.00 128947 Zaire ebolavirus - Gabon (1994-1997) 5 5 1.00 128948 Sudan ebolavirus - Boniface (1976) 3 3 1.00 128949 Sudan ebolavirus - Maleo (1979) 3 3 1.00 128951 Zaire ebolavirus - Zaire (1995) 10 9 0.90 128952 Ebola virus - Mayinga, Zaire, 1976 9 9 1.00 128999 Tai Forest virus - Cote d'Ivoire, Cote d'Ivoire, 1994 2 2 1.00 129000 Zaire ebolavirus - Eckron (Zaire, 1976) 2 2 1.00 129003 Reston ebolavirus - Reston 33 18 0.55 129004 Reston ebolavirus - Siena/Philippine-92 2 2 1.00 129724 Human papillomavirus type 82 20 13 0.65 130763 Influenza A virus (A/Hong Kong/156/97(H5N1)) 12 11 0.92 132475 Yaba-like disease virus 150 16 0.11 132484 Measles virus strain Moraten 8 4 0.50 132487 Measles virus strain Schwarz 8 4 0.50 132504 Influenza A virus (A/X-31(H3N2)) 15 11 0.73 137722 Azospirillum sp. B510 6092 1873 0.31 138119 Desulfitobacterium hafniense Y51 5022 1360 0.27 138309 Tobacco mosaic virus strain B395A 3 1 0.33 138310 Tobacco mosaic virus strain Rakkyo 3 1 0.33 138311 Tomato mosaic virus (strain Kazakh K1) 3 1 0.33 138312 Tomato mosaic virus (strain Kazakh K2) 3 1 0.33 138314 Tomato mosaic virus (strain S-1) 3 1 0.33 138661 Odontoglossum ringspot virus (isolate Korean Cy) 5 2 0.40 138662 Odontoglossum ringspot virus (isolate Singapore 1) 4 1 0.25 138663 Pepper mild mottle virus (strain Japan) 3 1 0.33 142661 Canary circovirus 3 2 0.67 142804 Rice dwarf virus (isolate Fujian) 12 10 0.83 144752 Allpahuayo virus 6 6 1.00 145481 Physcomitrella patens subsp. patens 34927 5153 0.15 145579 Bdellovibrio phage phiMH2K 11 5 0.45 146032 Goose circovirus 48 15 0.31 146891 Prochlorococcus marinus str. AS9601 1921 475 0.25 150340 Vibrio sp. Ex25 5352 1859 0.35 152794 Corynebacterium efficiens 2955 725 0.25 155892 Caulobacter vibrioides 3792 1099 0.29 156889 Magnetococcus sp. MC-1 3594 1046 0.29 157898 Sulfolobus islandicus rod-shaped virus 1 77 8 0.10 158878 Staphylococcus aureus subsp. aureus Mu50 2716 959 0.35 158879 Staphylococcus aureus subsp. aureus N315 2581 955 0.37 159087 Dechloromonas aromatica RCB 4155 1364 0.33 160488 Pseudomonas putida KT2440 5313 1748 0.33 160491 Streptococcus pyogenes str. Manfredo 1736 563 0.32 163164 Wolbachia endosymbiont of Drosophila melanogaster 1180 372 0.32 164546 Cupriavidus taiwanensis 5871 1761 0.30 164756 Mycobacterium sp. MCS 5591 1035 0.19 164757 Mycobacterium sp. JLS 5697 1060 0.19 167539 Prochlorococcus marinus subsp. marinus str. CCMP1375 1882 492 0.26 167542 Prochlorococcus marinus str. MIT 9515 1901 476 0.25 167546 Prochlorococcus marinus str. MIT 9301 1906 482 0.25 167555 Prochlorococcus marinus str. NATL1A 2180 497 0.23 167879 Colwellia psychrerythraea 34H 4872 2960 0.61 171101 Streptococcus pneumoniae R6 2029 654 0.32 173976 Cycas necrotic stunt virus 4 3 0.75 175814 Cestrum yellow leaf curling virus 7 3 0.43 176279 Staphylococcus epidermidis RP62A 2492 811 0.33 176280 Staphylococcus epidermidis ATCC 12228 2462 825 0.34 176283 Echovirus 5 (strain Noyce) 1 1 1.00 176284 Echovirus 30 (strain Bastianni) 1 1 1.00 176299 Agrobacterium tumefaciens str. C58 5358 1662 0.31 176652 Invertebrate iridescent virus 6 469 47 0.10 176674 Influenza A virus (A/Duck/Hong Kong/2986.1/2000(H5N1)) 11 10 0.91 177416 Francisella tularensis subsp. tularensis SCHU S4 1528 545 0.36 177437 Desulfobacterium autotrophicum HRM2 4846 1379 0.28 178306 Pyrobaculum aerophilum str. IM2 2590 433 0.17 183190 Xylella fastidiosa Temecula1 2007 663 0.33 184922 Giardia lamblia ATCC 50803 7156 598 0.08 185783 Golden shiner reovirus 12 8 0.67 185793 Tomato yellow leaf curl China virus 123 97 0.79 185959 Spiroplasma phage 1-C74 13 10 0.77 186460 Influenza A virus (A/swine/New Jersey/11/1976(H1N1)) 2 2 1.00 186497 Pyrococcus furiosus DSM 3638 2050 484 0.24 186769 Cryphonectria parasitica mitovirus 1-NB631 1 1 1.00 186772 Saccharomyces 20S RNA narnavirus 1 1 1.00 187272 Alkalilimnicola ehrlichii MLHE-1 2862 980 0.34 187420 Methanothermobacter thermautotrophicus str. Delta H 1872 419 0.22 188937 Methanosarcina acetivorans C2A 4468 776 0.17 189518 Leptospira interrogans serovar Lai str. 56601 3676 799 0.22 189918 Mycobacterium sp. KMS 5894 1078 0.18 190192 Methanopyrus kandleri AV19 1688 323 0.19 190239 Calicivirus strain NB 8 2 0.25 190304 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 2046 600 0.29 191547 Beet ringspot virus 3 2 0.67 192848 Bear Canyon virus 17 15 0.88 192952 Methanosarcina mazei Go1 3304 635 0.19 193567 Streptococcus pyogenes SSI-1 1852 575 0.31 194966 Enterobacteria phage SP6 65 0 0.00 195099 Campylobacter jejuni RM1221 1836 596 0.32 195103 Clostridium perfringens ATCC 13124 2873 794 0.28 196162 Nocardioides sp. JS614 4905 1044 0.21 196398 Southern cowpea mosaic virus 7 5 0.71 196426 Influenza A virus (A/Chicken/Hong Kong/YU562/01 (H5N1)) 11 10 0.91 196428 Influenza A virus (A/Chicken/Hong Kong/FY150/01 (H5N1)) 11 10 0.91 196430 Influenza A virus (A/Silky Chicken/Hong Kong/SF189/01 (H5N1)) 11 10 0.91 196434 Influenza A virus (A/Chicken/Hong Kong/715.5/01 (H5N1)) 11 10 0.91 196600 Vibrio vulnificus YJ016 4990 1599 0.32 196620 Staphylococcus aureus subsp. aureus MW2 2660 928 0.35 197221 Thermosynechococcus elongatus BP-1 2451 699 0.29 198599 Saccharomyces 23S RNA narnavirus 1 1 1.00 198628 Dickeya dadantii 3937 4532 1565 0.35 198804 Buchnera aphidicola str. Sg (Schizaphis graminum) 562 376 0.67 203119 Clostridium thermocellum ATCC 27405 3105 750 0.24 203120 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 2002 625 0.31 203122 Saccharophagus degradans 2-40 4000 1241 0.31 203123 Oenococcus oeni PSU-1 1687 555 0.33 203124 Trichodesmium erythraeum IMS101 4354 839 0.19 203224 Influenza C virus (C/California/78) 9 5 0.56 203225 Influenza C virus (C/Hyogo/1/83) 5 4 0.80 203229 Influenza C virus (C/Mississippi/80) 11 7 0.64 203231 Influenza C virus (C/pig/Beijing/115/81) 10 5 0.50 203232 Influenza C virus (C/Nara/82) 16 7 0.44 203233 Influenza C virus (C/Kyoto/41/82) 10 5 0.50 203267 Tropheryma whipplei str. Twist 805 290 0.36 203907 Candidatus Blochmannia floridanus 589 347 0.59 204536 Sulfurihydrogenibium azorense Az-Fu1 1708 555 0.32 204669 Candidatus Koribacter versatilis Ellin345 4771 1176 0.25 204722 Brucella suis 1330 3282 1028 0.31 204773 Herminiimonas arsenicoxydans 3286 1074 0.33 205913 Bifidobacterium longum DJO10A 1980 552 0.28 205914 Haemophilus somnus 129PT 1793 697 0.39 205918 Pseudomonas syringae pv. syringae B728a 5072 1676 0.33 205920 Ehrlichia chaffeensis str. Arkansas 1100 361 0.33 205922 Pseudomonas fluorescens Pf0-1 5714 1866 0.33 206672 Bifidobacterium longum NCC2705 1725 548 0.32 207559 Desulfovibrio alaskensis G20 3220 983 0.31 208899 Cupixi virus 4 4 1.00 208963 Pseudomonas aeruginosa UCBPP-PA14 5886 1892 0.32 208964 Pseudomonas aeruginosa PAO1 5577 1973 0.35 211044 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) 33 28 0.85 211977 Aravan virus 6 6 1.00 212035 Acanthamoeba polyphaga mimivirus 2144 307 0.14 212042 Anaplasma phagocytophilum HZ 1330 418 0.31 214684 Cryptococcus neoformans var. neoformans JEC21 6436 1905 0.30 215689 Erwinia sp. Ejp617 3632 1278 0.35 216389 Dehalococcoides sp. BAV1 1370 390 0.28 216466 Streptococcus agalactiae serogroup V 2105 656 0.31 216495 Streptococcus agalactiae serogroup III 2002 670 0.33 216591 Burkholderia cenocepacia J2315 6993 2036 0.29 216592 Escherichia coli 042 4884 1719 0.35 216594 Mycobacterium marinum M 5424 1034 0.19 216595 Pseudomonas fluorescens SBW25 6435 2060 0.32 216596 Rhizobium leguminosarum bv. viciae 3841 7110 2384 0.34 216597 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 4433 1684 0.38 217166 Influenza C virus (C/Yamagata/64) 5 5 1.00 217828 Influenza A virus (A/equine/Sao Paulo/1/76(H7N7)) 1 1 1.00 217829 Influenza A virus (A/equine/Switzerland/137/72(H7N7)) 1 1 1.00 217831 Influenza A virus (A/equine/Newmarket/1/77(H7N7)) 5 5 1.00 217834 Influenza A virus (A/equine/Detroit/1/64(H7N7)) 1 1 1.00 217835 Influenza A virus (A/equine/Cambridge/1/73(H7N7)) 1 1 1.00 217836 Influenza A virus (A/equine/C.Detroit/1/64(H7N7)) 1 1 1.00 217837 Influenza A virus (A/equine/Cambridge/1/63(H7N7)) 1 1 1.00 217992 Escherichia coli O6 5336 1901 0.36 218493 Salmonella bongori NCTC 12419 3853 1560 0.40 218494 Streptococcus suis P1/7 1814 595 0.33 218495 Streptococcus uberis 0140J 1760 604 0.34 218496 Tropheryma whipplei TW08/27 781 286 0.37 219688 Mink astrovirus 17 3 0.18 220664 Pseudomonas fluorescens Pf-5 6108 3299 0.54 220668 Lactobacillus plantarum WCFS1 3088 944 0.31 221016 Influenza A virus (A/Queensland/7/70(H3N2)) 10 9 0.90 221109 Oceanobacillus iheyensis HTE831 3490 982 0.28 221538 Tomato yellow leaf curl Sardinia virus-[Spain2] 6 5 0.83 221988 Mannheimia succiniciproducens MBEL55E 2367 834 0.35 222073 African cassava mosaic virus - [Nigeria] 8 6 0.75 222448 Bean golden yellow mosaic virus-[Puerto Rico] 7 5 0.71 222449 Bean golden yellow mosaic virus-[Puerto Rico-Japan] 2 0 0.00 222523 Bacillus cereus ATCC 10987 5834 1384 0.24 222891 Neorickettsia sennetsu str. Miyayama 932 303 0.33 222929 Coccidioides posadasii C735 delta SOWgp 7226 1848 0.26 223283 Pseudomonas syringae pv. tomato str. DC3000 5432 3043 0.56 223295 Mungbean yellow mosaic virus-Vigna 12 9 0.75 223303 Pepper huasteco yellow vein virus 23 20 0.87 223310 Potato yellow mosaic virus - [Venezuela] 7 6 0.86 223341 Tomato golden mosaic virus-Yellow vein 7 6 0.86 223353 Tomato leaf curl virus-[AU] 7 5 0.71 224324 Aquifex aeolicus VF5 1553 633 0.41 224325 Archaeoglobus fulgidus DSM 4304 2398 648 0.27 224914 Brucella melitensis bv. 1 str. 16M 4966 1745 0.35 224915 Buchnera aphidicola str. Bp (Baizongia pistaciae) 507 341 0.67 225849 Shewanella piezotolerans WP3 4923 1451 0.29 226186 Bacteroides thetaiotaomicron VPI-5482 4782 1182 0.25 226900 Bacillus cereus ATCC 14579 5255 1353 0.26 227321 Aspergillus nidulans FGSC A4 12699 3638 0.29 227859 SARS coronavirus 53 37 0.70 228400 Haemophilus somnus 2336 1972 716 0.36 228405 Hyphomonas neptunium ATCC 15444 3499 1459 0.42 228908 Nanoarchaeum equitans Kin4-M 536 145 0.27 229032 Porcine epidemic diarrhea virus (strain CV777) 7 7 1.00 230236 Porcine hemagglutinating encephalomyelitis virus (strain IAF-404) 8 6 0.75 230237 Porcine hemagglutinating encephalomyelitis virus (strain 67N) 8 6 0.75 230285 Influenza B virus (B/Bonn/43) 1 1 1.00 230286 Influenza B virus (B/USSR/100/83) 3 3 1.00 230407 Cryphonectria parasitica mycoreovirus-1 (9B21) 11 4 0.36 231417 Coxsackievirus A16 (strain Tainan/5079/98) 1 1 1.00 231473 Coxsackievirus B2 (strain Ohio-1) 1 1 1.00 231474 Coxsackievirus B6 (strain Schmitt) 1 1 1.00 232721 Acidovorax sp. JS42 4046 1192 0.29 233262 Bovine enteric coronavirus (strain 98TXSF-110-ENT) 12 8 0.67 233264 Bovine respiratory coronavirus (strain 98TXSF-110-LUN) 12 8 0.67 233412 Haemophilus ducreyi 35000HP 1694 628 0.37 234267 Candidatus Solibacter usitatus Ellin6076 7761 1630 0.21 234601 Sapovirus Mc10 2 2 1.00 234621 Rhodococcus erythropolis PR4 6424 1287 0.20 234826 Anaplasma marginale str. St. Maries 970 386 0.40 234831 Pseudoalteromonas sp. SM9913 3710 1245 0.34 235279 Helicobacter hepaticus ATCC 51449 1872 545 0.29 235909 Geobacillus kaustophilus HTA426 3516 930 0.26 237561 Candida albicans SC5314 9120 4473 0.49 237631 Ustilago maydis 521 6553 1755 0.27 237895 Cryptosporidium hominis 4380 802 0.18 240015 Acidobacterium capsulatum ATCC 51196 3363 879 0.26 240176 Coprinopsis cinerea okayama7#130 13346 2038 0.15 240292 Anabaena variabilis ATCC 29413 5643 1256 0.22 242231 Neisseria gonorrhoeae FA 1090 1963 601 0.31 242507 Magnaporthe oryzae 70-15 13295 2513 0.19 242619 Porphyromonas gingivalis W83 1864 499 0.27 243090 Rhodopirellula baltica SH 1 7271 923 0.13 243159 Acidithiobacillus ferrooxidans ATCC 23270 3120 789 0.25 243164 Dehalococcoides ethenogenes 195 1502 415 0.28 243231 Geobacter sulfurreducens PCA 3418 1074 0.31 243232 Methanocaldococcus jannaschii DSM 2661 1787 599 0.34 243233 Methylococcus capsulatus str. Bath 2925 1658 0.57 243243 Mycobacterium avium 104 5040 770 0.15 243265 Photorhabdus luminescens subsp. laumondii TTO1 4556 1337 0.29 243272 Mycoplasma arthritidis 158L3-1 631 213 0.34 243273 Mycoplasma genitalium G37 484 313 0.65 243275 Treponema denticola ATCC 35405 2753 653 0.24 243276 Treponema pallidum subsp. pallidum str. Nichols 1033 440 0.43 244589 Sulfolobus virus 1 34 7 0.21 246194 Carboxydothermus hydrogenoformans Z-2901 2615 681 0.26 246195 Dichelobacter nodosus VCS1703A 1273 499 0.39 246196 Mycobacterium smegmatis str. MC2 155 6641 1337 0.20 246197 Myxococcus xanthus DK 1622 7324 1456 0.20 246200 Ruegeria pomeroyi DSS-3 4247 1235 0.29 246343 Turkey astrovirus 2 288 3 0.01 247156 Nocardia farcinica IFM 10152 5943 1048 0.18 249583 Irkut virus 5 5 1.00 251221 Gloeobacter violaceus PCC 7421 4409 950 0.22 254945 Ehrlichia ruminantium str. Welgevonden 1123 409 0.36 255470 Dehalococcoides sp. CBDB1 1483 432 0.29 257310 Bordetella bronchiseptica RB50 4967 1608 0.32 257314 Lactobacillus johnsonii NCC 533 1809 629 0.35 257363 Rickettsia typhi str. Wilmington 836 412 0.49 258594 Rhodopseudomonas palustris CGA009 4811 1402 0.29 259536 Psychrobacter arcticus 273-4 2099 657 0.31 259564 Methanococcoides burtonii DSM 6242 2242 515 0.23 260717 Human papillomavirus type 94 23 19 0.83 260797 Heliothis virescens ascovirus 3e 179 7 0.04 261292 Nitrosomonas sp. Is79A3 3273 852 0.26 261991 Hepatitis delta virus (isolate US-2) 2 2 1.00 261992 Hepatitis delta virus (isolate TW2476) 2 2 1.00 261993 Hepatitis delta virus (isolate VnzD8624) 2 2 1.00 261994 Hepatitis delta virus (isolate VnzD8349) 2 2 1.00 261995 Hepatitis delta virus (isolate VnzD8375) 2 2 1.00 261996 Hepatitis delta virus (isolate Peru-1) 2 2 1.00 262177 Orgyia pseudotsugata MNPV 155 34 0.22 262398 Human herpesvirus 7 strain RK 1 1 1.00 262543 Exiguobacterium sibiricum 255-15 3006 892 0.30 262698 Brucella abortus bv. 1 str. 9-941 3077 985 0.32 262719 Mycoplasma hyopneumoniae J 671 234 0.35 262722 Mycoplasma hyopneumoniae 7448 694 232 0.33 262723 Mycoplasma synoviae 53 679 236 0.35 262724 Thermus thermophilus HB27 2200 594 0.27 262728 Haemophilus influenzae R2866 1793 707 0.39 262768 Onion yellows phytoplasma OY-M 730 217 0.30 263820 Picrophilus torridus DSM 9790 1535 386 0.25 264198 Ralstonia eutropha JMP134 6454 2002 0.31 264199 Streptococcus thermophilus LMG 18311 1585 542 0.34 264201 Candidatus Protochlamydia amoebophila UWE25 2024 476 0.24 264202 Chlamydophila felis Fe/C-56 1013 351 0.35 264462 Bdellovibrio bacteriovorus HD100 3583 875 0.24 264730 Pseudomonas syringae pv. phaseolicola 1448A 5045 2687 0.53 264731 Prevotella ruminicola 23 2761 698 0.25 264732 Moorella thermoacetica ATCC 39073 2451 711 0.29 265072 Methylobacillus flagellatus KT 2609 950 0.36 265311 Mesoplasma florum L1 683 276 0.40 265669 Listeria monocytogenes serotype 4b str. F2365 2818 1588 0.56 265871 Cowpox virus (strain GRI-90) 19 13 0.68 265872 Cowpox virus (Brighton Red) 17 14 0.82 266117 Rubrobacter xylanophilus DSM 9941 3127 785 0.25 266264 Cupriavidus metallidurans CH34 6480 1904 0.29 266265 Burkholderia xenovorans LB400 8592 2413 0.28 266779 Chelativorans sp. BNC1 4530 1250 0.28 266834 Sinorhizobium meliloti 1021 6169 2079 0.34 266835 Mesorhizobium loti MAFF303099 7255 1841 0.25 266940 Kineococcus radiotolerans SRS30216 4674 1136 0.24 267377 Methanococcus maripaludis S2 1722 436 0.25 267407 European mountain ash ringspot-associated virus 11 7 0.64 267608 Ralstonia solanacearum GMI1000 5022 2003 0.40 267671 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 3654 786 0.22 267747 Propionibacterium acnes KPA171202 2294 664 0.29 267748 Mycoplasma mobile 163K 628 234 0.37 268305 Bovine viral diarrhea virus 1-CP7 1 1 1.00 268331 Maize streak virus - E[Pat] 4 4 1.00 268343 Maize streak virus - [Raw] 4 4 1.00 268344 Maize streak virus - [Set] 4 4 1.00 268409 Maize streak virus - B[Tas] 5 4 0.80 268776 Miscanthus streak virus - [91] 5 4 0.80 268780 Panicum streak virus - [Kenya] 4 4 1.00 268781 Sugarcane streak virus - [Natal] 4 4 1.00 268789 Wheat dwarf virus - [Sweden] 4 4 1.00 268960 Beet curly top virus - California [Logan] 9 4 0.44 269084 Synechococcus elongatus PCC 6301 2555 713 0.28 269446 Rous sarcoma virus (strain Schmidt-Ruppin A) 5 3 0.60 269482 Burkholderia vietnamiensis G4 7410 1904 0.26 269483 Burkholderia sp. 383 7715 2210 0.29 269484 Ehrlichia canis str. Jake 921 360 0.39 269796 Rhodospirillum rubrum ATCC 11170 3835 1231 0.32 269797 Methanosarcina barkeri str. Fusaro 3616 658 0.18 269798 Cytophaga hutchinsonii ATCC 33406 3771 824 0.22 269799 Geobacter metallireducens GS-15 3467 1013 0.29 269800 Thermobifida fusca YX 3085 746 0.24 271065 Methylomicrobium alcaliphilum 4053 1104 0.27 271848 Burkholderia thailandensis E264 5563 1650 0.30 272557 Aeropyrum pernix K1 1701 383 0.23 272558 Bacillus halodurans C-125 4006 1152 0.29 272559 Bacteroides fragilis NCTC 9343 4234 1158 0.27 272563 Clostridium difficile 630 3784 1074 0.28 272564 Desulfitobacterium hafniense DCB-2 4852 1288 0.27 272568 Gluconacetobacter diazotrophicus PAl 5 5905 1519 0.26 272569 Haloarcula marismortui ATCC 43049 4237 769 0.18 272620 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 5126 1870 0.36 272621 Lactobacillus acidophilus NCFM 1859 636 0.34 272622 Lactococcus lactis subsp. cremoris SK11 2442 652 0.27 272623 Lactococcus lactis subsp. lactis Il1403 2225 665 0.30 272624 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 2949 886 0.30 272630 Methylobacterium extorquens AM1 6234 1452 0.23 272632 Mycoplasma mycoides subsp. mycoides SC str. PG1 978 404 0.41 272633 Mycoplasma penetrans HF-2 1028 317 0.31 272634 Mycoplasma pneumoniae M129 687 376 0.55 272635 Mycoplasma pulmonis UAB CTIP 778 267 0.34 272831 Neisseria meningitidis FAM18 1865 628 0.34 272843 Pasteurella multocida subsp. multocida str. Pm70 2015 864 0.43 272844 Pyrococcus abyssi GE5 1788 473 0.26 272942 Rhodobacter capsulatus SB 1003 3632 1100 0.30 272943 Rhodobacter sphaeroides 2.4.1 4244 1293 0.30 272944 Rickettsia conorii str. Malish 7 1372 455 0.33 272947 Rickettsia prowazekii str. Madrid E 835 459 0.55 273036 Staphylococcus aureus RF122 2513 861 0.34 273057 Sulfolobus solfataricus P2 2941 532 0.18 273063 Sulfolobus tokodaii str. 7 2805 498 0.18 273068 Thermoanaerobacter tengcongensis MB4 2545 724 0.28 273075 Thermoplasma acidophilum DSM 1728 1483 392 0.26 273116 Thermoplasma volcanium GSS1 1524 379 0.25 273119 Ureaplasma parvum serovar 3 str. ATCC 700970 611 260 0.43 277944 Human coronavirus NL63 401 154 0.38 278137 Mycobacterium sp. Spyr1 5225 965 0.18 278197 Pediococcus pentosaceus ATCC 25745 1755 599 0.34 279010 Bacillus licheniformis ATCC 14580 4676 1282 0.27 279238 Novosphingobium aromaticivorans DSM 12444 3917 981 0.25 279794 Influenza A virus (A/HK/212/03 (H5N1)) 11 10 0.91 279803 Influenza A virus (A/Ck/HK/96.1/02 (H5N1)) 11 10 0.91 279808 Staphylococcus haemolyticus JCSC1435 2640 803 0.30 281090 Leifsonia xyli subsp. xyli str. CTCB07 2001 547 0.27 281309 Bacillus thuringiensis serovar konkukian str. 97-27 5169 1398 0.27 281310 Haemophilus influenzae 86-028NP 1792 698 0.39 281921 Raspberry ringspot virus strain cherry 2 2 1.00 282063 Arabis mosaic virus strain NW 2 2 1.00 282458 Staphylococcus aureus subsp. aureus MRSA252 2640 915 0.35 282459 Staphylococcus aureus subsp. aureus MSSA476 2602 918 0.35 283165 Bartonella quintana str. Toulouse 1146 493 0.43 283166 Bartonella henselae str. Houston-1 1481 524 0.35 283643 Cryptococcus neoformans var. neoformans B-3501A 6570 1907 0.29 283942 Idiomarina loihiensis L2TR 2608 968 0.37 284169 Influenza A virus (A/Ck/HK/31.2/2002(H5N1)) 11 10 0.91 284172 Influenza A virus (A/Ck/HK/37.4/2002(H5N1)) 11 10 0.91 284177 Influenza A virus (A/Ck/HK/YU22/2002(H5N1)) 11 10 0.91 284184 Influenza A virus (A/Ck/ST/4231/2003(H5N1)) 11 10 0.91 284208 Influenza A virus (A/Gf/HK/38/2002(H5N1)) 11 10 0.91 284214 Influenza A virus (A/SCk/HK/YU100/2002(H5N1)) 11 10 0.91 284215 Influenza A virus (A/teal/China/2978.1/2002(H5N1)) 11 10 0.91 284590 Kluyveromyces lactis NRRL Y-1140 5071 2013 0.40 284591 Yarrowia lipolytica CLIB122 6415 2085 0.33 284592 Debaryomyces hansenii CBS767 6243 2112 0.34 284593 Candida glabrata CBS 138 5197 2054 0.40 284811 Ashbya gossypii ATCC 10895 4761 1989 0.42 284812 Schizosaccharomyces pombe 972h- 5083 4960 0.98 284813 Encephalitozoon cuniculi GB-M1 1910 652 0.34 285006 Saccharomyces cerevisiae RM11-1a 5357 1783 0.33 288000 Bradyrhizobium sp. BTAi1 7570 1976 0.26 288681 Bacillus cereus E33L 5638 1468 0.26 288705 Renibacterium salmoninarum ATCC 33209 3421 788 0.23 289376 Thermodesulfovibrio yellowstonii DSM 11347 1982 633 0.32 289380 Clostridium perfringens SM101 2558 732 0.29 289397 Mycoplasma bovis PG45 742 234 0.32 290008 Isfahan virus 5 5 1.00 290315 Chlorobium limicola DSM 245 2419 631 0.26 290317 Chlorobium phaeobacteroides DSM 266 2579 623 0.24 290318 Chlorobium phaeovibrioides DSM 265 1750 560 0.32 290338 Citrobacter koseri ATCC BAA-895 5019 1732 0.35 290339 Cronobacter sakazakii ATCC BAA-894 4421 1477 0.33 290340 Arthrobacter aurescens TC1 4565 1107 0.24 290397 Anaeromyxobacter dehalogenans 2CP-C 4345 1178 0.27 290398 Chromohalobacter salexigens DSM 3043 3302 1160 0.35 290399 Arthrobacter sp. FB24 4453 1097 0.25 290400 Jannaschia sp. CCS1 4271 1138 0.27 290402 Clostridium beijerinckii NCIMB 8052 5003 1446 0.29 290512 Prosthecochloris aestuarii DSM 271 2319 652 0.28 290579 HIV-1 M:B_Lai 1 1 1.00 290633 Gluconobacter oxydans 621H 2626 782 0.30 290650 TT virus genotype 6 6 1 0.17 290847 Helicobacter pylori 51 1412 489 0.35 291175 Sapovirus Hu/Dresden/pJG-Sap01/DE 3 2 0.67 291272 Candidatus Blochmannia pennsylvanicus str. BPEN 610 357 0.59 291603 Faba bean necrotic yellows virus (isolate Egyptian EV1-93) 11 8 0.73 291604 Faba bean necrotic yellows virus (isolate SV292-88) 13 8 0.62 291605 Milk vetch dwarf virus (isolate 1) 12 9 0.75 291607 Subterranean clover stunt virus (strain F) 8 6 0.75 291795 Influenza B virus (B/Paris/329/90) 1 1 1.00 291796 Influenza B virus (B/Hong Kong/9/89) 1 1 1.00 291797 Influenza B virus (B/Hong Kong/22/89) 1 1 1.00 291798 Influenza B virus (B/Bangkok/163/90) 1 1 1.00 291799 Influenza B virus (B/Texas/1/91) 1 1 1.00 291800 Influenza B virus (B/Texas/4/90) 1 1 1.00 291801 Influenza B virus (B/New York/3/90) 1 1 1.00 291802 Influenza B virus (B/Guangdong/55/89) 1 1 1.00 291803 Influenza B virus (B/Victoria/103/89) 1 1 1.00 291804 Influenza B virus (B/Victoria/19/89) 1 1 1.00 291805 Influenza B virus (B/South Dakota/5/89) 1 1 1.00 291806 Influenza B virus (B/India/3/89) 1 1 1.00 292349 Feline calicivirus (strain Urbana) 3 2 0.67 292414 Ruegeria sp. TM1040 3849 1128 0.29 292415 Thiobacillus denitrificans ATCC 25259 2826 956 0.34 292805 Wolbachia endosymbiont strain TRS of Brugia malayi 805 328 0.41 293613 Rickettsia canadensis str. McKiel 1091 381 0.35 293614 Rickettsia akari str. Hartford 1257 403 0.32 293826 Alkaliphilus metalliredigens QYMF 4467 1139 0.25 294746 Meyerozyma guilliermondii ATCC 6260 5919 1862 0.31 294747 Candida tropicalis MYA-3404 6226 1709 0.27 294748 Candida albicans WO-1 5742 1597 0.28 295027 Human herpesvirus 5 strain Merlin 170 29 0.17 295358 Mycoplasma hyopneumoniae 232 691 236 0.34 295405 Bacteroides fragilis YCH46 4597 1017 0.22 296587 Micromonas sp. RCC299 10115 2079 0.21 296591 Polaromonas sp. JS666 5439 1514 0.28 297245 Legionella pneumophila str. Lens 2919 828 0.28 297246 Legionella pneumophila str. Paris 3147 867 0.28 298339 Pan troglodytes foamy virus 20 5 0.25 298653 Frankia sp. EAN1pec 7134 1211 0.17 298654 Frankia sp. EuI1c 7079 1256 0.18 299386 Equine arteritis virus Bucyrus 8 8 1.00 299768 Streptococcus thermophilus CNRZ1066 1590 540 0.34 300267 Shigella dysenteriae Sd197 3897 1346 0.35 300268 Shigella boydii Sb227 3938 1412 0.36 300269 Shigella sonnei Ss046 4068 1530 0.38 300852 Thermus thermophilus HB8 2236 599 0.27 300880 Swinepox virus (strain 17077-99) 146 15 0.10 301352 Vaccinia virus Tashkent 1 1 1.00 301447 Streptococcus pyogenes serotype M1 2308 691 0.30 301448 Streptococcus pyogenes serotype M3 1862 584 0.31 301450 Streptococcus pyogenes serotype M6 1882 587 0.31 301451 Streptococcus pyogenes serotype M18 1837 583 0.32 301478 Murray valley encephalitis virus (strain MVE-1-51) 1 1 1.00 302271 Sendai virus (strain Hamamatsu) 9 7 0.78 302272 Sendai virus (strain Ohita) 9 7 0.78 302409 Ehrlichia ruminantium str. Gardel 948 356 0.38 303300 Taro vein chlorosis virus 6 5 0.83 304371 Methanocella paludicola SANAE 2994 547 0.18 305674 Deerpox virus W-848-83 165 16 0.10 306263 Campylobacter lari RM2100 1545 560 0.36 306537 Corynebacterium jeikeium K411 2064 553 0.27 306901 Chaetomium globosum CBS 148.51 11041 2130 0.19 306902 Clavispora lusitaniae ATCC 42720 5932 1583 0.27 307796 Saccharomyces cerevisiae YJM789 5861 2061 0.35 308444 Human adenovirus 15/H9 1 0 0.00 309798 Coprothermobacter proteolyticus DSM 5265 1481 435 0.29 309799 Dictyoglomus thermophilum H-6-12 1913 544 0.28 309800 Haloferax volcanii DS2 3988 750 0.19 309801 Thermomicrobium roseum DSM 5159 2858 650 0.23 309803 Thermotoga neapolitana DSM 4359 1939 621 0.32 309807 Salinibacter ruber DSM 13855 2812 791 0.28 310273 Equine herpesvirus 1 (strain V592) 74 48 0.65 311175 Influenza A virus (A/turkey/Ontario/6118/1968(H8N4)) 24 20 0.83 311176 Blotched snakehead virus 3 2 0.67 311339 Human herpesvirus 5 strain Toledo 176 28 0.16 311402 Agrobacterium vitis S4 5353 1621 0.30 311403 Agrobacterium radiobacter K84 6700 2001 0.30 311424 Dehalococcoides sp. VS 1427 417 0.29 312017 Tetrahymena thermophila SB210 15290 1570 0.10 312153 Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 2074 710 0.34 312309 Vibrio fischeri ES114 3816 1388 0.36 314225 Erythrobacter litoralis HTCC2594 2999 747 0.25 314275 Alteromonas macleodii str. 'Deep ecotype' 3729 1101 0.30 314315 Lactobacillus sakei subsp. sakei 23K 1872 609 0.33 314536 Rabbit hemorrhagic disease virus-FRG 2 2 1.00 314538 Rabbit hemorrhagic disease virus-AST89 2 2 1.00 314565 Xanthomonas campestris pv. campestris str. 8004 4249 1265 0.30 314723 Borrelia hermsii DAH 885 365 0.41 314724 Borrelia turicatae 91E135 822 339 0.41 315277 Chlamydia trachomatis A/HAR-13 917 339 0.37 315456 Rickettsia felis URRWXCal2 1428 472 0.33 315730 Bacillus weihenstephanensis KBAB4 5650 1423 0.25 315749 Bacillus cytotoxicus NVH 391-98 3841 1066 0.28 315750 Bacillus pumilus SAFR-032 3676 1040 0.28 315953 Acidianus two-tailed virus 72 23 0.32 316055 Rhodopseudomonas palustris BisA53 4851 1332 0.27 316056 Rhodopseudomonas palustris BisB18 4864 1376 0.28 316057 Rhodopseudomonas palustris BisB5 4392 1215 0.28 316058 Rhodopseudomonas palustris HaA2 4680 1339 0.29 316067 Geobacter sp. FRC-32 3797 1096 0.29 316273 Xanthomonas campestris pv. vesicatoria str. 85-10 4629 1312 0.28 316274 Herpetosiphon aurantiacus DSM 785 5254 1086 0.21 316275 Aliivibrio salmonicida LFI1238 3516 1205 0.34 316278 Synechococcus sp. RCC307 2528 621 0.25 316279 Synechococcus sp. CC9902 2301 588 0.26 316385 Escherichia coli str. K-12 substr. DH10B 3990 1575 0.39 316401 Escherichia coli ETEC H10407 4819 1707 0.35 317025 Thiomicrospira crunogena XCL-2 2187 811 0.37 317655 Sphingopyxis alaskensis RB2256 3186 896 0.28 318161 Shewanella denitrificans OS217 3727 1208 0.32 318167 Shewanella frigidimarina NCIMB 400 3990 1305 0.33 318586 Paracoccus denitrificans PD1222 5019 1411 0.28 319224 Shewanella putrefaciens CN-32 3948 1344 0.34 319225 Chlorobium luteolum DSM 273 2075 641 0.31 319700 Streptococcus pyogenes serotype M28 1884 596 0.32 319795 Deinococcus geothermalis DSM 11300 3006 788 0.26 320372 Burkholderia pseudomallei 1710b 6329 1695 0.27 320373 Burkholderia pseudomallei 668 7102 1714 0.24 320388 Burkholderia mallei SAVP1 4981 1304 0.26 320389 Burkholderia mallei NCTC 10247 5182 1387 0.27 320483 Anaplasma marginale str. Florida 963 366 0.38 321327 Synechococcus sp. JA-3-3Ab 2748 713 0.26 321332 Synechococcus sp. JA-2-3B'a(2-13) 2835 732 0.26 321609 Cryphonectria hypovirus 1-Euro7 2 1 0.50 321614 Phaeosphaeria nodorum SN15 15998 2479 0.15 321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 1682 510 0.30 321967 Lactobacillus casei ATCC 334 2709 751 0.28 322098 Aster yellows witches'-broom phytoplasma AYWB 690 206 0.30 322104 Scheffersomyces stipitis CBS 6054 5797 1875 0.32 322159 Streptococcus thermophilus LMD-9 1704 539 0.32 322710 Azotobacter vinelandii DJ 4990 1406 0.28 323097 Nitrobacter hamburgensis X14 4245 1004 0.24 323098 Nitrobacter winogradskyi Nb-255 2980 801 0.27 323259 Methanospirillum hungatei JF-1 3087 690 0.22 323261 Nitrosococcus oceani ATCC 19707 2995 875 0.29 323848 Nitrosospira multiformis ATCC 25196 2732 859 0.31 323850 Shewanella loihica PV-4 3855 1291 0.33 324057 Paenibacillus sp. JDR-2 6210 1954 0.31 324602 Chloroflexus aurantiacus J-10-fl 3850 968 0.25 324831 Lactobacillus gasseri ATCC 33323 1696 580 0.34 324925 Pelodictyon phaeoclathratiforme BU-1 2685 629 0.23 325240 Shewanella baltica OS155 4223 1399 0.33 326297 Shewanella amazonensis SB2B 3638 1269 0.35 326298 Sulfurimonas denitrificans DSM 1251 2084 718 0.34 326423 Bacillus amyloliquefaciens FZB42 3695 1083 0.29 326424 Frankia alni ACN14a 6710 1055 0.16 326426 Bifidobacterium breve UCC2003 1827 568 0.31 326427 Chloroflexus aggregans DSM 9485 3725 885 0.24 326442 Pseudoalteromonas haloplanktis TAC125 3485 1159 0.33 327105 HIV-1 O_ANT70 9 9 1.00 328615 Trichoplusia ni ascovirus 2c 161 8 0.05 329389 Hepatitis C virus (isolate Glasgow) 1 1 1.00 329726 Acaryochloris marina MBIC11017 8176 1331 0.16 329852 Enterobacteria phage MS2 67 10 0.15 330779 Sulfolobus acidocaldarius DSM 639 2222 432 0.19 330879 Aspergillus fumigatus Af293 9641 2768 0.29 331111 Escherichia coli E24377A 4915 1671 0.34 331112 Escherichia coli HS 4308 1639 0.38 331117 Neosartorya fischeri NRRL 181 10392 2746 0.26 331271 Burkholderia cenocepacia AU 1054 6450 1994 0.31 331272 Burkholderia cenocepacia HI2424 6898 2082 0.30 331636 Chlamydophila psittaci 6BC 1219 403 0.33 331642 Newbury agent 1 2 2 1.00 331678 Chlorobium phaeobacteroides BS1 2434 620 0.25 332648 Botryotinia fuckeliana B05.10 16374 2289 0.14 332952 Aspergillus flavus NRRL3357 13484 3022 0.22 333284 Hepatitis C virus (isolate Con1) 1 1 1.00 333752 Human papillomavirus type 27 6 6 1.00 333753 Human papillomavirus type 57 7 6 0.86 333759 Human papillomavirus type 10 9 8 0.89 333760 Human papillomavirus type 16 933 619 0.66 333761 Human papillomavirus type 18 230 190 0.83 333762 Human papillomavirus type 26 6 6 1.00 333763 Human papillomavirus type 32 14 7 0.50 333764 Human papillomavirus type 34 28 8 0.29 333765 Human papillomavirus type 53 192 179 0.93 333766 Human papillomavirus 54 14 12 0.86 333770 Human papillomavirus type 72 8 7 0.88 333923 Human papillomavirus type 5 56 46 0.82 334210 Human papillomavirus type 62 15 13 0.87 334380 Orientia tsutsugamushi str. Ikeda 1648 341 0.21 334390 Lactobacillus fermentum IFO 3956 1818 584 0.32 334413 Finegoldia magna ATCC 29328 1813 544 0.30 335103 Adult diarrheal rotavirus strain J19 11 10 0.91 335283 Nitrosomonas eutropha C91 2473 780 0.32 335284 Psychrobacter cryohalolentis K5 2496 801 0.32 335541 Syntrophomonas wolfei subsp. wolfei str. Goettingen 2473 636 0.26 335543 Syntrophobacter fumaroxidans MPOB 4012 984 0.25 335992 Candidatus Pelagibacter ubique HTCC1062 1354 496 0.37 336407 Rickettsia bellii RML369-C 1400 460 0.33 336722 Mycosphaerella graminicola IPO323 10972 2127 0.19 336960 Avian nephritis virus 1 63 3 0.05 336963 Uncinocarpus reesii 1704 7760 1707 0.22 336982 Mycobacterium tuberculosis F11 3905 850 0.22 337080 Rice tungro spherical virus (isolate Vt6) 1 1 1.00 337081 Rice tungro spherical virus (isolate A) 1 1 1.00 338187 Vibrio harveyi ATCC BAA-1116 5605 1591 0.28 338478 Macaque simian foamy virus 14 13 0.93 338565 Erwinia tasmaniensis 3626 1359 0.37 338963 Pelobacter carbinolicus DSM 2380 3341 986 0.30 338966 Pelobacter propionicus DSM 2379 3694 1040 0.28 338969 Rhodoferax ferrireducens T118 4401 1393 0.32 339670 Burkholderia ambifaria AMMD 6600 1988 0.30 339671 Actinobacillus succinogenes 130Z 2077 831 0.40 339724 Ajellomyces capsulatus NAm1 9252 1791 0.19 339860 Methanosphaera stadtmanae DSM 3091 1533 324 0.21 340047 Mycoplasma capricolum subsp. capricolum ATCC 27343 814 282 0.35 340099 Thermoanaerobacter pseudethanolicus ATCC 33223 2197 666 0.30 340100 Bordetella petrii DSM 12804 4912 1492 0.30 340102 Pyrobaculum arsenaticum DSM 13514 2296 401 0.17 340177 Chlorobium chlorochromatii CaD3 1986 539 0.27 340322 Corynebacterium glutamicum R 3078 784 0.25 340907 Papiine herpesvirus 2 165 43 0.26 341663 Aspergillus terreus NIH2624 10402 2701 0.26 341946 Woodchuck hepatitis virus 2 5 4 0.80 341980 Human herpesvirus 3 strain Oka vaccine 75 46 0.61 342108 Magnetospirillum magneticum AMB-1 4516 1252 0.28 342109 Xanthomonas oryzae pv. oryzae MAFF 311018 4203 1112 0.26 342451 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 2406 794 0.33 342610 Pseudoalteromonas atlantica T6c 4271 1358 0.32 343462 Human adenovirus 11p 4 1 0.25 343463 Human adenovirus 11a 45 13 0.29 343509 Sodalis glossinidius str. 'morsitans' 2490 898 0.36 344609 Shigella boydii CDC 3083-94 4143 1396 0.34 344612 Aspergillus clavatus NRRL 1 9120 2478 0.27 345073 Vibrio cholerae O395 4206 1419 0.34 345184 Cabbage leal curl virus isolate Jamaica 29 21 0.72 345201 Invertebrate iridescent virus 3 126 27 0.21 347253 Streptococcus salivarius JIM8777 1978 639 0.32 347255 Rickettsia africae ESF-5 1041 395 0.38 347256 Mycoplasma hominis ATCC 23114 529 214 0.40 347257 Mycoplasma agalactiae PG2 725 237 0.33 347834 Rhizobium etli CFN 42 5922 1763 0.30 348136 Human rotavirus B219 11 10 0.91 348780 Natronomonas pharaonis DSM 2160 2784 571 0.21 349101 Rhodobacter sphaeroides ATCC 17029 4112 1257 0.31 349102 Rhodobacter sphaeroides ATCC 17025 4208 1198 0.28 349106 Psychrobacter sp. PRwf-1 2339 754 0.32 349124 Halorhodospira halophila SL1 2411 858 0.36 349161 Desulfotomaculum reducens MI-1 3220 894 0.28 349163 Acidiphilium cryptum JF-5 3521 963 0.27 349307 Methanosaeta thermophila PT 1673 382 0.23 349344 Bat SARS CoV Rp3/2004 13 11 0.85 349519 Leuconostoc citreum KM20 1812 587 0.32 349520 Paenibacillus polymyxa E681 4788 1319 0.28 349521 Hahella chejuensis KCTC 2396 6751 1731 0.26 349741 Akkermansia muciniphila ATCC BAA-835 2137 534 0.25 349746 Yersinia pestis Angola 3821 1383 0.36 349747 Yersinia pseudotuberculosis IP 31758 4305 1524 0.35 350054 Mycobacterium gilvum PYR-GCK 5499 1045 0.19 350058 Mycobacterium vanbaalenii PYR-1 5917 1110 0.19 350688 Alkaliphilus oremlandii OhILAs 2828 841 0.30 351160 uncultured methanogenic archaeon RC-I 3071 534 0.17 351348 Marinobacter aquaeolei VT8 4170 1253 0.30 351605 Geobacter uraniireducens Rf4 4255 1148 0.27 351607 Acidothermus cellulolyticus 11B 2158 663 0.31 351627 Caldicellulosiruptor saccharolyticus DSM 8903 2629 692 0.26 351669 Measles virus strain Biken 1 1 1.00 351745 Shewanella sp. W3-18-1 4007 1330 0.33 351746 Pseudomonas putida F1 5245 1752 0.33 352520 Influenza A virus (A/mallard/Alberta/35/1976(H1N1)) 6 6 1.00 352551 Influenza A virus (A/duck/Hong Kong/7/1975(H3N2)) 13 10 0.77 353152 Cryptosporidium parvum Iowa II 3800 933 0.25 353153 Trypanosoma cruzi strain CL Brener 19238 2606 0.14 354242 Campylobacter jejuni subsp. jejuni 81-176 1805 617 0.34 355276 Leptospira borgpetersenii serovar Hardjo-bovis L550 2872 693 0.24 355277 Leptospira borgpetersenii serovar Hardjo-bovis JB197 2829 686 0.24 355278 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 3595 889 0.25 355315 Streptococcus agalactiae serogroup Ia 1983 661 0.33 356386 Hepatitis C virus (isolate India) 1 1 1.00 356390 Hepatitis C virus SA13 1 1 1.00 356391 Hepatitis C virus (isolate 6a33) 1 1 1.00 356410 Hepatitis C virus (isolate HC-G9) 1 1 1.00 356411 Hepatitis C virus JFH-1 1 1 1.00 356412 Hepatitis C virus (isolate JPUT971017) 1 1 1.00 356413 Hepatitis C virus (isolate BEBE1) 1 1 1.00 356414 Hepatitis C virus (isolate VAT96) 1 1 1.00 356415 Hepatitis C virus (isolate NZL1) 1 1 1.00 356416 Hepatitis C virus (isolate HCV-K3a/650) 1 1 1.00 356417 Hepatitis C virus (isolate JK049) 1 1 1.00 356418 Hepatitis C virus ED43 2 2 1.00 356419 Hepatitis C virus (isolate EUH1480) 1 1 1.00 356420 Hepatitis C virus (isolate EUHK2) 1 1 1.00 356421 Hepatitis C virus (isolate Th580) 1 1 1.00 356422 Hepatitis C virus (isolate VN235) 1 1 1.00 356423 Hepatitis C virus (isolate JK046) 1 1 1.00 356424 Hepatitis C virus (isolate VN004) 1 1 1.00 356425 Hepatitis C virus (isolate VN405) 1 1 1.00 356663 Xenotropic MuLV-related virus VP35 3 3 1.00 356664 Xenotropic MuLV-related virus VP42 3 3 1.00 357244 Orientia tsutsugamushi str. Boryong 967 323 0.33 357348 Burkholderia pseudomallei 1106a 7145 1683 0.24 357355 Hepatitis C virus (isolate Tr Kj) 1 1 1.00 357544 Helicobacter pylori HPAG1 1541 503 0.33 357804 Psychromonas ingrahamii 37 3530 1183 0.34 357808 Roseiflexus sp. RS-1 4494 925 0.21 357809 Clostridium phytofermentans ISDg 3891 1141 0.29 358681 Brevibacillus brevis NBRC 100599 5887 1496 0.25 359391 Brucella melitensis biovar Abortus 2308 3024 992 0.33 359786 Staphylococcus aureus subsp. aureus JH9 2708 864 0.32 359787 Staphylococcus aureus subsp. aureus JH1 2761 861 0.31 360094 Xanthomonas oryzae pv. oryzae PXO99A 4587 1086 0.24 360095 Bartonella bacilliformis KC583 1255 495 0.39 360102 Yersinia pestis Antiqua 4135 1540 0.37 360104 Campylobacter concisus 13826 2063 615 0.30 360105 Campylobacter curvus 525.92 1928 647 0.34 360106 Campylobacter fetus subsp. fetus 82-40 1715 616 0.36 360107 Campylobacter hominis ATCC BAA-381 1687 507 0.30 360109 Campylobacter jejuni subsp. doylei 269.97 1712 553 0.32 360115 Coxiella burnetii RSA 331 1891 522 0.28 360393 Breda virus serotype 1 6 6 1.00 360910 Bordetella avium 197N 3372 1135 0.34 360911 Exiguobacterium sp. AT1b 3021 880 0.29 361100 Bacillus cereus Q1 5459 1394 0.26 362242 Mycobacterium ulcerans Agy99 4208 795 0.19 362651 Human immunodeficiency virus type 1 (isolate YU2) 9 9 1.00 362663 Escherichia coli 536 4605 1739 0.38 362948 Lactobacillus salivarius UCC118 1998 584 0.29 362976 Haloquadratum walsbyi DSM 16790 2645 501 0.19 363066 Influenza A virus (A/South Canterbury/35/2000(H1N1)) 11 10 0.91 363253 Lawsonia intracellularis PHE/MN1-00 1342 478 0.36 364106 Escherichia coli UTI89 5198 1755 0.34 364370 Turkey astrovirus 1 36 3 0.08 365044 Polaromonas naphthalenivorans CJ2 4887 1288 0.26 365089 Influenza A virus (A/goose/Guangxi/345/2005(H5N1)) 11 10 0.91 365659 Streptococcus mitis B6 1978 602 0.30 366394 Sinorhizobium medicae WSM419 6148 1798 0.29 366602 Caulobacter sp. K31 5373 1360 0.25 367110 Neurospora crassa OR74A 9841 2362 0.24 367737 Arcobacter butzleri RM4018 2254 782 0.35 367775 Cryptococcus gattii WM276 6560 1676 0.26 367830 Staphylococcus aureus subsp. aureus USA300 2607 905 0.35 367928 Bifidobacterium adolescentis ATCC 15703 1629 527 0.32 368407 Methanoculleus marisnigri JR1 2476 491 0.20 368408 Thermofilum pendens Hrk 5 1876 370 0.20 369723 Salinispora tropica CNB-440 4524 960 0.21 370354 Entamoeba dispar SAW760 8606 1597 0.19 370438 Pelotomaculum thermopropionicum SI 2884 678 0.24 370551 Streptococcus pyogenes MGAS9429 1868 573 0.31 370552 Streptococcus pyogenes MGAS10270 1964 593 0.30 370553 Streptococcus pyogenes MGAS2096 1885 582 0.31 370554 Streptococcus pyogenes MGAS10750 1964 593 0.30 371094 Chikungunya virus strain S27-African prototype 2 2 1.00 371095 Chikungunya virus strain Senegal 37997 2 2 1.00 371096 Chikungunya virus strain Nagpur 1 1 1.00 372461 Buchnera aphidicola BCc 362 228 0.63 373153 Streptococcus pneumoniae D39 1923 625 0.33 373193 Xenotropic MuLV-related virus VP62 3 3 1.00 373384 Shigella flexneri 5 str. 8401 3867 1451 0.38 373903 Halothermothrix orenii H 168 2324 763 0.33 374463 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 595 341 0.57 374596 Eastern equine encephalitis virus (strain PE-0.0155) 2 2 1.00 374597 Eastern equine encephalitis virus (strain PE-3.0815) 2 2 1.00 374598 Eastern equine encephalitis virus (strain Florida 91-469) 2 2 1.00 374833 Neisseria meningitidis 053442 1998 613 0.31 374847 Candidatus Korarchaeum cryptofilum OPF8 1602 361 0.23 374930 Haemophilus influenzae PittEE 1615 656 0.41 374931 Haemophilus influenzae PittGG 1662 647 0.39 374989 O'nyong-nyong virus (strain SG650) 2 2 1.00 374990 Mayaro virus (strain Brazil) 2 2 1.00 375286 Janthinobacterium sp. Marseille 3695 1258 0.34 375451 Roseobacter denitrificans OCh 114 4119 1157 0.28 376262 Rubella virus strain BRD1 2 2 1.00 376263 Rubella virus strain BRDII 2 2 1.00 376264 Rubella virus strain TO-336 2 2 1.00 376265 Rubella virus strain TO-336 vaccine 2 2 1.00 376266 Rubella virus strain Cendehill 2 2 1.00 376267 Rubella virus strain RN-UK86 2 2 1.00 376610 Venezuelan equine encephalitis virus (strain CPA201) 1 1 1.00 376619 Francisella tularensis subsp. holarctica LVS 1678 572 0.34 376686 Flavobacterium johnsoniae UW101 5020 1141 0.23 377628 Yersinia pestis Nepal516 4869 1655 0.34 377629 Teredinibacter turnerae T7901 4250 1192 0.28 378753 Kocuria rhizophila DC2201 2352 628 0.27 378806 Stigmatella aurantiaca DW4/3-1 12954 2412 0.19 378809 Ravn virus - Ravn, Kenya, 1987 24 13 0.54 378830 Lake Victoria marburgvirus - Angola2005 11 10 0.91 379066 Gemmatimonas aurantiaca T-27 3932 990 0.25 379508 Lodderomyces elongisporus NRRL YB-4239 5779 1691 0.29 379731 Pseudomonas stutzeri A1501 4092 1412 0.35 379756 Influenza A virus (A/New Jersey/8/1976(H1N1)) 14 11 0.79 380213 Influenza A virus (A/Taiwan/1/1986(H1N1)) 27 15 0.56 380216 Influenza A virus (A/swine/Hong Kong/3/1976(H3N2)) 2 2 1.00 380217 Influenza A virus (A/swine/Hong Kong/4/1976(H3N2)) 1 1 1.00 380282 Influenza A virus (A/Fort Monmouth/1/1947-mouse adapted(H1N1)) 11 10 0.91 380285 Influenza A virus (A/turkey/Ireland/1378/1983(H5N8)) 11 10 0.91 380337 Influenza A virus (A/equine/Prague/1/1956(H7N7)) 18 15 0.83 380340 Influenza A virus (A/equine/London/1416/1973(H7N7)) 7 6 0.86 380341 Influenza A virus (A/swine/Iowa/17672/1988(H1N1)) 16 13 0.81 380342 Influenza A virus (A/swine/Iowa/15/1930(H1N1)) 16 15 0.94 380346 Influenza A virus (A/Wisconsin/3523/1988(H1N1)) 6 6 1.00 380347 Influenza A virus (A/swine/Netherlands/12/1985(H1N1)) 7 7 1.00 380349 Influenza A virus (A/turkey/Minnesota/1661/1981(H1N1)) 3 3 1.00 380394 Acidithiobacillus ferrooxidans ATCC 53993 2747 796 0.29 380703 Aeromonas hydrophila subsp. hydrophila ATCC 7966 4122 1557 0.38 380749 Hydrogenobaculum sp. Y04AAS1 1626 531 0.33 380949 Influenza A virus (A/Beijing/353/1989(H3N2)) 16 13 0.81 380960 Influenza A virus (A/Tokyo/3/1967(H2N2)) 10 9 0.90 380983 Influenza A virus (A/Leningrad/134/47/1957(H2N2)) 9 8 0.89 380984 Influenza A virus (A/Leningrad/134/17/1957(H2N2)) 10 9 0.90 380985 Influenza A virus (A/Chile/1/1983(H1N1)) 11 10 0.91 381516 Influenza A virus (A/USSR/90/1977(H1N1)) 16 15 0.94 381517 Influenza A virus (A/Udorn/307/1972(H3N2)) 10 9 0.90 381518 Influenza A virus (A/Wilson-Smith/1933(H1N1)) 32 24 0.75 381666 Ralstonia eutropha H16 6614 1963 0.30 381754 Pseudomonas aeruginosa PA7 6246 1876 0.30 381764 Fervidobacterium nodosum Rt17-B1 1726 553 0.32 382245 Aeromonas salmonicida subsp. salmonicida A449 4342 1503 0.35 382638 Helicobacter acinonychis str. Sheeba 1596 503 0.32 382640 Bartonella tribocorum CIP 105476 1962 541 0.28 382781 Influenza A virus (A/Singapore/1/1957(H2N2)) 24 20 0.83 382812 Influenza A virus (A/Guangdong/39/1989(H3N2)) 7 7 1.00 382825 Influenza A virus (A/Philippines/2/1982(H3N2)) 17 14 0.82 382828 Influenza A virus (A/RI/5-/1957(H2N2)) 7 6 0.86 382838 Influenza A virus (A/chicken/Germany/N/1949(H10N7)) 25 20 0.80 382842 Influenza A virus (A/swine/29/1937(H1N1)) 5 5 1.00 382844 Influenza A virus (A/swine/Cambridge/1/1935(H1N1)) 1 1 1.00 382846 Influenza A virus (A/swine/Dandong/9/1983(H3N2)) 1 1 1.00 382848 Influenza A virus (A/swine/Hong Kong/126/1982(H3N2)) 10 8 0.80 382851 Influenza A virus (A/swine/Italy/839/1989(H1N1)) 1 1 1.00 382855 Influenza A virus (A/swine/Wisconsin/1/1967(H1N1)) 11 9 0.82 383372 Roseiflexus castenholzii DSM 13941 4324 940 0.22 383530 Influenza A virus (A/swine/Italy/141/1981(H1N1)) 1 1 1.00 383531 Influenza A virus (A/swine/Italy/2/1979(H1N1)) 1 1 1.00 383532 Influenza A virus (A/swine/Italy/437/1976(H1N1)) 1 1 1.00 383533 Influenza A virus (A/swine/Wisconsin/1/1961(H1N1)) 11 9 0.82 383534 Influenza A virus (A/swine/Wisconsin/1/1957(H1N1)) 12 9 0.75 383535 Influenza A virus (A/swine/May/1954(H1N1)) 3 3 1.00 383536 Influenza A virus (A/swine/41/1949(H1N1)) 1 1 1.00 383537 Influenza A virus (A/swine/Iowa/1946(H1N1)) 1 1 1.00 383538 Influenza A virus (A/swine/Jamesburg/1942(H1N1)) 12 9 0.75 383539 Influenza A virus (A/swine/Ohio/23/1935(H1N1)) 12 9 0.75 383541 Influenza A virus (A/England/19/1955(H1N1)) 1 1 1.00 383543 Influenza A virus (A/Hickox/1940(H1N1)) 11 10 0.91 383546 Influenza A virus (A/teal/Iceland/29/1980(H7N7)) 1 1 1.00 383547 Influenza A virus (A/duck/Australia/749/1980(H1N1)) 13 10 0.77 383550 Influenza A virus (A/duck/England/1/1956(H11N6)) 24 20 0.83 383551 Influenza A virus (A/fowl/Dobson/'Dutch'/1927(H7N7)) 1 1 1.00 383567 Influenza A virus (A/Shanghai/16/1989(H3N2)) 2 2 1.00 383568 Influenza A virus (A/Shanghai/11/1987(H3N2)) 3 3 1.00 383569 Influenza A virus (A/Shanghai/31/1980(H3N2)) 2 2 1.00 383570 Influenza A virus (A/Shanghai/6/1990(H3N2)) 2 2 1.00 383571 Influenza A virus (A/Memphis/6/1986(H3N2)) 2 2 1.00 383572 Influenza A virus (A/Memphis/14/1985(H3N2)) 1 1 1.00 383575 Influenza A virus (A/Memphis/5/1980(H3N2)) 1 1 1.00 383578 Influenza A virus (A/Memphis/4/1980(H3N2)) 11 10 0.91 383579 Influenza A virus (A/Memphis/18/1978(H3N2)) 11 10 0.91 383580 Influenza A virus (A/Memphis/2/1978(H3N2)) 11 10 0.91 383581 Influenza A virus (A/Memphis/110/1976(H3N2)) 11 10 0.91 383582 Influenza A virus (A/Memphis/1/1973(H3N2)) 1 1 1.00 383583 Influenza A virus (A/Memphis/101/1972(H3N2)) 11 10 0.91 383586 Influenza A virus (A/Memphis/1/1971(H3N2)) 13 12 0.92 383588 Influenza A virus (A/Memphis/8/1988(H3N2)) 16 13 0.81 383589 Influenza A virus (A/Memphis/3/1988(H3N2)) 12 9 0.75 383592 Influenza A virus (A/Guangdong/9/1987(H3N2)) 2 2 1.00 383593 Influenza A virus (A/Guangdong/38/1977(H3N2)) 1 1 1.00 383595 Influenza A virus (A/Beijing/337/1989(H3N2)) 1 1 1.00 383596 Influenza A virus (A/Beijing/39/1975(H3N2)) 11 10 0.91 383597 Influenza A virus (A/Beijing/352/1989(H3N2)) 4 4 1.00 383603 Influenza A virus (A/turkey/Minnesota/833/1980(H4N2)) 11 10 0.91 384479 Influenza A virus (A/swine/Tennessee/26/1977(H1N1)) 3 2 0.67 384482 Influenza A virus (A/swine/Iowa/1976/1931(H1N1)) 2 2 1.00 384483 Influenza A virus (A/swine/Hong Kong/127/1982(H3N2)) 5 5 1.00 384484 Influenza A virus (A/swine/Hong Kong/81/1978(H3N2)) 12 8 0.67 384485 Influenza A virus (A/swine/Hong Kong/6/1976(H3N2)) 2 2 1.00 384487 Influenza A virus (A/Swine/Indiana/1726/1988(H1N1)) 15 10 0.67 384493 Influenza A virus (A/seal/Mass/1/1980(H7N7)) 12 10 0.83 384495 Influenza A virus (A/Kiev/59/1979(H1N1)) 5 5 1.00 384498 Influenza A virus (A/Ann Arbor/6/1960(H2N2)) 14 12 0.86 384499 Influenza A virus (A/gull/Maryland/704/1977(H13N6)) 27 23 0.85 384500 Influenza A virus (A/Beijing/11/1956(H1N1)) 1 1 1.00 384501 Influenza A virus (A/swine/Ontario/2/1981(H1N1)) 15 12 0.80 384502 Influenza A virus (A/mallard/New York/6750/1978(H2N2)) 11 10 0.91 384505 Influenza A virus (A/nt/60/1968(H3N2)) 9 7 0.78 384518 Influenza A virus (A/mallard/New York/6874/1978(H3N2)) 11 9 0.82 384525 Influenza A virus (A/Fort Warren/1/1950(H1N1)) 8 7 0.88 384616 Pyrobaculum islandicum DSM 4184 1976 378 0.19 384676 Pseudomonas entomophila L48 5126 1694 0.33 385576 Influenza A virus (A/Alaska/6/1977(H3N2)) 2 2 1.00 385586 Influenza A virus (A/chicken/Pennsylvania/1/1983(H5N2)) 12 11 0.92 385590 Influenza A virus (A/duck/Czechoslovakia/1956(H4N6)) 21 18 0.86 385596 Influenza A virus (A/Ohio/4/1983(H1N1)) 1 1 1.00 385597 Influenza A virus (A/gull/Minnesota/945/1980(H13N6)) 11 10 0.91 385606 Influenza A virus (A/swine/Tennessee/24/1977(H1N1)) 4 4 1.00 385620 Influenza A virus (A/turkey/Wisconsin/1/1966(H9N2)) 24 20 0.83 385624 Influenza A virus (A/Port Chalmers/1/1973(H3N2)) 14 13 0.93 385630 Influenza A virus (A/Bangkok/1/1979(H3N2)) 15 12 0.80 385640 Influenza A virus (A/Memphis/102/1972(H3N2)) 13 12 0.92 385644 Influenza A virus (A/swine/Ukkel/1/1984(H3N2)) 1 1 1.00 385645 Influenza A virus (A/swine/Colorado/1/1977(H3N2)) 12 11 0.92 386032 Reston ebolavirus - Reston (1989) 9 9 1.00 386033 Sudan ebolavirus - Uganda (2000) 9 9 1.00 386043 Listeria welshimeri serovar 6b str. SLCC5334 2769 875 0.32 386415 Clostridium novyi NT 2305 706 0.31 386656 Yersinia pestis Pestoides F 3942 1475 0.37 387092 Nitratiruptor sp. SB155-2 1843 624 0.34 387093 Sulfurovum sp. NBC37-1 2433 679 0.28 387139 Influenza A virus (A/Aichi/2/1968(H3N2)) 11 11 1.00 387147 Influenza A virus (A/England/878/1969(H3N2)) 10 9 0.90 387159 Influenza A virus (A/Hong Kong/5/1983(H3N2)) 11 10 0.91 387161 Influenza A virus (A/Japan/305/1957(H2N2)) 34 27 0.79 387163 Influenza A virus (A/Leningrad/134/1957(H2N2)) 10 9 0.90 387191 Influenza A virus (A/camel/Mongolia/1982(H1N1)) 7 5 0.71 387203 Influenza A virus (A/duck/Bavaria/2/1977(H1N1)) 4 4 1.00 387207 Influenza A virus (A/duck/Hokkaido/8/1980(H3N8)) 11 10 0.91 387344 Lactobacillus brevis ATCC 367 2201 671 0.30 387662 Candidatus Carsonella ruddii PV 182 81 0.45 388396 Vibrio fischeri MJ11 4034 1390 0.34 388796 HIV-1 M:C_ETH2220 9 9 1.00 388812 HIV-1 M:C_92BR025 9 9 1.00 388813 HIV-1 M:F1_VI850 9 9 1.00 388814 HIV-1 M:F1_93BR020 9 9 1.00 388815 HIV-1 M:F2_MP255C 8 8 1.00 388816 HIV-1 O_MVP5180 9 9 1.00 388818 HIV-1 N_YBF30 9 9 1.00 388819 HIV-1 N_YBF106 9 9 1.00 388821 HIV-2 B_EHO 10 10 1.00 388822 HIV-2 B_UC1 9 9 1.00 388823 HIV-1 M:F2_MP257C 8 8 1.00 388824 HIV-1 M:G_SE6165 7 7 1.00 388825 HIV-1 M:G_92NG083 8 8 1.00 388826 HIV-1 M:H_90CF056 9 9 1.00 388888 HIV-1 M:H_VI991 8 8 1.00 388904 HIV-1 M:J_SE9173 8 8 1.00 388905 HIV-1 M:J_SE9280 8 8 1.00 388906 HIV-1 M:K_96CM-MP535 8 8 1.00 388907 HIV-1 M:K_97ZR-EQTB11 8 8 1.00 388910 SIVcpz TAN1 9 9 1.00 388911 SIVcpz MB66 9 9 1.00 388912 SIVcpz EK505 9 9 1.00 388919 Streptococcus sanguinis SK36 2269 698 0.31 389167 Bat CoV 279/2005 12 11 0.92 389230 Bat coronavirus (BtCoV/133/2005) 10 8 0.80 390235 Pseudomonas putida W619 5179 1713 0.33 390236 Borrelia afzelii PKo 1886 541 0.29 390333 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 1522 497 0.33 390874 Thermotoga petrophila RKU-1 1784 582 0.33 391008 Stenotrophomonas maltophilia R551-3 4026 1341 0.33 391009 Thermosipho melanesiensis BI429 1877 559 0.30 391037 Salinispora arenicola CNS-205 4848 991 0.20 391038 Burkholderia phymatum STM815 7465 2183 0.29 391165 Granulibacter bethesdensis CGDNIH1 2430 708 0.29 391295 Streptococcus suis 05ZYH33 2178 642 0.29 391296 Streptococcus suis 98HAH33 2179 638 0.29 391595 Roseobacter litoralis Och 149 4500 1255 0.28 391735 Verminephrobacter eiseniae EF01-2 4911 1446 0.29 391774 Desulfovibrio vulgaris DP4 3085 992 0.32 391896 Rickettsia bellii OSU 85-389 1443 416 0.29 391904 Bifidobacterium longum subsp. infantis ATCC 15697 3196 745 0.23 392021 Rickettsia rickettsii str. 'Sheila Smith' 1345 406 0.30 392499 Sphingomonas wittichii RW1 5317 1339 0.25 392500 Shewanella woodyi ATCC 51908 4865 1501 0.31 392809 Influenza A virus (A/Victoria/3/1975(H3N2)) 7 6 0.86 393011 Francisella tularensis subsp. holarctica OSU18 1510 517 0.34 393115 Francisella tularensis subsp. tularensis FSC198 1528 542 0.35 393305 Yersinia enterocolitica subsp. enterocolitica 8081 4021 1598 0.40 393557 Influenza A virus (A/Leningrad/1954/1(H1N1)) 5 5 1.00 393560 Influenza A virus (A/Brazil/11/1978(H1N1)) 13 12 0.92 393562 Influenza A virus (A/India/6263/1980(H1N1)) 11 10 0.91 393563 Influenza A virus (A/England/321/1977(H3N2)) 1 1 1.00 393595 Alcanivorax borkumensis SK2 2756 910 0.33 394221 Maricaulis maris MCS10 3060 905 0.30 394239 Koala retrovirus 3 3 1.00 394503 Clostridium cellulolyticum H10 3289 816 0.25 394786 Influenza A virus (A/Nanchang/11/1996(H1N1)) 11 10 0.91 395019 Burkholderia multivorans ATCC 17616 7214 2138 0.30 395491 Rhizobium leguminosarum bv. trifolii WSM1325 6988 2001 0.29 395492 Rhizobium leguminosarum bv. trifolii WSM2304 6403 1893 0.30 395494 Gallionella capsiferriformans ES-2 2853 971 0.34 395495 Leptothrix cholodnii SP-6 4343 1358 0.31 395960 Rhodopseudomonas palustris TIE-1 5245 1419 0.27 395961 Cyanothece sp. PCC 7425 5232 1101 0.21 395963 Beijerinckia indica subsp. indica ATCC 9039 3774 1017 0.27 395965 Methylocella silvestris BL2 3816 1018 0.27 396513 Staphylococcus carnosus subsp. carnosus TM300 2460 792 0.32 396588 Thioalkalivibrio sulfidophilus HL-EbGr7 3272 969 0.30 396595 Thioalkalivibrio sp. K90mix 2823 865 0.31 397342 Horsepox virus 228 21 0.09 397945 Acidovorax citrulli AAC00-1 4602 1358 0.30 397948 Caldivirga maquilingensis IC-167 1962 410 0.21 398511 Bacillus pseudofirmus OF4 4312 1082 0.25 398527 Burkholderia phytofirmans PsJN 7197 2163 0.30 398577 Burkholderia ambifaria MC40-6 6690 1997 0.30 398578 Delftia acidovorans SPH-1 5968 1860 0.31 398579 Shewanella pealeana ATCC 700345 4181 1384 0.33 398580 Dinoroseobacter shibae DFL 12 4086 1142 0.28 398767 Geobacter lovleyi SZ 3644 1060 0.29 399549 Metallosphaera sedula DSM 5348 2256 456 0.20 399550 Staphylothermus marinus F1 1570 326 0.21 399599 Shewanella baltica OS195 4619 1424 0.31 399726 Thermoanaerobacter sp. X514 2323 688 0.30 399739 Pseudomonas mendocina ymp 4563 1568 0.34 399741 Serratia proteamaculans 568 4930 1813 0.37 399742 Enterobacter sp. 638 4238 1642 0.39 400667 Acinetobacter baumannii ATCC 17978 3798 1057 0.28 400668 Marinomonas sp. MWYL1 4416 1545 0.35 400673 Legionella pneumophila str. Corby 3202 867 0.27 401473 Bifidobacterium dentium Bd1 2121 647 0.31 401614 Francisella novicida U112 1721 605 0.35 401671 HIV-1 M:B_89.6 9 9 1.00 402036 HTLV-3 strain 2026ND 6 6 1.00 402046 HTLV-1 isolate Mel 15 7 7 1.00 402464 Influenza A virus (A/gray teal/Australia/2/1979(H4N4)) 12 11 0.92 402520 Influenza A virus (A/chicken/Victoria/1985(H7N7)) 11 10 0.91 402525 Influenza A virus (A/starling/Victoria/5156/1985(H7N7)) 10 7 0.70 402527 Influenza A virus (A/chicken/Scotland/1959(H5N1)) 21 17 0.81 402612 Flavobacterium psychrophilum JIP02/86 2408 601 0.25 402626 Ralstonia pickettii 12J 4890 1609 0.33 402676 Schizosaccharomyces japonicus yFS275 4789 1543 0.32 402880 Methanococcus maripaludis C5 1821 418 0.23 402881 Parvibaculum lavamentivorans DS-1 3580 951 0.27 402882 Shewanella baltica OS185 4367 1410 0.32 403677 Phytophthora infestans T30-4 17605 2955 0.17 403833 Petrotoga mobilis SJ95 1890 599 0.32 404380 Geobacter bemidjiensis Bem 4048 1207 0.30 404589 Anaeromyxobacter sp. Fw109-5 4461 1188 0.27 405416 Acinetobacter baumannii ACICU 3745 1044 0.28 405440 Xylella fastidiosa M12 2056 646 0.31 405441 Xylella fastidiosa M23 2163 660 0.31 405531 Bacillus cereus G9842 5844 1388 0.24 405532 Bacillus cereus B4264 5384 1367 0.25 405534 Bacillus cereus AH187 5747 1395 0.24 405535 Bacillus cereus AH820 5798 1424 0.25 405566 Lactobacillus helveticus DPC 4571 1580 525 0.33 405948 Saccharopolyspora erythraea NRRL 2338 7173 1467 0.20 405955 Escherichia coli APEC O1 4870 1705 0.35 406327 Methanococcus vannielii SB 1661 399 0.24 406425 Burkholderia cenocepacia MC0-3 6986 2152 0.31 406769 Human T-cell leukemia virus 3 (strain Pyl43) 6 6 1.00 406817 Xenorhabdus nematophila ATCC 19061 4439 1049 0.24 406818 Xenorhabdus bovienii SS-2004 4102 1060 0.26 407134 Yellow fever virus strain Ghana/Asibi/1927 1 1 1.00 407135 Yellow fever virus strain French neurotropic vaccine 1 1 1.00 407136 Yellow fever virus isolate Ivory Coast/1999 1 1 1.00 407137 Yellow fever virus Trinidad/79A/1979 1 1 1.00 407138 Yellow fever virus isolate Ivory Coast/85-82H/1982 1 1 1.00 407139 Yellow fever virus isolate Uganda/A7094A4/1948 1 1 1.00 407140 Yellow fever virus isolate Angola/14FA/1971 1 1 1.00 407141 Yellow fever virus isolate Ethiopia/Couma/1961 1 1 1.00 407148 Campylobacter jejuni subsp. jejuni 81116 1622 603 0.37 407976 Shewanella baltica OS223 4384 1388 0.32 408685 Dengue virus 1 Brazil/97-11/1997 1 1 1.00 408686 Dengue virus 4 Philippines/H241/1956 1 1 1.00 408687 Dengue virus 4 Singapore/8976/1995 1 1 1.00 408688 Dengue virus 4 Thailand/0348/1991 1 1 1.00 408689 Dengue virus 4 Thailand/0476/1997 1 1 1.00 408690 Dengue virus 3 China/80-2/1980 1 1 1.00 408691 Dengue virus 3 Martinique/1243/1999 1 1 1.00 408692 Dengue virus 3 Sri Lanka/1266/2000 1 1 1.00 408693 Dengue virus 3 Singapore/8120/1995 1 1 1.00 408694 Dengue virus 2 Peru/IQT2913/1996 1 1 1.00 408870 Dengue virus 3 Philippines/H87/1956 1 1 1.00 408871 Dengue virus 4 Dominica/814669/1981 1 1 1.00 409438 Escherichia coli SE11 4979 1726 0.35 410289 Mycobacterium bovis BCG str. Pasteur 1173P2 3894 857 0.22 410358 Methanocorpusculum labreanum Z 1739 373 0.21 410359 Pyrobaculum calidifontis JCM 11548 2148 409 0.19 411154 Gramella forsetii KT0803 3554 815 0.23 412022 Burkholderia mallei NCTC 10229 4943 1350 0.27 412418 Borrelia recurrentis A1 977 357 0.37 412419 Borrelia duttonii Ly 1287 422 0.33 412694 Bacillus thuringiensis str. Al Hakam 4792 1355 0.28 412965 Candidatus Vesicomyosocius okutanii HA 936 405 0.43 413041 Dengue virus 2 Thailand/0168/1979 1 1 1.00 413404 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 976 420 0.43 413997 Escherichia coli B str. REL606 4142 1620 0.39 414004 Cenarchaeum symbiosum A 2022 295 0.15 414684 Rhodospirillum centenum SW 3984 1134 0.28 415426 Hyperthermus butylicus DSM 5456 1602 325 0.20 416269 Actinobacillus pleuropneumoniae serovar 5b str. L20 2004 807 0.40 416276 Rickettsia massiliae MTU5 974 391 0.40 416348 Halorubrum lacusprofundi ATCC 49239 3497 592 0.17 416591 Thermotoga lettingae TMO 2040 690 0.34 416674 Influenza B virus (B/Yamagata/16/1988) 17 10 0.59 416730 Influenza A virus (A/Memphis/10/1996(H1N1)) 11 10 0.91 416870 Lactococcus lactis subsp. cremoris MG1363 2390 675 0.28 418127 Staphylococcus aureus subsp. aureus Mu3 2684 884 0.33 418136 Francisella tularensis subsp. tularensis WY96-3418 1573 543 0.35 418459 Puccinia graminis f. sp. tritici CRL 75-36-700-3 20437 1688 0.08 419610 Methylobacterium extorquens PA1 4822 1296 0.27 419665 Methanococcus aeolicus Nankai-3 1490 360 0.24 419942 Sulfolobus islandicus Y.N.15.51 2853 488 0.17 419947 Mycobacterium tuberculosis H37Ra 3991 840 0.21 420174 Hepatitis C virus isolate HC-J4 1 1 1.00 420246 Geobacillus thermodenitrificans NG80-2 3424 961 0.28 420247 Methanobrevibacter smithii ATCC 35061 1783 372 0.21 420662 Methylibium petroleiphilum PM1 4359 1262 0.29 421877 Hepatitis C virus isolate HC-J1 1 1 1.00 421879 Hepatitis C virus isolate HCR6 1 1 1.00 423211 Streptococcus suis GZ1 1968 604 0.31 423212 Legionella pneumophila 2300/99 Alcoy 3184 873 0.27 423368 Salmonella enterica subsp. enterica serovar Newport str. SL254 4784 1661 0.35 423447 KI polyomavirus Stockholm 350 4 4 1.00 425011 Aspergillus niger CBS 513.88 14089 2911 0.21 425104 Shewanella sediminis HAW-EB3 4493 1475 0.33 425265 Malassezia globosa CBS 7966 4275 1170 0.27 425551 Influenza A virus (A/AA/Huston/1945(H1N1)) 11 10 0.91 425557 Influenza A virus (A/California/10/1978(H1N1)) 12 9 0.75 425562 Influenza A virus (A/Henry/1936(H1N1)) 11 10 0.91 425563 Influenza A virus (A/Iowa/1943(H1N1)) 11 10 0.91 425566 Influenza A virus (A/Malaya/302/1954(H1N1)) 11 10 0.91 425570 Influenza A virus (A/Phila/1935(H1N1)) 11 10 0.91 425580 Influenza A virus (A/Albany/12/1951(H1N1)) 11 10 0.91 425944 Sulfolobus islandicus L.D.8.5 2940 493 0.17 426114 Thiomonas sp. 3As 3527 1066 0.30 426117 Methylobacterium sp. 4-46 6647 1688 0.25 426118 Sulfolobus islandicus M.16.4 2729 491 0.18 426355 Methylobacterium radiotolerans JCM 2831 6388 1641 0.26 426368 Methanococcus maripaludis C7 1786 423 0.24 426418 Pyrenophora tritici-repentis Pt-1C-BFP 12063 2272 0.19 426430 Staphylococcus aureus subsp. aureus str. Newman 2583 867 0.34 427317 Sulfolobus islandicus M.14.25 2597 499 0.19 427318 Sulfolobus islandicus M.16.27 2650 498 0.19 428406 Ralstonia pickettii 12D 5315 1524 0.29 429314 Infectious hematopoietic necrosis virus - WRAC 6 5 0.83 429315 Infectious hematopoietic necrosis virus - Oregon69 6 5 0.83 429572 Sulfolobus islandicus L.S.2.15 2725 484 0.18 430066 Brucella abortus S19 2996 1001 0.33 431241 Trichoderma reesei QM6a 9114 2180 0.24 431317 Triticum mosaic virus 2 2 1.00 431943 Clostridium kluyveri DSM 555 3828 943 0.25 431946 Escherichia coli SE15 4461 1699 0.38 431947 Porphyromonas gingivalis ATCC 33277 2022 500 0.25 434131 Neorickettsia risticii str. Illinois 898 296 0.33 434271 Actinobacillus pleuropneumoniae serovar 3 str. JL03 2026 806 0.40 434488 Vesicular stomatitis Indiana virus (strain 98COE North America) 6 5 0.83 434489 Vesicular stomatitis Indiana virus (strain 94GUB Central America) 6 5 0.83 434490 Vesicular stomatitis Indiana virus (strain 85CLB South America) 6 5 0.83 434922 Coxiella burnetii Dugway 5J108-111 2029 556 0.27 434923 Coxiella burnetii CbuG_Q212 1831 526 0.29 434924 Coxiella burnetii CbuK_Q154 1915 528 0.28 435590 Bacteroides vulgatus ATCC 8482 3982 969 0.24 435591 Parabacteroides distasonis ATCC 8503 3830 993 0.26 436017 Ostreococcus lucimarinus CCE9901 7404 1597 0.22 436114 Sulfurihydrogenibium sp. YO3AOP1 1712 568 0.33 436308 Nitrosopumilus maritimus SCM1 1797 361 0.20 436717 Acinetobacter sp. DR1 3879 1108 0.29 436907 Vanderwaltozyma polyspora DSM 70294 5353 1746 0.33 438753 Azorhizobium caulinodans ORS 571 4710 1473 0.31 439235 Desulfatibacillum alkenivorans AK-01 5198 1233 0.24 439292 Bacillus selenitireducens MLS10 3231 994 0.31 439375 Ochrobactrum anthropi ATCC 49188 4765 1461 0.31 439386 Sulfolobus islandicus Y.G.57.14 2878 489 0.17 439481 Aciduliprofundum boonei T469 3205 697 0.22 439843 Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 4602 1625 0.35 439851 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 4606 1611 0.35 439855 Escherichia coli SMS-3-5 4876 1763 0.36 440085 Methylobacterium chloromethanicum CM4 5491 1386 0.25 440266 WU Polyomavirus 262 21 0.08 441375 Cryptosporidium muris RN66 3930 831 0.21 441620 Methylobacterium populi BJ001 5325 1398 0.26 441768 Acholeplasma laidlawii PG-8A 1380 428 0.31 441770 Clostridium botulinum A str. ATCC 19397 3546 1001 0.28 441771 Clostridium botulinum A str. Hall 4237 1171 0.28 441772 Clostridium botulinum F str. Langeland 3655 1029 0.28 441952 Francisella tularensis subsp. mediasiatica FSC147 1388 521 0.38 441959 Talaromyces stipitatus ATCC 10500 12996 2918 0.22 441960 Penicillium marneffei ATCC 18224 10444 2688 0.26 442493 Enterococcus phage phiEF24C 221 8 0.04 442563 Bifidobacterium animalis subsp. lactis AD011 1525 463 0.30 442736 Bat coronavirus HKU3 12 11 0.92 443143 Geobacter sp. M18 4407 1299 0.29 443144 Geobacter sp. M21 4069 1195 0.29 443226 Coccidioides posadasii str. Silveira 10212 1882 0.18 443239 Human coronavirus HKU1 (isolate N1) 9 8 0.89 443240 Human coronavirus HKU1 (isolate N2) 9 8 0.89 443241 Human coronavirus HKU1 (isolate N5) 9 8 0.89 443906 Clavibacter michiganensis subsp. michiganensis NCPPB 382 3078 777 0.25 444157 Thermoproteus neutrophilus V24Sta 1965 380 0.19 444158 Methanococcus maripaludis C6 1825 413 0.23 444177 Lysinibacillus sphaericus C3-41 4751 1179 0.25 444178 Brucella ovis ATCC 25840 2820 945 0.34 444179 Candidatus Sulcia muelleri GWSS 227 127 0.56 444318 Influenza A virus (A/Texas/1/1977(H3N2)) 4 4 1.00 444450 Escherichia coli O157:H7 str. EC4115 5279 1710 0.32 445790 Rabies virus India 5 5 1.00 445791 Rabies virus China/MRV 5 5 1.00 445792 Rabies virus China/DRV 5 5 1.00 445793 Rabies virus silver-haired bat-associated SHBRV 5 5 1.00 445932 Elusimicrobium minutum Pei191 1528 438 0.29 445985 Borrelia burgdorferi ZS7 1232 331 0.27 446462 Actinosynnema mirum DSM 43827 6912 1427 0.21 446465 Brachybacterium faecium DSM 4810 3063 860 0.28 446466 Cellulomonas flavigena DSM 20109 3673 873 0.24 446468 Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 5497 1215 0.22 446469 Sanguibacter keddieii DSM 10542 3710 1042 0.28 446470 Stackebrandtia nassauensis DSM 44728 6379 1421 0.22 446471 Xylanimonas cellulosilytica DSM 15894 3441 871 0.25 446561 Australian bat lyssavirus bat/AUS/1996 5 5 1.00 446562 Australian bat lyssavirus human/AUS/1998 5 5 1.00 447093 Ajellomyces capsulatus G186AR 9214 1839 0.20 447217 Anaeromyxobacter sp. K 4444 1192 0.27 448385 Sorangium cellulosum 'So ce 56' 9320 1572 0.17 449447 Microcystis aeruginosa NIES-843 5988 845 0.14 450149 Simian rotavirus A/SA11-H96 12 11 0.92 450851 Phenylobacterium zucineum HLK1 3838 1139 0.30 451516 Staphylococcus aureus subsp. aureus USA300_TCH1516 2694 813 0.30 451804 Aspergillus fumigatus A1163 9923 2540 0.26 452471 Candidatus Amoebophilus asiaticus 5a2 1253 341 0.27 452637 Opitutus terrae PB90-1 4588 1212 0.26 452638 Polynucleobacter necessarius subsp. necessarius STIR1 1507 523 0.35 452659 Rickettsia rickettsii str. Iowa 1384 405 0.29 452662 Sphingobium japonicum UT26S 4347 1084 0.25 452863 Arthrobacter chlorophenolicus A6 4587 1048 0.23 453115 European bat lyssavirus 1 strain RV9 5 5 1.00 453116 European bat lyssavirus 2 strain RV1333 5 5 1.00 453457 Hirame rhabdovirus Korea/CA 9703/1997 6 5 0.83 453591 Ignicoccus hospitalis KIN4/I 1434 289 0.20 454166 Salmonella enterica subsp. enterica serovar Agona str. SL483 4592 1637 0.36 454169 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 4757 1657 0.35 455434 Treponema pallidum subsp. pallidum SS14 1028 355 0.35 455488 Anaeromyxobacter dehalogenans 2CP-1 4460 1181 0.26 455632 Streptomyces griseus subsp. griseus NBRC 13350 7008 1550 0.22 455880 Influenza A virus (A/Texas/UR06-0195/2007(H1N1)) 11 10 0.91 456320 Methanococcus voltae A3 1658 372 0.22 456442 Methanoregula boonei 6A8 2450 547 0.22 456481 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 3730 906 0.24 457570 Natranaerobius thermophilus JW/NM-WN-LF 2847 769 0.27 458233 Macrococcus caseolyticus JCSC5402 2059 633 0.31 458234 Francisella tularensis subsp. holarctica FTNF002-00 1515 522 0.34 458817 Shewanella halifaxensis HAW-EB4 4276 1412 0.33 460265 Methylobacterium nodulans ORS 2060 8130 1654 0.20 465515 Micrococcus luteus NCTC 2665 2207 595 0.27 469008 Escherichia coli BL21(DE3) 4848 1831 0.38 469371 Thermobispora bispora DSM 43833 3545 866 0.24 469382 Halogeometricum borinquense DSM 11551 3894 705 0.18 469383 Conexibacter woesei DSM 14684 5912 1402 0.24 470137 Brucella suis ATCC 23445 3226 985 0.31 470422 Human hepatitis A virus Hu/Germany/GBM/1976 1 1 1.00 470423 Human hepatitis A virus Hu/China/H2/1982 1 1 1.00 470424 Human hepatitis A virus Hu/Arizona/HAS-15/1979 1 1 1.00 470591 Human hepatitis A virus Hu/France/CF-53/1979 1 1 1.00 470592 Human hepatitis A virus Hu/Sierra Leone/SLF88/1988 1 1 1.00 470593 Human hepatitis A virus Hu/Norway/NOR-21/1998 1 1 1.00 471223 Geobacillus sp. WCH70 3048 805 0.26 471472 Chlamydia trachomatis 434/Bu 887 334 0.38 471473 Chlamydia trachomatis L2b/UCH-1/proctitis 883 329 0.37 471821 uncultured Termite group 1 bacterium phylotype Rs-D17 767 298 0.39 471852 Thermomonospora curvata DSM 43183 4888 921 0.19 471853 Beutenbergia cavernae DSM 12333 4195 1097 0.26 471854 Dyadobacter fermentans DSM 18053 5703 1317 0.23 471855 Slackia heliotrinireducens DSM 20476 2750 624 0.23 471856 Jonesia denitrificans DSM 20603 2495 720 0.29 471857 Saccharomonospora viridis DSM 43017 3828 820 0.21 471876 Streptococcus pyogenes NZ131 1700 571 0.34 472759 Nitrosococcus halophilus Nc4 3770 978 0.26 474186 Enterococcus faecalis OG1RF 2583 823 0.32 474341 Human hepatitis A virus Hu/Japan/HAJ85-1/1985 1 1 1.00 475494 Influenza A virus (A/equine/Lexington/1/1966(H7N7)) 11 8 0.73 475778 Avian encephalomyelitis virus strain Calnek 1 1 1.00 475779 Avian encephalomyelitis virus strain Van Reokel 1 1 1.00 475780 Avian encephalomyelitis virus strain L2Z 1 1 1.00 476213 Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 4601 1618 0.35 477974 Candidatus Desulforudis audaxviator MP104C 2136 561 0.26 478009 Halobacterium salinarum R1 2615 526 0.20 478434 Mycobacterium tuberculosis KZN 1435 4024 768 0.19 478555 Beet yellows virus isolate Ukraine 8 8 1.00 478801 Kytococcus sedentarius DSM 20547 2531 642 0.25 479431 Nakamurella multipartita DSM 44233 5123 1077 0.21 479432 Streptosporangium roseum DSM 43021 8955 1948 0.22 479433 Catenulispora acidiphila DSM 44928 8912 1787 0.20 479434 Sphaerobacter thermophilus DSM 20745 3471 812 0.23 479435 Kribbella flavida DSM 17836 6940 1497 0.22 479436 Veillonella parvula DSM 2008 1843 592 0.32 480116 Hepatitis B virus adw2/Rutter/1979 5 4 0.80 480119 Acinetobacter baumannii AB0057 3732 1042 0.28 480224 Chloroflexus sp. Y-400-fl 4153 940 0.23 481448 Methylacidiphilum infernorum V4 2498 555 0.22 481743 Paenibacillus sp. Y412MC10 6237 1893 0.30 481805 Escherichia coli ATCC 8739 4173 1696 0.41 481877 Enterocytozoon bieneusi H348 3311 704 0.21 482133 Hepatitis B virus adr/Japan/Nishioka/1983 9 6 0.67 482134 Hepatitis B virus adw/Japan/Nishioka/1983 5 4 0.80 482235 Candidatus Phytoplasma mali AT 447 193 0.43 482561 Paracoccidioides brasiliensis Pb03 7872 1697 0.22 482820 Lake Victoria marburgvirus - Ozolin 7 7 1.00 483179 Brucella canis ATCC 23365 3238 985 0.30 483219 Myxococcus fulvus HW-1 7262 1408 0.19 484019 Thermosipho africanus TCF52B 1918 584 0.30 484022 Francisella philomiragia subsp. philomiragia ATCC 25017 1881 645 0.34 485914 Halomicrobium mukohataei DSM 12286 3343 617 0.18 485917 Pedobacter heparinus DSM 2366 4249 1088 0.26 485918 Chitinophaga pinensis DSM 2588 7179 1621 0.23 486041 Laccaria bicolor S238N-H82 17895 2008 0.11 486275 Torque teno virus Human/Japan/TRM1/1999 4 1 0.25 486276 Torque teno virus Human/Germany/KAV/2001 3 1 0.33 486277 Torque teno virus Human/Japan/SANBAN/1999 2 1 0.50 486278 Torque teno virus Human/China/CT23F/2001 4 1 0.25 486279 Torque teno virus Human/China/CT39F/2001 4 1 0.25 486280 Torque teno virus VT416 3 1 0.33 486281 Torque teno virus Chimpanzee/Japan/Pt-TTV6/2000 2 1 0.50 486282 Torque teno virus Japanese macaque/Japan/Mf-TTV9/2000 3 1 0.33 486410 Streptococcus dysgalactiae subsp. equisimilis GGS_124 2090 651 0.31 486492 Chicken anemia virus Australia/CAU269-7/2000 3 2 0.67 487067 Torque teno virus Human/Ghana/GH1/1996 3 1 0.33 487099 Uukuniemi virus S23 4 2 0.50 487213 Streptococcus pneumoniae Taiwan19F-14 2034 627 0.31 487214 Streptococcus pneumoniae Hungary19A-6 2152 631 0.29 488221 Streptococcus pneumoniae 70585 2178 638 0.29 488222 Streptococcus pneumoniae JJA 2120 631 0.30 488223 Streptococcus pneumoniae P1031 2068 617 0.30 488241 Influenza A virus (A/Korea/426/1968(H2N2)) 23 18 0.78 489449 Hepatitis B virus adw2/Southern-Africa/Cai 1 1 1.00 489454 Hepatitis B virus genotype A1 subtype adw2 (Isolate South Africa/84/2001) 5 4 0.80 489457 Hepatitis B virus genotype A2 (Isolate Japan/11D11HCCW/1998) 5 4 0.80 489458 Hepatitis B virus genotype A3 (Isolate Cameroon/CMR983/1994) 5 4 0.80 489459 Hepatitis B virus genotype A3 (Isolate Cameroon/CMR711/1994) 5 4 0.80 489461 Hepatitis B virus Vietnam/9873/1997 5 3 0.60 489462 Hepatitis B virus Vietnam/16091/1992 6 3 0.50 489463 Hepatitis B virus adw/China/patient4/1996 5 3 0.60 489464 Hepatitis B virus Japan/Yamagata-2/1998 5 3 0.60 489465 Hepatitis B virus Japan/Ry30/2002 5 3 0.60 489467 Hepatitis B virus ar/Japan/S-207/1988 5 4 0.80 489468 Hepatitis B virus ad/Japan/S-179/1988 4 3 0.75 489469 Hepatitis B virus ayw/China/Tibet127/2002 5 4 0.80 489470 Hepatitis B virus adr/Japan/A4/1994 4 3 0.75 489471 Hepatitis B virus ayw/Australia/AustRC/1992 5 3 0.60 489472 Hepatitis B virus Vietnam/3270/2000 5 4 0.80 489487 Hepatitis B virus ayw/Japan/JYW796/1988 5 3 0.60 489488 Hepatitis B virus ayw/Australia/AustKW/1991 5 4 0.80 489489 Hepatitis B virus ayw/Italy/CI/1992 5 4 0.80 489490 Hepatitis B virus Germany/1-91/1991 6 5 0.83 489495 Hepatitis B virus ayw4/Kou 4 2 0.50 489496 Hepatitis B virus Cote d'Ivoire/ABI-129/2003 4 2 0.50 489497 Hepatitis B virus Chimpanzee/Ch195/1999 4 2 0.50 489498 Hepatitis B virus Cote d'Ivoire/ABI-212/2003 4 2 0.50 489499 Hepatitis B virus adw4/El Salvador/1116Sal/1997 4 2 0.50 489500 Hepatitis B virus Argentina/sa11/2000 5 2 0.40 489501 Hepatitis B virus Argentina/sa16/2000 5 2 0.40 489503 Hepatitis B virus adw4q/Senegal/9203 5 4 0.80 489537 Hepatitis B virus United states/USG17/2002 4 3 0.75 489538 Hepatitis B virus IG29227/2000 4 3 0.75 489539 Hepatitis B virus United States/LAS2523/2002 4 2 0.50 489540 Hepatitis B virus adw4/Nicaragua/1853Nic/1997 4 2 0.50 489541 Hepatitis B virus adw4/Nicaragua/2928Nic/1997 5 4 0.80 489542 Hepatitis B virus duck/DHBV-3 4 3 0.75 489543 Hepatitis B virus duck/DHBV-16 5 4 0.80 489544 Hepatitis B virus ayw3q/gibbon/Hope 5 4 0.80 489545 Hepatitis B virus Orangutan/Somad 4 2 0.50 489546 Hepatitis B virus gorilla/Cameroon/gor97 5 4 0.80 489653 Neisseria lactamica 020-06 1961 640 0.33 490133 Hepatitis B virus ayw/France/Tiollais/1979 7 4 0.57 490134 Hepatitis B virus Woolly monkey/Louisville 5 4 0.80 490899 Desulfurococcus kamchatkensis 1221n 1470 304 0.21 491077 Lactobacillus reuteri SD2112 2201 602 0.27 491915 Anoxybacillus flavithermus WK1 2819 815 0.29 491916 Rhizobium etli CIAT 652 6051 1712 0.28 491952 Marinomonas posidonica IVIA-Po-181 3489 1229 0.35 492094 Petunia vein clearing virus isolate Shepherd 1 0 0.00 492095 Petunia vein clearing virus isolate Hohn 1 0 0.00 498211 Cellvibrio japonicus Ueda107 3711 1160 0.31 498213 Clostridium botulinum B1 str. Okra 3844 1037 0.27 498214 Clostridium botulinum A3 str. Loch Maree 3981 1056 0.27 498217 Edwardsiella tarda EIB202 3568 1299 0.36 498761 Heliobacterium modesticaldum Ice1 2922 733 0.25 499177 Clostridium sticklandii DSM 519 2572 768 0.30 499556 Chapare virus 4 4 1.00 500485 Penicillium chrysogenum Wisconsin 54-1255 12773 2693 0.21 500578 Bean common mosaic necrosis virus NL-3 2 2 1.00 502025 Haliangium ochraceum DSM 14365 6684 1193 0.18 502779 Paracoccidioides brasiliensis Pb01 9116 1712 0.19 502780 Paracoccidioides brasiliensis Pb18 8750 1714 0.20 502800 Yersinia pseudotuberculosis YPIII 4171 1492 0.36 502801 Yersinia pseudotuberculosis PB1/+ 4213 1526 0.36 504474 Corynebacterium urealyticum DSM 7109 2011 535 0.27 504832 Oligotropha carboxidovorans OM5 4643 1257 0.27 505682 Ureaplasma parvum serovar 3 str. ATCC 27815 609 238 0.39 506350 Influenza A virus (A/Hong Kong/1/1968(H3N2)) 29 25 0.86 507522 Klebsiella pneumoniae 342 5738 1924 0.34 508765 Clostridium botulinum B str. Eklund 17B 3473 879 0.25 508767 Clostridium botulinum E3 str. Alaska E43 3254 900 0.28 509169 Xanthomonas campestris pv. campestris str. B100 4410 1252 0.28 509170 Acinetobacter baumannii SDF 2767 771 0.28 509173 Acinetobacter baumannii AYE 3652 1047 0.29 509190 Caulobacter segnis ATCC 21756 4136 1200 0.29 509615 Hepatitis E virus US2 3 2 0.67 509627 Hepatitis E virus Ct1 3 2 0.67 510516 Aspergillus oryzae RIB40 12059 2921 0.24 511437 Lactobacillus buchneri NRRL B-30929 2361 694 0.29 511691 Streptococcus mutans NN2025 1892 623 0.33 511995 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 847 311 0.37 512345 Hepatitis E virus swine/g3/United States/swUS1 3 2 0.67 512346 Hepatitis E virus human/g1/India/Hyderabad 3 2 0.67 512562 Helicobacter pylori Shi470 1564 489 0.31 512566 Streptococcus pneumoniae G54 2106 635 0.30 515618 Candidatus Riesia pediculicola USDA 540 247 0.46 515619 Eubacterium rectale ATCC 33656 3546 806 0.23 515620 Eubacterium eligens ATCC 27750 2763 717 0.26 515621 Clostridium botulinum Ba4 str. 657 3977 1016 0.26 515635 Dictyoglomus turgidum DSM 6724 1743 535 0.31 515849 Podospora anserina S mat+ 10628 2226 0.21 516950 Streptococcus pneumoniae CGSP14 2193 636 0.29 516993 Avian hepatitis E virus chicken/United States/Meng 3 2 0.67 517417 Chlorobaculum parvum NCIB 8327 2044 607 0.30 517418 Chloroherpeton thalassium ATCC 35110 2708 726 0.27 518766 Rhodothermus marinus DSM 4252 2861 785 0.27 518998 Influenza A virus (A/Nymc X-163(Nymc X-157-St. Petersburg/8/2006)(H1N1)) 11 10 0.91 519441 Streptobacillus moniliformis DSM 12112 1431 469 0.33 519442 Halorhabdus utahensis DSM 12940 3001 559 0.19 521006 Neisseria gonorrhoeae NCCP11945 2595 642 0.25 521007 Borrelia burgdorferi N40 1236 340 0.28 521008 Borrelia burgdorferi JD1 1360 338 0.25 521010 Borrelia bissettii DN127 1403 340 0.24 521011 Methanosphaerula palustris E1-9c 2655 564 0.21 521045 Kosmotoga olearia TBF 19.5.1 2100 572 0.27 521095 Atopobium parvulum DSM 20469 1353 449 0.33 521096 Tsukamurella paurometabola DSM 20162 4170 904 0.22 521097 Capnocytophaga ochracea DSM 7271 2172 549 0.25 521098 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 3059 825 0.27 521460 Caldicellulosiruptor bescii DSM 6725 2652 667 0.25 522373 Stenotrophomonas maltophilia K279a 4369 1670 0.38 522772 Denitrovibrio acetiphilus DSM 12809 2901 939 0.32 523791 Kangiella koreensis DSM 16069 2630 845 0.32 523794 Leptotrichia buccalis C-1013-b 2218 576 0.26 523796 Staphylococcus aureus subsp. aureus ST398 2673 839 0.31 523846 Methanothermus fervidus DSM 2088 1283 321 0.25 523850 Thermococcus onnurineus NA1 1978 459 0.23 524364 Norovirus Hu/1968/US 3 3 1.00 525146 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 2345 769 0.33 525897 Desulfomicrobium baculatum DSM 4028 3423 1112 0.32 525898 Sulfurospirillum deleyianum DSM 6946 2243 788 0.35 525903 Thermanaerovibrio acidaminovorans DSM 6589 1737 604 0.35 525904 Thermobaculum terrenum ATCC BAA-798 2827 731 0.26 525909 Acidimicrobium ferrooxidans DSM 10331 1936 555 0.29 526218 Sebaldella termitidis ATCC 33386 4124 905 0.22 526221 Verticillium albo-atrum VaMs.102 10233 2228 0.22 526222 Desulfovibrio salexigens DSM 2638 3809 1255 0.33 526225 Geodermatophilus obscurus DSM 43160 4795 991 0.21 526226 Gordonia bronchialis DSM 43247 4630 915 0.20 529507 Proteus mirabilis HI4320 3661 1282 0.35 530564 Pirellula staleyi DSM 6068 4711 840 0.18 531844 Flavobacteriaceae bacterium 3519-10 2533 628 0.25 535289 Acidovorax ebreus TPSY 3461 1161 0.34 535722 Arthroderma gypseum CBS 118893 8907 1974 0.22 536056 Escherichia coli DH1 4593 1785 0.39 536232 Clostridium botulinum A2 str. Kyoto 3860 1033 0.27 537021 Candidatus Liberibacter asiaticus str. psy62 1102 409 0.37 537457 Actinobacillus pleuropneumoniae serovar 7 str. AP76 2114 835 0.39 543526 Haloterrigena turkmenica DSM 5511 5116 829 0.16 543728 Variovorax paradoxus S110 6272 1859 0.30 543734 Lactobacillus casei BL23 3000 838 0.28 543939 Sputnik virophage 21 5 0.24 544404 Escherichia coli O157:H7 str. TW14359 5255 1745 0.33 544556 Geobacillus sp. Y412MC61 3414 939 0.28 544711 Ajellomyces capsulatus H88 9446 1823 0.19 544712 Ajellomyces capsulatus H143 9545 1750 0.18 545124 Saccharomyces cerevisiae AWRI1631 5450 1464 0.27 545693 Bacillus megaterium QM B1551 5606 1458 0.26 546272 Brucella melitensis ATCC 23457 3125 981 0.31 546342 Staphylococcus aureus subsp. aureus str. JKD6008 2652 822 0.31 546414 Deinococcus deserti VCD115 3452 858 0.25 547558 Methanohalophilus mahii DSM 5219 1986 470 0.24 547559 Natrialba magadii ATCC 43099 4213 675 0.16 548473 Staphylococcus aureus subsp. aureus TCH60 2693 833 0.31 548476 Corynebacterium aurimucosum ATCC 700975 2509 628 0.25 550537 Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 4198 1667 0.40 550538 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 3953 1576 0.40 550540 Ferrimonas balearica DSM 9799 3781 1288 0.34 552526 Streptococcus equi subsp. zooepidemicus MGCS10565 1861 606 0.33 552531 Bifidobacterium animalis subsp. lactis BB-12 1641 459 0.28 552536 Listeria monocytogenes HCC23 2972 897 0.30 552811 Dehalogenimonas lykanthroporepellens BL-DC-9 1619 445 0.27 553199 Propionibacterium acnes SK137 2347 659 0.28 553480 Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 4393 1232 0.28 553482 Streptococcus equi subsp. equi 4047 1916 596 0.31 553483 Steptococcus equi subsp. zooepidemicus H70 1851 619 0.33 554155 Arthroderma otae CBS 113480 8764 1976 0.23 554290 Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 4275 1599 0.37 554373 Moniliophthora perniciosa FA553 13649 1512 0.11 555079 Thermosediminibacter oceani DSM 16646 2151 661 0.31 555217 Zymomonas mobilis subsp. mobilis ATCC 10988 1777 614 0.35 555311 Sulfolobus solfataricus 98/2 2661 486 0.18 555778 Halothiobacillus neapolitanus c2 2353 793 0.34 555970 Bifidobacterium animalis subsp. lactis DSM 10140 1565 471 0.30 556484 Phaeodactylum tricornutum CCAP 1055/1 10465 2084 0.20 557433 Lactobacillus reuteri JCM 1112 1792 570 0.32 557436 Lactobacillus reuteri DSM 20016 1872 572 0.31 557598 Laribacter hongkongensis HLHK9 3208 1055 0.33 557600 Acinetobacter baumannii AB307-0294 3452 1016 0.29 557722 Pseudomonas aeruginosa LESB58 5908 1882 0.32 557723 Haemophilus parasuis SH0165 2002 707 0.35 557760 Rhodobacter sphaeroides KD131 4542 1319 0.29 559292 Saccharomyces cerevisiae S288c 6627 6114 0.92 559295 Lachancea thermotolerans CBS 6340 5093 1632 0.32 559297 Ajellomyces dermatitidis ER-3 9539 1900 0.20 559298 Ajellomyces dermatitidis SLH14081 9587 1916 0.20 559307 Zygosaccharomyces rouxii CBS 732 4987 1577 0.32 561007 Mycobacterium abscessus ATCC 19977 4945 908 0.18 561229 Dickeya zeae Ech1591 4138 1466 0.35 561230 Pectobacterium carotovorum subsp. carotovorum PC1 4245 1616 0.38 561231 Pectobacterium wasabiae WPP163 4435 1551 0.35 561275 Mycobacterium bovis BCG str. Tokyo 172 3906 845 0.22 561276 Streptococcus pneumoniae ATCC 700669 1985 643 0.32 561304 Mycobacterium leprae Br4923 1599 438 0.27 561443 African swine fever virus tick/South Africa/Pretoriuskop Pr4/1996 159 57 0.36 561444 African swine fever virus warthog/Namibia/Wart80/1980 160 59 0.37 561445 African swine fever virus pig/Kenya/KEN-50/1950 160 57 0.36 561501 Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) 553 341 0.62 561896 Postia placenta Mad-698-R 8983 1098 0.12 562019 Rickettsia peacockii str. Rustic 927 384 0.41 562970 Kyrpidia tusciae DSM 2912 3135 806 0.26 563041 Helicobacter pylori G27 1501 484 0.32 563178 Buchnera aphidicola str. 5A (Acyrthosiphon pisum) 555 344 0.62 565034 Brachyspira hyodysenteriae WA1 2652 681 0.26 565042 Bifidobacterium longum subsp. longum JCM 1217 1908 544 0.29 565050 Caulobacter crescentus NA1000 3853 1062 0.28 565575 Ureaplasma urealyticum serovar 10 str. ATCC 33699 646 237 0.37 566546 Escherichia coli W 4925 1775 0.36 568206 Bacillus anthracis str. CDC 684 5895 1412 0.24 568703 Lactobacillus rhamnosus GG 3239 878 0.27 568704 Lactobacillus rhamnosus Lc 705 2952 834 0.28 568708 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 4546 1676 0.37 568813 Streptococcus suis SC84 1887 605 0.32 568814 Streptococcus suis BM407 1922 611 0.32 568819 Listeria monocytogenes serotype 4b str. CLIP 80459 2765 912 0.33 570417 Wolbachia endosymbiont of Culex quinquefasciatus Pel 1161 356 0.31 570508 Helicobacter pylori P12 1572 501 0.32 572263 Mycoplasma conjunctivae HRC/581 695 213 0.31 572264 Bacillus cereus 03BB102 5598 1377 0.25 572265 Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) 2045 600 0.29 572477 Allochromatium vinosum DSM 180 3223 1100 0.34 572478 Vulcanisaeta distributa DSM 14429 2493 434 0.17 572480 Arcobacter nitrofigilis DSM 7299 3125 1040 0.33 572544 Ilyobacter polytropus DSM 2926 2859 826 0.29 572546 Archaeoglobus profundus DSM 5631 1824 377 0.21 572547 Aminobacterium colombiense DSM 12261 1872 597 0.32 573061 Clostridium cellulovorans 743B 4211 1051 0.25 573063 Methanocaldococcus infernus ME 1440 354 0.25 573064 Methanocaldococcus fervens AG86 1581 363 0.23 573235 Escherichia coli O26:H11 str. 11368 5326 1785 0.34 573370 Desulfovibrio magneticus RS-1 4663 1280 0.27 573413 Spirochaeta smaragdinae DSM 11293 4212 1296 0.31 573569 Francisella sp. TX077308 1976 660 0.33 573826 Candida dubliniensis CD36 5828 1742 0.30 574087 Acetohalobium arabaticum DSM 5501 2276 697 0.31 574521 Escherichia coli O127:H6 str. E2348/69 4594 1640 0.36 574961 Saccharomyces cerevisiae JAY291 5193 1641 0.32 575788 Vibrio splendidus LGP32 4420 1520 0.34 578458 Schizophyllum commune H4-8 13128 2110 0.16 578460 Nosema ceranae BRL01 2060 437 0.21 578827 Human rotavirus A64 G10P11 12 11 0.92 578828 Rotavirus A cow/USA/WC3/1981 G6P7[5] 12 11 0.92 578829 Rotavirus A human/JPN/KUN/1980 G2P1B[4] 3 3 1.00 578830 Rotavirus A Hu/WI61/1983/G9P1A[8] 12 10 0.83 578831 Rotavirus A human/USA/D/1974 G1P1A[8] 12 10 0.83 578832 Rotavirus A human/JPN/YO/1977 G3P1A[8] 7 7 1.00 578834 Rotavirus A human/USA/M/1976 G3 4 3 0.75 578843 Rotavirus A human/BEL/4106/2000 G3P11[14] 12 11 0.92 579112 Vibrio cholerae M66-2 3652 1337 0.37 579137 Methanocaldococcus vulcanius M7 1740 368 0.21 579138 Zymomonas mobilis subsp. pomaceae ATCC 29192 1740 611 0.35 579405 Dickeya dadantii Ech703 3967 1496 0.38 580049 Chlamydia trachomatis B/Jali20/OT 883 330 0.37 580050 Bifidobacterium animalis subsp. lactis Bl-04 1566 473 0.30 580327 Thermoanaerobacterium thermosaccharolyticum DSM 571 2583 747 0.29 582402 Hirschia baltica ATCC 49814 3187 953 0.30 582744 Methylovorus glucosetrophus SIP3-4 2907 982 0.34 583345 Methylotenera mobilis JLW8 2334 895 0.38 583346 Clostridium kluyveri NBRC 12016 3496 929 0.27 583356 Ignisphaera aggregans DSM 17230 1929 350 0.18 585034 Escherichia coli IAI1 4330 1663 0.38 585035 Escherichia coli S88 4805 1724 0.36 585054 Escherichia fergusonii ATCC 35469 4311 1597 0.37 585055 Escherichia coli 55989 4797 1711 0.36 585056 Escherichia coli UMN026 4975 1779 0.36 585057 Escherichia coli IAI39 4554 1693 0.37 585395 Escherichia coli O103:H2 str. 12009 4964 1716 0.35 585396 Escherichia coli O111:H- str. 11128 5238 1781 0.34 585397 Escherichia coli ED1a 4940 1684 0.34 587200 Variola virus human/India/Ind3/1967 199 100 0.50 588858 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 5369 1705 0.32 589924 Ferroglobus placidus DSM 10642 2463 463 0.19 590409 Dickeya dadantii Ech586 4148 1512 0.36 590998 Cellulomonas fimi ATCC 484 3761 975 0.26 591001 Acidaminococcus fermentans DSM 20731 2016 619 0.31 591020 Shigella flexneri 2002017 4456 1466 0.33 592021 Bacillus anthracis str. A0248 5291 1302 0.25 592022 Bacillus megaterium DSM 319 5100 1400 0.27 592205 Helicobacter pylori B38 1369 488 0.36 592316 Pantoea sp. At-9b 5760 1984 0.34 593117 Thermococcus gammatolerans EJ3 2159 462 0.21 593588 Vibrio cholerae MJ-1236 3695 1356 0.37 595494 Tolumonas auensis DSM 9187 3126 1103 0.35 595495 Escherichia coli KO11FL 4637 1706 0.37 595496 Escherichia coli BW2952 4042 1617 0.40 595499 Candidatus Sulcia muelleri SMDSEM 242 134 0.55 595537 Variovorax paradoxus EPS 5937 1689 0.28 598659 Nautilia profundicola AmH 1730 609 0.35 598745 Giardia intestinalis ATCC 50581 4466 577 0.13 600809 Blattabacterium sp. (Periplaneta americana) str. BPLAN 581 271 0.47 604354 Thermococcus sibiricus MM 739 2037 443 0.22 608538 Hydrogenobacter thermophilus TK-6 2039 595 0.29 610130 Clostridium saccharolyticum WM1 4133 1196 0.29 622759 Zymomonas mobilis subsp. mobilis NCIMB 11163 1885 631 0.33 632772 Rhodococcus opacus B4 8170 1516 0.19 633147 Olsenella uli DSM 7084 1739 561 0.32 633148 Thermosphaera aggregans DSM 11486 1387 300 0.22 634176 Aggregatibacter aphrophilus NJ8700 2246 771 0.34 634452 Acetobacter pasteurianus IFO 3283-01 2906 776 0.27 634464 Chlamydia trachomatis Sweden2 882 328 0.37 634498 Methanobrevibacter ruminantium M1 2209 433 0.20 634499 Erwinia pyrifoliae Ep1/96 3619 1272 0.35 634500 Erwinia billingiae Eb661 4915 1717 0.35 634503 Edwardsiella ictaluri 93-146 3725 1194 0.32 634504 Bartonella grahamii as4aup 1709 549 0.32 637381 Listeria monocytogenes 08-5923 2961 925 0.31 637382 Yersinia pestis D106004 3642 1456 0.40 637385 Yersinia pestis D182038 3632 1438 0.40 637386 Yersinia pestis Z176003 3546 1407 0.40 637905 Shewanella violacea DSS12 4336 1301 0.30 637909 Streptococcus gallolyticus UCN34 2216 712 0.32 637910 Citrobacter rodentium ICC168 4792 1727 0.36 638303 Thermocrinis albus DSM 14484 1592 556 0.35 639283 Starkeya novella DSM 506 4424 1359 0.31 640131 Klebsiella variicola At-22 5056 1893 0.37 640132 Segniliparus rotundus DSM 44985 3001 600 0.20 640511 Burkholderia sp. CCGE1002 6866 1982 0.29 641892 Candidatus Sulcia muelleri DMIN 226 124 0.55 643680 Saccharomyces cerevisiae EC1118 5983 1724 0.29 644042 Lactobacillus plantarum JDM1 2948 905 0.31 644223 Komagataella pastoris GS115 5072 1589 0.31 644281 Methanocaldococcus sp. FS406-22 1815 386 0.21 644282 Desulfarculus baarsii DSM 2075 3270 921 0.28 644284 Arcanobacterium haemolyticum DSM 20595 1720 508 0.30 644295 Methanohalobium evestigatum Z-7303 2250 472 0.21 644440 Infectious bursal disease virus chicken/UK/UK661/1989 3 3 1.00 644639 Duck hepatitis B virus isolate DHBVQCA34 4 3 0.75 644651 Erwinia pyrifoliae DSM 12163 3946 1273 0.32 645098 Measles virus strain Ichinose-B95a 8 5 0.63 645099 Banana bunchy top virus isolate Autralia 7 4 0.57 645118 Infectious bursal disease virus chicken/Cuba/Soroa/1998 3 3 1.00 645127 Corynebacterium kroppenstedtii DSM 44385 2018 550 0.27 645133 Glomerella graminicola M1.001 12019 2544 0.21 645462 Clostridium difficile CD196 3453 1051 0.30 645463 Clostridium difficile R20291 3505 1060 0.30 647113 Methanothermococcus okinawensis IH1 1583 361 0.23 647331 Atkinsonella hypoxylon virus isolate 2H 2 1 0.50 647332 Human picobirnavirus strain Hy005102 3 2 0.67 648168 Colorado tick fever virus Florio N-7180 13 5 0.38 648169 Lymantria dispar cypovirus 1 isolate Rao 10 5 0.50 648170 Aedes pseudoscutellaris reovirus isolate France 9 4 0.44 648172 Fiji disease virus isolate Sugarcane 12 3 0.25 648234 American grass carp reovirus PB01-155 12 8 0.67 648235 Murine minute virus strain MVM prototype 7 2 0.29 648238 Human parvovirus B19 isolate AU 4 1 0.25 648242 Adeno-associated virus 2 Srivastava/1982 5 4 0.80 648243 Bovine parvovirus pAT153/1986 3 1 0.33 648250 Junonia coenia densovirus pBRJ/1990 4 1 0.25 648330 Aedes albopictus densovirus Boublik/1994 3 1 0.33 648757 Rhodomicrobium vannielii ATCC 17100 3513 958 0.27 649596 Micromonas pusilla reovirus (isolate Netherlands) 11 4 0.36 649603 Rice ragged stunt virus (isolate Thailand) 11 9 0.82 649604 Banna virus strain JKT-6423 12 9 0.75 649639 Bacillus cellulosilyticus DSM 2522 4253 1093 0.26 649893 Giardia lamblia virus isolate Wang 2 1 0.50 649895 Broad bean wilt virus 1 ATCC PV132 2 1 0.50 650130 Human rhinovirus 89 ATCC VR-1199 1 1 1.00 650137 Cherry rasp leaf virus isolate potato 2 2 1.00 650150 Erysipelothrix rhusiopathiae str. Fujisawa 1679 529 0.32 650481 Satsuma dwarf virus S-58 2 2 1.00 650482 Mushroom bacilliform virus LF-1/AUS 4 2 0.50 650488 Pelargonium zonate spot virus isolate tomato 4 3 0.75 650489 Olive latent virus 2 isolate Italy 4 3 0.75 651354 Grapevine leafroll-associated virus 3 isolate NY1 13 7 0.54 651355 Lettuce infectious yellows virus isolate 92 9 6 0.67 651356 Apple stem pitting virus PA66 5 4 0.80 651357 Indian citrus ringspot virus K1 6 4 0.67 651358 Grapevine virus A isolate Is 151 5 1 0.20 652104 Barley yellow mosaic virus isolate Yancheng 2 2 1.00 652105 Sweet potato mild mottle virus isolate Salazar 1 1 1.00 652106 Ryegrass mosaic virus isolate Danish 1 1 1.00 652108 Nudaurelia capensis beta virus isolate South Africa 2 1 0.50 652109 Pothos latent virus isolate pigeonpea 4 2 0.50 652110 Oat chlorotic stunt virus isolate United Kingdom 3 1 0.33 652111 Carnation mottle virus isolate Shanghai 4 2 0.50 652597 Carnation ringspot virus isolate Lommel 4 1 0.25 652599 Panicum mosaic virus strain Kansas 109S 5 4 0.80 652668 Grapevine fleck virus isolate MT48 4 2 0.50 652669 Maize rayado fino virus isolate Costa Rica 2 1 0.50 652670 Beet necrotic yellow vein virus S 9 6 0.67 652673 Soil-borne wheat mosaic virus strain Nebraska 5 3 0.60 652674 Hepatitis E virus isolate Hetian 3 2 0.67 652675 Raspberry bushy dwarf virus isolate R15 3 1 0.33 652837 Peanut clump virus 87/TGTA2 7 4 0.57 652838 Ourmia melon virus VE9 3 1 0.33 652839 Potato mop-top virus Sw 7 5 0.71 652938 Southern bean mosaic virus isolate Arkansas 4 3 0.75 652939 Tobacco rattle virus PpK20 6 2 0.33 652953 Newcastle disease virus B1/48 8 6 0.75 652954 Avian metapneumovirus 15a 9 8 0.89 652961 Crimean-Congo hemorrhagic fever virus strain IbAr10200 3 2 0.67 652962 Lettuce big-vein associated virus isolate Kagawa 6 2 0.33 652963 Citrus ringspot virus isolate P-121 4 2 0.50 652964 Mirafiori lettuce virus LS301-O 7 2 0.29 652965 Infectious salmon anemia virus isolate 810/9/99 10 4 0.40 653733 Desulfurispirillum indicum S5 2551 880 0.34 653938 Listeria monocytogenes 08-5578 3082 935 0.30 654901 Alcelaphine herpesvirus 1 strain C500 70 38 0.54 654903 Ostreid herpesvirus 1 (isolate France) 116 20 0.17 654904 Rachiplusia ou MNPV (strain R1) 149 21 0.14 654905 Cydia pomonella granulosis virus (isolate Mexican) 143 22 0.15 654908 Sulfolobus islandicus filamentous virus (isolate Hveragerdi) 73 9 0.12 654909 Acidianus filamentous virus 1 (isolate Yellowstone) 40 8 0.20 654910 Acidianus filamentous virus 2 (isolate Pozzuoli) 52 10 0.19 654911 Acidianus bottle-shaped virus (isolate Pozzuoli) 54 17 0.31 654912 His1 virus (isolate Victoria) 35 13 0.37 654913 Shrimp white spot syndrome virus (isolate Tongan) 531 2 0.00 654915 Mastomys natalensis papillomavirus (isolate African multimammate rat) 6 6 1.00 654919 Microplitis demolitor bracovirus (isolate Webb) 53 4 0.08 654922 Lymphocystis disease virus 1 (isolate Darai) 1 1 1.00 654924 Frog virus 3 (isolate Goorha) 98 15 0.15 654929 Porcine circovirus 1 (isolate China) 2 2 1.00 654931 Drosophila x virus (isolate Chung) 3 3 1.00 654932 Penicillium chrysogenum virus (isolate Caston) 4 1 0.25 654934 White clover cryptic virus 1 (isolate Boccardo) 2 1 0.50 655816 Bacillus subtilis subsp. spizizenii str. W23 4057 1154 0.28 655827 Metarhizium acridum CQMa 102 9830 2233 0.23 655844 Metarhizium anisopliae ARSEF 23 10581 2403 0.23 655863 Grosmannia clavigera kw1407 8311 2047 0.25 656061 Tuber melanosporum Mel28 7494 1683 0.22 658858 Giardia lamblia P15 4998 629 0.13 660122 Nectria haematococca mpVI 77-13-4 15680 3510 0.22 661367 Legionella longbeachae NSW150 3460 904 0.26 661410 Methylobacterium extorquens DM4 5715 1398 0.24 663202 Trichophyton verrucosum HKI 0517 8028 1754 0.22 663331 Arthroderma benhamiae CBS 112371 7978 1757 0.22 663917 Geobacter sulfurreducens KN400 3313 1061 0.32 663951 Staphylococcus aureus subsp. aureus TW20 2764 844 0.31 665029 Erwinia amylovora CFBP1430 3733 1280 0.34 665079 Sclerotinia sclerotiorum 1980 UF-70 14401 2151 0.15 665571 Spirochaeta thermophila DSM 6192 2199 696 0.32 666510 Acidilobus saccharovorans 345-15 1499 336 0.22 668336 Aggregatibacter actinomycetemcomitans D11S-1 2211 775 0.35 670426 Psittacid herpesvirus 1 Amazon parrot/1997 71 52 0.73 672161 Chlamydia trachomatis B/TZ1A828/OT 888 329 0.37 673322 Measles virus strain Shanghai-191 vaccine 1 1 1.00 679716 Trypanosoma brucei gambiense DAL972 9668 1343 0.14 679896 Corynebacterium pseudotuberculosis 1002 2090 583 0.28 679901 Methanosalsum zhilinae DSM 4017 1972 465 0.24 679926 Methanoplanus petrolearius DSM 11571 2779 578 0.21 680198 Streptomyces scabiei 87.22 8700 1702 0.20 680646 Rothia mucilaginosa DY-18 1991 486 0.24 681288 Staphylococcus aureus subsp. aureus ED98 2683 847 0.32 681645 Corynebacterium pseudotuberculosis C231 2090 580 0.28 683837 Listeria seeligeri serovar 1/2b str. SLCC3954 2710 857 0.32 684364 Batrachochytrium dendrobatidis JAM81 8610 1688 0.20 684738 Lactococcus lactis subsp. lactis KF147 2458 710 0.29 684950 Helicobacter pylori 52 1403 477 0.34 685038 Escherichia coli O83:H1 str. NRG 857C 4575 1710 0.37 685727 Rhodococcus equi 103S 4576 967 0.21 686943 Poinsettia latent virus isolate Germany/Siepen 4 3 0.75 686945 Lolium latent virus USA/US1 6 4 0.67 686946 Botrytis virus F NZL/Howitt 2 1 0.50 686947 Botrytis virus X NZL/Howitt 5 1 0.20 686948 Tomato torrado virus ESP/PRIToTV0301 3 2 0.67 686949 Blackberry virus Y USA/C3ARK 1 1 1.00 686950 Citrus leprosis virus C BRA/Cordeiropolis 6 3 0.50 686981 Citrus leaf blotch virus FRA/SRA-153 3 1 0.33 686987 Sclerotinia sclerotiorum debilitation-associated virus CHN/Xie 1 0 0.00 692420 Bacillus amyloliquefaciens DSM 7 3902 1071 0.27 693216 Cronobacter turicensis z3032 4466 1526 0.34 693977 Deinococcus proteolyticus MRP 2652 629 0.24 693979 Bacteroides helcogenes P 36-108 3241 865 0.27 693989 Pea enation mosaic virus-1 strain WSG 5 4 0.80 694006 Rousettus bat coronavirus HKU9 9 7 0.78 694007 Tylonycteris bat coronavirus HKU4 18 8 0.44 694008 Pipistrellus bat coronavirus HKU5 18 8 0.44 694067 Human metapneumovirus CAN97-83 9 8 0.89 696863 Spring viraemia of carp virus 178 132 0.74 697329 Ruminococcus albus 7 3776 669 0.18 698737 Staphylococcus lugdunensis HKU09-01 2456 785 0.32 701177 Escherichia coli O55:H7 str. CB9615 5085 1740 0.34 701347 Enterobacter cloacae SCF1 4393 1762 0.40 703339 Staphylococcus aureus 04-02981 2639 864 0.33 706191 Pantoea ananatis LMG 20103 4242 1564 0.37 710127 Mycoplasma gallisepticum str. R(low) 761 254 0.33 710128 Mycoplasma gallisepticum str. R(high) 763 240 0.31 710696 Intrasporangium calvum DSM 43043 3551 816 0.23 712898 Pantoea vagans C9-1 4590 1593 0.35 712938 Lactobacillus fermentum CECT 5716 1043 356 0.34 712961 Lactobacillus salivarius CECT 5713 1533 500 0.33 714962 Escherichia coli IHE3034 4748 1694 0.36 715451 Alteromonas sp. SN2 4343 1290 0.30 716540 Erwinia amylovora ATCC 49946 3563 1284 0.36 716541 Enterobacter cloacae subsp. cloacae ATCC 13047 5411 1866 0.34 717773 Thioalkalimicrobium cyclicum ALM1 1664 588 0.35 717774 Marinomonas mediterranea MMB-1 4118 1323 0.32 718219 Chlamydia trachomatis G/9301 921 327 0.36 718251 Edwardsiella tarda FL6-60 3251 1290 0.40 720555 Bacillus atrophaeus 1942 4186 1118 0.27 721032 Saccharomyces cerevisiae Kyokai no. 7 5776 1743 0.30 722438 Mycoplasma pneumoniae FH 629 217 0.34 741091 Rahnella sp. Y9602 5099 1780 0.35 743525 Thermus scotoductus SA-01 2448 648 0.26 743720 Pseudomonas fulva 12-X 4459 1553 0.35 746361 Lactococcus lactis subsp. cremoris NZ9000 2446 663 0.27 748671 Lactobacillus crispatus ST1 2003 635 0.32 749219 Moraxella catarrhalis RH4 1881 580 0.31 749414 Streptomyces bingchenggensis BCW-1 10019 2020 0.20 749927 Amycolatopsis mediterranei U32 9204 1828 0.20 754252 Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 2310 621 0.27 756982 Arthrobotrys oligospora ATCC 24927 11478 2055 0.18 757424 Herbaspirillum seropedicae SmR1 4732 1749 0.37 761659 Salinibacter ruber M8 3247 793 0.24 762051 Leuconostoc kimchii IMSNU 11154 2128 639 0.30 762376 Achromobacter xylosoxidans A8 6798 2084 0.31 762550 Leuconostoc gasicomitatum LMG 18811 1902 599 0.31 764097 Saccharomyces cerevisiae AWRI796 3760 1032 0.27 764098 Saccharomyces cerevisiae Lalvin QA23 4008 1145 0.29 764099 Saccharomyces cerevisiae Vin13 3916 1076 0.27 764100 Saccharomyces cerevisiae VL3 4014 1112 0.28 764101 Saccharomyces cerevisiae FostersO 3560 993 0.28 764102 Saccharomyces cerevisiae FostersB 3679 1022 0.28 765874 Corynebacterium pseudotuberculosis FRC41 2110 607 0.29 766178 Ictalurid herpesvirus 1 (strain Auburn) 76 10 0.13 766180 White bream virus (strain DF24/00) 5 5 1.00 766182 Torque teno virus 1 (isolate TA278) 2 1 0.50 766183 Torque teno mini virus 1 (isolate TLMV-CBD279) 3 1 0.33 766184 Torque teno midi virus 1 (isolate MD1-073) 2 1 0.50 766185 Torque teno tupaia virus (isolate Tbc-TTV14) 3 1 0.33 766186 Torque teno tamarin virus (isolate So-TTV2) 4 1 0.25 766187 Torque teno douroucouli virus (isolate At-TTV3) 3 1 0.33 766188 Torque teno felis virus-Fc-TTV4 3 1 0.33 766189 Torque teno canis virus (isolate Cf-TTV10) 3 1 0.33 766190 Torque teno sus virus 1 (isolate Sd-TTV31) 3 1 0.33 766191 Cryptosporidium parvum virus 1 (strain KSU-1) 2 1 0.50 766192 Canine oral papillomavirus (strain Y62) 7 6 0.86 766194 Dugbe virus (isolate ArD44313) 3 2 0.67 768065 Haloquadratum walsbyi C23 2729 494 0.18 768066 Halomonas elongata DSM 2581 3471 1253 0.36 768670 Calditerrivibrio nitroreducens DSM 19672 2089 730 0.35 771870 Sordaria macrospora k-hell 9891 2021 0.20 795797 Halalkalicoccus jeotgali B3 3779 621 0.16 796210 La Crosse virus L78 4 2 0.50 857087 Methylomonas methanica MC09 4435 1225 0.28 857306 PRRSV SD 01-08 8 8 1.00 861557 Pyrenophora teres f. teres 0-1 11705 2207 0.19 862908 Bacteriovorax marinus SJ 3229 754 0.23 862962 Bacteroides fragilis 638R 4284 1196 0.28 862965 Haemophilus parainfluenzae T3T1 1973 765 0.39 866775 Aerococcus urinae ACS-120-V-Col10a 1684 546 0.32 868131 Methanobacterium sp. SWAN-1 2394 474 0.20 868132 Methanobacterium sp. AL-21 2493 548 0.22 868565 Human herpesvirus 8 strain GK18 86 23 0.27 871271 Candidatus Zinderia insecticola CARI 206 118 0.57 871575 Ogataea parapolymorpha DL-1 4171 1404 0.34 871585 Acinetobacter calcoaceticus PHEA-2 3598 1073 0.30 876142 Encephalitozoon intestinalis ATCC 50506 1829 545 0.30 880591 Ketogulonicigenium vulgare Y25 3209 965 0.30 880724 Methanotorris igneus Kol 5 1753 364 0.21 882210 Maize chlorotic mottle virus Kansas/1987 4 1 0.25 887061 Methylovorus sp. MP688 2709 951 0.35 903503 Candidatus Moranella endobia PCIT 405 251 0.62 909420 Neisseria meningitidis H44/76 2946 789 0.27 909946 Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 4826 1709 0.35 914672 Nodamura virus Mag115 3 1 0.33 926569 Anaerolinea thermophila UNI-1 3110 785 0.25 926570 Acidiphilium multivorum AIU301 3858 1005 0.26 927666 Streptococcus oralis Uo5 1907 601 0.32 928296 Borna disease virus strain V 5 5 1.00 928297 Bovine ephemeral fever virus strain BB7721 12 7 0.58 928299 Cowpea mosaic virus strain SB 5 4 0.80 928300 Cricket paralysis virus Teleogryllus commodus/Australia/CrPVVIC/1968 2 1 0.50 928301 Fowlpox virus strain NVSL 251 63 0.25 928302 Hepatitis B virus C/ayr human/Japan/Okamoto 5 4 0.80 928303 Hendra virus horse/Australia/Hendra/1994 9 5 0.56 928304 Lettuce necrotic yellows virus isolate 318 6 5 0.83 928305 Maize mosaic virus maize/USA/Reed/2005 6 5 0.83 928306 Moloney murine leukemia virus isolate Shinnick 3 3 1.00 928313 Tacaribe virus strain Franze-Fernandez 4 4 1.00 928314 Yaba monkey tumor virus strain VR587 140 17 0.12 930944 Yersinia enterocolitica subsp. palearctica Y11 4391 1603 0.37 932677 Pantoea ananatis AJ13355 4060 1574 0.39 936153 Enterococcus faecalis 62 3010 860 0.29 936155 Helicobacter felis ATCC 49179 1649 516 0.31 936156 Bacillus subtilis BSn5 4145 1162 0.28 937773 Staphylococcus pseudintermedius HKU10-03 2449 769 0.31 937774 Taylorella equigenitalis MCE9 1556 551 0.35 940190 Melissococcus plutonius ATCC 35311 1876 589 0.31 953739 Streptomyces venezuelae ATCC 10712 7451 1567 0.21 979556 Microbacterium testaceum StLB037 3671 943 0.26 984892 Staphylococcus pseudintermedius ED99 2346 764 0.33 985053 Vulcanisaeta moutnovskia 768-28 2318 402 0.17 985895 Leptosphaeria maculans JN3 12468 2122 0.17 990316 Methanosaeta concilii GP6 2791 450 0.16 994484 Pseudomonas brassicacearum subsp. brassicacearum NFM421 6081 1954 0.32 998820 Lactobacillus casei BD-II 3166 837 0.26 999378 Lactobacillus casei LC2W 3119 834 0.27 999809 Sporisorium reilianum SRZ2 6673 1695 0.25 999953 Trypanosoma brucei brucei strain 927/4 GUTat10.1 8774 1384 0.16 1002809 Solibacillus silvestris StLB046 3812 1002 0.26 1005059 Cocksfoot mottle virus Dactylis glomerata/Norway/CfMV-NO/1995 4 3 0.75 1005060 Groundnut rosette virus MC1 3 1 0.33 1016998 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 5559 1674 0.30 1017264 Bordetella pertussis CS 3274 1144 0.35 1028307 Enterobacter aerogenes KCTC 2190 4909 1791 0.36 1033837 Lactobacillus kefiranofaciens ZW3 2134 606 0.28 1045854 Weissella koreensis KACC 15510 1346 459 0.34 1046629 Streptococcus salivarius 57.I 1933 618 0.32 1048332 Streptococcus salivarius CCHSS3 1999 640 0.32 1051072 Streptococcus equi subsp. zooepidemicus ATCC 35246 2063 613 0.30 1064592 Naumovozyma castellii CBS 4309 5565 1658 0.30 1077587 Influenza B virus (B/Victoria/2/1987) 15 6 0.40 1111708 Synechocystis sp. PCC 6803 substr. Kazusa 3507 1015 0.29